EY659646

Overview
NameEY659646
Unique NameEY659646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1053 contig Csv1_Contig1053:241..834. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: NACB_ASPCL (Nascent polypeptide-associated complex subunit beta OS=Aspergillus clavatus GN=egd1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.227e-19
Identity = 49/110 (44.55%), Postives = 78/110 (70.91%), Query Frame = 1
Query:    1 QKVSEHLEEIGLNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 327
            +K+   L+++ +  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q     +  GA   +++D+D++P+LV
Sbjct:   46 KKLQTTLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNM-QKSQAGAEGKKDEDEDDIPDLV 154          
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: BTF3_CAEEL (Transcription factor BTF3 homolog OS=Caenorhabditis elegans GN=icd-1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.227e-19
Identity = 49/110 (44.55%), Postives = 75/110 (68.18%), Query Frame = 1
Query:    1 QKVSEHLEEIGLNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 327
            +K+  +L+++ +  IP IEEVN+ KDD  VI F NPKVQ S+ ANT+ V+G+   K++ ++LPGI+NQLGP++L +L+KLA    K  P+         + +D++VPELV
Sbjct:   44 KKLQSNLKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGSADNKQITEMLPGILNQLGPESLTHLKKLANNVTKLGPDG--------KGEDEDVPELV 145          
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: NACB_MAGGR (Nascent polypeptide-associated complex subunit beta OS=Magnaporthe grisea GN=EGD1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.093e-19
Identity = 50/110 (45.45%), Postives = 75/110 (68.18%), Query Frame = 1
Query:    1 QKVSEHLEEIGLNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 327
            +K+ + L+++ +  I AIEEVN+FK D  VI F  PKV A++ ANT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G      +E DDD++P+LV
Sbjct:   39 KKLQQTLKKLNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPANTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQNMQKADG-----DKEADDDDIPDLV 143          
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: NACB_CHAGB (Nascent polypeptide-associated complex subunit beta OS=Chaetomium globosum GN=EGD1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.093e-19
Identity = 49/110 (44.55%), Postives = 75/110 (68.18%), Query Frame = 1
Query:    1 QKVSEHLEEIGLNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 327
            +K+ + L+++ +  I AIEEVN+FK D  VI F  PKV A++ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q             ++DDDDE+P+LV
Sbjct:   40 KKLQQSLKKLNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQNM---------QQKKDDDDEIPDLV 140          
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: NACB_GIBZE (Nascent polypeptide-associated complex subunit beta OS=Gibberella zeae GN=EGD1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18
Identity = 49/110 (44.55%), Postives = 72/110 (65.45%), Query Frame = 1
Query:    1 QKVSEHLEEIGLNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 327
            +K+   L+++    I AIEEVN+FK D  VI F  PKV A++ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G        +DDDE+P+LV
Sbjct:   49 KKLQLALKKLNTQPIQAIEEVNMFKQDGNVIHFAAPKVHAAVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQNLQKEKG--------EDDDEIPDLV 150          
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: NACB_NEUCR (Nascent polypeptide-associated complex subunit beta OS=Neurospora crassa GN=egd-1 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.947e-18
Identity = 47/110 (42.73%), Postives = 74/110 (67.27%), Query Frame = 1
Query:    1 QKVSEHLEEIGLNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 327
            +K+   L+++ +  I AIEEVN+FK D  VI F  PKV A++ ANT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N        ++ ++D++P+LV
Sbjct:   40 KKLQATLKKVNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPANTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQNMQKN-------EKDAEEDDIPDLV 142          
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: NACB_CRYNE (Nascent polypeptide-associated complex subunit beta OS=Cryptococcus neoformans GN=EGD1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.947e-18
Identity = 52/121 (42.98%), Postives = 80/121 (66.12%), Query Frame = 1
Query:    1 QKVSEHLEEIGLNAIPAIEEVNIFKDDV-VIQFLNPKVQ--ASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQK--------QAPNAGTGAPTTQE-DDDDEVPELV 327
            +K+   L+++G+  I  +EEVN+FK+D  V+ F  P+VQ  A++ +NT  + G  QTK+L +++PGI+NQLGPD+L NLR+LAE +Q          A + G GA   +E + DDE+P+LV
Sbjct:   38 RKLQAALKKLGVQPITGVEEVNMFKEDGNVLHFGAPRVQVHAALPSNTLAIYGPGQTKELTELVPGILNQLGPDSLANLRRLAESYQSLTARQAAAAAGSGGEGAGEAKEGEGDDEIPDLV 158          
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: NACB_EMENI (Nascent polypeptide-associated complex subunit beta OS=Emericella nidulans GN=egd1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17
Identity = 50/122 (40.98%), Postives = 77/122 (63.11%), Query Frame = 1
Query:    1 QKVSEHLEEIGLNAIPAIEEVNIFKDDV-VIQFLNPK------------VQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPELV 327
            +K+   L+++ +  I AIEEVN+FK+D  VI F  PK            V AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N    A   ++DD+D++P+LV
Sbjct:   37 KKLQATLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKEERALTVGCEIKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKNQ---AGEKKDDDEDDIPDLV 155          
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: BT3L3_HUMAN (Transcription factor BTF3 homolog 3 OS=Homo sapiens GN=BTF3L3 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17
Identity = 48/109 (44.04%), Postives = 72/109 (66.06%), Query Frame = 1
Query:    1 QKVSEHLEEIGLNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGTGAPTTQEDDDDEVPEL 324
            +K+   L+++ +N I  IE+VN+F +   VI F NPK QAS+A NT+ ++G  + K++ ++LP +++QLG D+L +LR+LAE   KQ P  G     T  DDDD VPEL
Sbjct:   72 KKLQFSLKKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLRRLAEVLPKQ-PVDGKAPLATGGDDDDGVPEL 179          
BLAST of EY659646 vs. ExPASy Swiss-Prot
Match: NACB_USTMA (Nascent polypeptide-associated complex subunit beta OS=Ustilago maydis GN=EGD1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.166e-16
Identity = 46/110 (41.82%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    4 KVSEHLEEIGLNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ-KQAPNAGTGAPTTQEDDDDEVPELV 327
            K+   L+++ +  +  +EEVN+FK+D  V+ F  PKV     +NT+ V G    K+L +++PGI+NQLGPD+L +LRKLAE +Q   A +A + A      DDD+VP++V
Sbjct:   40 KLQAALKKLQVEPVSGVEEVNMFKEDGNVLHFAAPKVHGLPTSNTFAVYGNGVDKELTELVPGILNQLGPDSLASLRKLAESYQAMNAQHAASQAAAAGTKDDDDVPDVV 149          
The following BLAST results are available for this feature:
BLAST of EY659646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
NACB_ASPCL1.227e-1944.55Nascent polypeptide-associated complex subunit bet... [more]
BTF3_CAEEL1.227e-1944.55Transcription factor BTF3 homolog OS=Caenorhabditi... [more]
NACB_MAGGR2.093e-1945.45Nascent polypeptide-associated complex subunit bet... [more]
NACB_CHAGB2.093e-1944.55Nascent polypeptide-associated complex subunit bet... [more]
NACB_GIBZE3.022e-1844.55Nascent polypeptide-associated complex subunit bet... [more]
NACB_NEUCR3.947e-1842.73Nascent polypeptide-associated complex subunit bet... [more]
NACB_CRYNE3.947e-1842.98Nascent polypeptide-associated complex subunit bet... [more]
NACB_EMENI4.364e-1740.98Nascent polypeptide-associated complex subunit bet... [more]
BT3L3_HUMAN4.364e-1744.04Transcription factor BTF3 homolog 3 OS=Homo sapien... [more]
NACB_USTMA2.166e-1641.82Nascent polypeptide-associated complex subunit bet... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659646 ID=EY659646; Name=EY659646; organism=Citrus sinensis; type=EST; length=593bp
CAGAAGGTTTCAGAGCACCTTGAAGAGATAGGACTGAATGCTATTCCTGC
AATTGAGGAAGTTAACATTTTCAAGGATGACGTCGTTATTCAGTTCTTAA
ATCCCAAAGTACAAGCTTCAATTGCTGCCAACACATGGGTAGTTAGTGGT
GCCCCACAAACCAAGAAGTTGCAGGATATTCTCCCTGGAATTATCAATCA
ATTGGGGCCAGATAATTTGGACAACCTGAGGAAGTTGGCGGAGCAGTTTC
AGAAGCAAGCACCTAATGCAGGAACTGGTGCACCCACGACTCAAGAGGAC
GACGACGATGAGGTCCCAGAGCTTGTGGCAGGCGAGACGTTTGAAGCTGC
CGCAGAGGAGAAAACAGAGAAACCTGACGCTGCTTCTTAGAGAGTTTTAT
CTAGAGGGACTTTGTGTTATTCTATATATTTTCTATGTTTTTTGAGCTTT
TATTTTACTTTTCCGAGTCAACTTTCTCTTGTTTTATCTGATTCTCCCTG
TGACACTAGATATTGTTACTTTTAATTCAATGTTTTGCTCCAGTGAAACC
AGTGAAAACCTTTTTACTCTTTCAAAAAAAAAAAAAAAAAAAA
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