EY659660

Overview
NameEY659660
Unique NameEY659660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG_ANEPH (Tubulin gamma chain OS=Anemia phyllitidis GN=TUBG PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.219e-40
Identity = 94/290 (32.41%), Postives = 159/290 (54.83%), Query Frame = 2
Query:   53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQ-LVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTA-RGSQQYRALTIPELTQXMWDSKNMMCAADPR-----HGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNPPYVNSRVWDIPPLGYQCRQRLLGILPPSKKS 898
            GAGN WA G Y +G ++ + ++D++ +EA+  D L+GF +CH              +  + + Y  +++ T+SVFP+  + SD VV+PYN+ L++++ L  NAD  +VLDN AL  I    L + NP+F   N L+ST MS  T  LR+PG +N+DL  L  +LIP PR HF M G+ PLT  R +   R  T+ ++ + +  +KN+M ++  R       +Y++   + +G++    V + +  ++ +  + F+EW P  +   +    P   Q   R+ G++  S  S
Sbjct:   99 GAGNNWASG-YHQGEQVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLNKRLTINADCVVVLDNTALNRIAVDRLHIPNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTVERQANAIRKTTVLDVMRRLLQAKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHKSLQRIRERKLANFIEWGPASIQVALSRKSPY-VQTAHRVSGLMLASHTS 386          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.080e-40
Identity = 84/254 (33.07%), Postives = 142/254 (55.91%), Query Frame = 2
Query:   53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQY---RALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            GAGN W +G YT+  ++ D +L+++ +EA+  D L+GF + H              + +I + YP +++ T+SVFP    +D VV+PYN  LS+ +L  NAD  +VLDN AL  I    LK+  P+F  +N ++ST M+  T  LR+PG +N+D+  L  +L+P PR HF M G+ PL+    Q+Y   R  T  ++ + +  +KN+M     + G Y++   + +G +    V + +  ++ +  + F+ W P
Sbjct:   99 GAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERINDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSL--DQKYTSVRKTTFLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIKERKLANFIPWGP 347          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA3_CHICK (Tubulin alpha-3 chain (Fragment) OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.080e-40
Identity = 79/223 (35.43%), Postives = 126/223 (56.50%), Query Frame = 2
Query:  137 AENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            A+ C  LQGF + H              + ++  EY  +  + FSV+P  +VS  VVEPYN+ L+ H  +E++D   ++DNEA+YDIC R L +  P++ +LN LI   +S VT  LRF G LN DL +   NL+P+PR+HF +  +A + +     +  L++PE+T   ++  N M   DPR G+Y+    ++RG +  K V+  +  ++ + S  FV+W P
Sbjct:    1 ADQCSGLQGFLVFHSFGGGTGSGFTSLLMERLSVEYSKKSKLEFSVYPDRQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICNRNLDIERPTYTNLNRLIGQIVSSVTASLRFNGALNVDLIEFQTNLVPYPRIHFPLTTYARIISAEKAYHEQLSVPEITNACFEFSNQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIAAIKTRRSIQFVDWCP 223          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.717e-40
Identity = 81/252 (32.14%), Postives = 141/252 (55.95%), Query Frame = 2
Query:   53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTA-RGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            GAGN W +G YT+  ++ D +L+++ +EA+  D L+GF + H              + ++ + YP +++ T+SVFP    +D VV+PYN  LS+ +L  NAD  +VLDN AL  I    LK+  P+F  +N ++ST M+  T  LR+PG +N+D+  L  +L+P PR HF M G+ PL+  +     R  T+ ++ + +  +KN+M     + G Y++   + +G +    V + +  ++ +  + F+ W P
Sbjct:   99 GAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFNSVRKTTVLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIRERKLANFIPWGP 347          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.548e-40
Identity = 81/252 (32.14%), Postives = 141/252 (55.95%), Query Frame = 2
Query:   53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTA-RGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            GAGN W +G YT+  ++ D +L+++ +EA+  D L+GF + H              + ++ + YP +++ T+SVFP    +D VV+PYN  LS+ +L  NAD  +VLDN AL  I    LK+  P+F  +N ++ST M+  T  LR+PG +N+D+  L  +L+P PR HF M G+ PL+  +     R  T+ ++ + +  +KN+M     + G Y++   + +G +    V + +  ++ +  + F+ W P
Sbjct:   99 GAGNNWGRG-YTDAEKVQDEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFTSVRKTTVLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIRERKLANFIPWGP 347          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 6.052e-40
Identity = 78/252 (30.95%), Postives = 142/252 (56.35%), Query Frame = 2
Query:   53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTA-RGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            GAGN WA G Y +G    D + D++ +EA+  + L+GF + H              + ++ + +P +++ T+SVFP    S  VV+ YN+ L++ +L+ENAD  +VLDN AL+ I    L++  P+    N L+ST MS  T  LR+PG +N+DL  +  +LIP P+ HF + G+ PL+  R ++  R  ++ ++ + +   +N+M +A  + G+Y++   + +G +    +   +  ++ K  + F++W P
Sbjct:   99 GAGNNWANG-YKQGESFYDDIFDMIDREADGSESLEGFLLTHSISGGTGSGMGSYILERLNDRFPKKIIQTYSVFPDD--SSVVVQQYNSVLTLKRLIENADSTVVLDNNALHRIVGENLRIDQPTMDQTNSLVSTVMSASTTTLRYPGYMNNDLVGMLASLIPTPKCHFLITGYTPLSIDRQTESVRKTSVLDVMRRLLQPQNIMVSAPTKTGKYISILNIIQGDVDPTQIHNSLQRIREKRMATFIDWGP 347          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.761e-39
Identity = 82/256 (32.03%), Postives = 143/256 (55.86%), Query Frame = 2
Query:   53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFP-SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRAL---TIPELTQXMWDSKNMMCAADP-RHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            GAGN WA G Y+    + + ++D++ +EA+  D L+GF + H              + ++ + YP +++ T+SVFP S  VSD VV+PYN+ L++ +L  NAD  +VLDN AL  I    L   NP+F   N L+ST MS  T  LR+PG +N+DL  +  +LIP PR HF +  + P T +  ++ +A+   T+ ++ + +   KN M + +P +   +++   + +G+     V + ++ ++ +  + F+ W P
Sbjct:   99 GAGNNWANG-YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGP 353          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.300e-39
Identity = 81/256 (31.64%), Postives = 143/256 (55.86%), Query Frame = 2
Query:   53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPK-VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRAL---TIPELTQXMWDSKNMMCAADP-RHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            GAGN WA G Y    ++ + ++D++ +EAE  D L+GF + H              + ++ + +P +++ T+SVFP+ + VSD VV+PYN+ L++ +L  NAD  +VLDN AL  I    L + NP+F   N L+ST MS  T  LR+PG +N+DL  +  +LIP PR HF    + P T++  +  R +   T+ ++ + +   KN M + +P +   +++   + +G+     V + ++ ++ +  + F+ W P
Sbjct:   99 GAGNNWAHG-YAHAEKIFEDIVDMIDREAEGSDSLEGFSLLHSIAGGTGSGLGSYLLERLNDRFPKKIVQTYSVFPNNRSVSDVVVQPYNSLLTLKRLTLNADAVVVLDNAALAHIAADRLHIQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPTPRCHFLSTSYTPFTSQQVEDARTIRKTTVLDVMRRLLQPKNRMVSVNPGKQSCFISILNIIQGEADPNDVHKSLLRIRERKLATFIPWGP 353          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.300e-39
Identity = 80/253 (31.62%), Postives = 142/253 (56.13%), Query Frame = 2
Query:   53 GAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQ--QYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            GAGN W +G Y +  ++ + +++++ +EA+  D L+GF + H              + ++ + YP +++ T+SVFP+   +D VV+PYN  LS+ +L+ NAD  +VLDN AL  I    LKL  P+F  +N ++ST M+  T  LR+PG +N+DL  L  +L+P PR HF M G+ PL+    +    R  T+ ++ + +  +KN+M     + G Y++   + +G +    V + +  ++ +  + F+ W P
Sbjct:   99 GAGNNWGRG-YCDAEKVQEEIIEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPNE--NDVVVQPYNCLLSMKRLILNADCVVVLDNTALTSIAVDRLKLLQPTFPQINSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLIDQKVTSVRKTTVLDVMRRLLQTKNIMATGAIKKGAYMSILNIIQGDVDPTQVHKSLQRIRERKLANFIPWGP 348          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBG_EMENI (Tubulin gamma chain OS=Emericella nidulans GN=mipA PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.691e-39
Identity = 84/264 (31.82%), Postives = 139/264 (52.65%), Query Frame = 2
Query:   32 NFVFGQNG--AGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQ---YRALTIPELTQXMWDSKNMMCAADP-RHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            NF  GQ G  AGN W  G Y  G  + + V D++ +EA+  D L+GF   H              + ++ + +P +++ T+SVFP  + +D VV PYN+ L++ +L +NAD  +VLDN AL  I    L +  PSF   N L+ST MS  T  LR+PG +++DL  +  +LIP PR HF +  + P T     Q    R  T+ ++ + +   KN M + +P +   Y++   + +G+     V + ++ ++ +  + F+ W P
Sbjct:   90 NFFIGQQGIGAGNNWGAG-YAAGEVVQEEVFDMIDREADGSDSLEGFMFLHSIAGGTGSGLGSFLLERMNDRFPKKLIQTYSVFPDTQAADVVVNPYNSLLAMRRLTQNADSVVVLDNAALSRIVADRLHVQEPSFQQTNRLVSTVMSASTTTLRYPGYMHNDLVGIIASLIPTPRSHFLLTSYTPFTGDNIDQAKTVRKTTVLDVMRRLLQPKNRMVSINPSKSSCYISILNIIQGEADPTDVHKSLLRIRERRLASFIPWGP 352          
The following BLAST results are available for this feature:
BLAST of EY659660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
TBG_ANEPH1.219e-4032.41Tubulin gamma chain OS=Anemia phyllitidis GN=TUBG ... [more]
TBG_EUPAE2.080e-4033.07Tubulin gamma chain OS=Euplotes aediculatus PE=2 S... [more]
TBA3_CHICK2.080e-4035.43Tubulin alpha-3 chain (Fragment) OS=Gallus gallus ... [more]
TBG1_EUPOC2.717e-4032.14Tubulin gamma-1 chain OS=Euplotes octocarinatus PE... [more]
TBG2_EUPOC3.548e-4032.14Tubulin gamma-2 chain OS=Euplotes octocarinatus PE... [more]
TBG_DICDI6.052e-4030.95Tubulin gamma chain OS=Dictyostelium discoideum GN... [more]
TBG_SCHPO1.761e-3932.03Tubulin gamma chain OS=Schizosaccharomyces pombe G... [more]
TBG_SCHJP2.300e-3931.64Tubulin gamma chain OS=Schizosaccharomyces japonic... [more]
TBG1_EUPCR2.300e-3931.62Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=... [more]
TBG_EMENI6.691e-3931.82Tubulin gamma chain OS=Emericella nidulans GN=mipA... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659660 ID=EY659660; Name=EY659660; organism=Citrus sinensis; type=EST; length=922bp
GCCGGNATTCCAAGGCCGACCCACGCGTCCGAATTTTGTTTTTGGCCAAA
ATGGTGCTGGAAACACCTGGGCCAAGGGGCACTACACCGAAGGAGCTGAA
TTGATTGATTCAGTTCTTGATGTTGTTCGTAAAGAAGCTGAGAATTGTGA
CTGCCTACAAGGCTTTCAGATTTGCCACTCACTTGGAGGGGGGACTGGAT
CAGGAATGGGAACTCTACTGATATCAAAGATTAGAGAAGAATATCCTGAT
CGTATGATGATGACCTTTTCCGTTTTCCCATCACCTAAAGTCTCTGACAC
AGTTGTTGAGCCTTACAACGCCACACTCTCTGTGCACCAGCTTGTTGAAA
ATGCCGATGAGTGTATGGTCCTTGACAATGAAGCTCTCTACGATATCTGC
TTTCGAACTCTCAAGCTCACAAATCCCAGCTTTGGTGATCTGAACCATTT
GATCTCAACAACAATGAGTGGAGTAACATGCTGCCTTCGTTTCCCCGGCC
AACTCAACTCTGATCTTCGGAAATTAGCCGTAAACTTGATCCCATTCCCA
CGCCTGCACTTTTTCATGGTTGGTTTTGCGCCCTTAACAGCTCGCGGGTC
ACAGCAGTACCGCGCTCTGACAATTCCTGAGCTTACTCAACANATGTGGG
ATTCTAAAAACATGATGTGCGCTGCTGATCCTCGCCATGGTAGGTATTTG
ACTGCCTNCGCAATGTTCCGAGGCAAAATGAGTACAAAGGGAGTTGACGA
ACATATGATCAATGTACAAAACAAGAATTCTTCATACTTTGTTGAGTGGA
ATCCGCCATATGTTAACTCAAGGGTTTGGGACATTCCCCCACTGGGGTAT
CAATGTCGGCAACGTTTATTGGGGATTCTACCTCCATCCAAGAAAAGTTC
AGGCGTGGTTCAGAACAATTCC
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