EY659660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG3_MAIZE (Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TUBG3 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.975e-43 Identity = 91/258 (35.27%), Postives = 146/258 (56.59%), Query Frame = 2 Query: 53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTA-RGSQQYRALTIPELTQXMWDSKNMMCAADPR-----HGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805 GAGN WA G Y +G + +D ++D+V +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+NP+F N L+ST MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R R T+ ++ + + +KN+M ++ R +Y++ + +G++ V E + ++ + F++W P Sbjct: 51 GAGNNWASG-YHQGEQFVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWAP 307
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.702e-42 Identity = 97/289 (33.56%), Postives = 158/289 (54.67%), Query Frame = 2 Query: 53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTA-RGSQQYRALTIPELTQXMWDSKNMMCAADPRH-----GRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNPPYVNSRVWDIPPLGYQCRQRLLGILPPSKKS 898 GAGN WA G Y +G + + ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L LTNP+F N L+ST MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R T+ ++ + + +KN+M ++ R+ +Y++ + +G++ V E + ++ + F+EW P + + P Q R+ G++ S S Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPY-VQTAHRVSGLMLASHTS 385
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG1_DROME (Tubulin gamma-1 chain OS=Drosophila melanogaster GN=gammaTub23C PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 2.222e-42 Identity = 96/286 (33.57%), Postives = 159/286 (55.59%), Query Frame = 2 Query: 53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARG---SQQ---YRALTIPELTQXMWDSKNMMCAADP---RHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNPPYVNSRVWDIPPLGYQCRQRLLGIL 880 GAGN WA G Y++G +L + V D++ +EA+ D L+GF +CH + ++ + YP +++ TFSVFP+ ++SD VV+PYN+ L++ +L AD +VLDN AL I L + NPSF +N+L+ST MS T LR+P +N++L L LIP P+LHF M G+ PLT+ +QQ R T+ ++ + + KNMM + P H Y++ + +G++ V + + ++++ + F+ W P + + P Q R+ G++ Sbjct: 99 GAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPY-VQSNHRVSGLM 382
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.902e-42 Identity = 96/289 (33.22%), Postives = 158/289 (54.67%), Query Frame = 2 Query: 53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTA-RGSQQYRALTIPELTQXMWDSKNMMCAADPRH-----GRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNPPYVNSRVWDIPPLGYQCRQRLLGILPPSKKS 898 GAGN WA G Y +G + + ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L LTNP+F N L+ST MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R T+ ++ + + +KN+M ++ R+ +Y++ + +G++ V E + ++ + F++W P + + P Q R+ G++ S S Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPY-VQTSHRVSGLMLASHTS 385
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.902e-42 Identity = 91/258 (35.27%), Postives = 145/258 (56.20%), Query Frame = 2 Query: 53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTA-RGSQQYRALTIPELTQXMWDSKNMMCAADPR-----HGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805 GAGN WA G Y +G + +D ++D+V +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+NP+F N L+ST MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R R T+ ++ + + +KN+M ++ R +Y++ + +G++ V E + ++ + F+ W P Sbjct: 99 GAGNNWASG-YHQGEQFVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIYWAP 355
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.951e-42 Identity = 85/254 (33.46%), Postives = 147/254 (57.87%), Query Frame = 2 Query: 50 NGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQ--QYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805 +GAGN WAKG Y EGA+ + +++++ +EA+ D L+GF + H + K+ + YP +++ T+SVFP+ +D VV+PYN LS+ +LV NAD +VLDN A+ I LKL +P+ +N ++ST M+ T LR+PG +N+DL L +L+P PR HF M G+ PL+ + R T+ ++ + + ++N+M + + G Y++ + +G + V + + ++ +N + F+ W P Sbjct: 98 DGAGNNWAKG-YCEGAKYEEEIIEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLEKLNDHYPKKLVQTYSVFPND--NDIVVQPYNCILSMKRLVLNADCVVVLDNTAITSIAVDRLKLLHPTISQVNSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLNDQKVSSIRKTTVLDVMRRLLQTRNIMTSGAIKKGAYMSILNIIQGDVDPTQVHKSLQRIRERNVANFIPWGP 348
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG2_BOVIN (Tubulin gamma-2 chain OS=Bos taurus GN=TUBG2 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.951e-42 Identity = 88/256 (34.38%), Postives = 147/256 (57.42%), Query Frame = 2 Query: 53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGS-QQYRALTIPELTQXMWDSKNMMCAAD---PRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805 GAGN WA G +++G ++ + + D++ +EA+ D L+GF +CH + ++ + YP +++ T+SVFP+ ++SD VV+PYN+ L++ +L +NAD +VLDN AL I L + NPSF +N L+ST MS T LR+PG +N+DL L +LIP PRLHF M G+ PLT S R T+ ++ + + KN+M + + Y+ + +G++ V + + ++ + + F+ W P Sbjct: 99 GAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGP 353
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG1_HUMAN (Tubulin gamma-1 chain OS=Homo sapiens GN=TUBG1 PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 4.951e-42 Identity = 88/256 (34.38%), Postives = 147/256 (57.42%), Query Frame = 2 Query: 53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGS-QQYRALTIPELTQXMWDSKNMMCAAD---PRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805 GAGN WA G +++G ++ + + D++ +EA+ D L+GF +CH + ++ + YP +++ T+SVFP+ ++SD VV+PYN+ L++ +L +NAD +VLDN AL I L + NPSF +N L+ST MS T LR+PG +N+DL L +LIP PRLHF M G+ PLT S R T+ ++ + + KN+M + + Y+ + +G++ V + + ++ + + F+ W P Sbjct: 99 GAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGP 353
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG1_BOVIN (Tubulin gamma-1 chain OS=Bos taurus GN=TUBG1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.951e-42 Identity = 88/256 (34.38%), Postives = 147/256 (57.42%), Query Frame = 2 Query: 53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGS-QQYRALTIPELTQXMWDSKNMMCAAD---PRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805 GAGN WA G +++G ++ + + D++ +EA+ D L+GF +CH + ++ + YP +++ T+SVFP+ ++SD VV+PYN+ L++ +L +NAD +VLDN AL I L + NPSF +N L+ST MS T LR+PG +N+DL L +LIP PRLHF M G+ PLT S R T+ ++ + + KN+M + + Y+ + +G++ V + + ++ + + F+ W P Sbjct: 99 GAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGP 353
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG2_HUMAN (Tubulin gamma-2 chain OS=Homo sapiens GN=TUBG2 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.466e-42 Identity = 88/256 (34.38%), Postives = 146/256 (57.03%), Query Frame = 2 Query: 53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFP-SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGS-QQYRALTIPELTQXMWDSKNMMCAAD---PRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805 GAGN WA G +++G ++ + + D++ +EA+ D L+GF +CH + ++ + YP +++ T+SVFP ++SD VV+PYN+ L++ +L +NAD +VLDN AL I L + NPSF +N L+ST MS T LR+PG +N+DL L +LIP PRLHF M G+ PLT S R T+ ++ + + KN+M + + Y+ + +G++ V + + ++ + + F+ W P Sbjct: 99 GAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGP 353 The following BLAST results are available for this feature:
BLAST of EY659660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659660 ID=EY659660; Name=EY659660; organism=Citrus sinensis; type=EST; length=922bpback to top |