EY659641

Overview
NameEY659641
Unique NameEY659641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length986
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659641_ssr332 microsatellite EY659641_ssr332:332..343. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.929e-27
Identity = 70/204 (34.31%), Postives = 104/204 (50.98%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLP----KTGEGAPFPRTHPWWGFNPGGTQDWATGGGPKKIDGSKGPFMVFTKTLIWRGAKV 877
            TF +++ VTW  +H+  +  G  + L +DQ+SG GF SK  Y  G   M+IK+  G++ G VTAFY+ S      DE+DFEFL N  G P T+QTN++ NG+G+RE+R  LWF+P        L    +Q  +++        +P    K   G  +P        +     DWAT GG  K++ S  PF+   +     G  +
Sbjct:   34 TFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGGG-HDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYV------DNIPIRVYKNENGVSYPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNI 230          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.521e-27
Identity = 67/182 (36.81%), Postives = 98/182 (53.85%), Query Frame = 2
Query:  290 DFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNPGGTQDWATGGGPKKIDGSKGPF 835
            ++ VTW   H+ ++  G+ +QL +D +SG GF SK  Y  G   M+IKL P DSAG VTAFY+ S  +   DE+DFEFL NR G P  +QTN+++NG+G REQ+   WFDP        +    +Q  +++              G  +P        +    ++WAT GG +KI+ +  PF
Sbjct:   35 NYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGD-THDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPF 215          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.898e-26
Identity = 68/185 (36.76%), Postives = 101/185 (54.59%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNPGGTQDWATGGGPKKIDGSKGPF 835
            F +++ VTW   ++ ++  G+ +QL LD +SG GF SK  Y  G   ++IK+ P D++G VTAFY+ S   N  DE+DFEFL N+ G    VQTN++ NGKG+REQ++ LWFDP        +    +Q   ++           T +G  +P        +    ++WAT GG  KI+ S  PF
Sbjct:   39 FDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSK-GNTHDEVDFEFLGNKEG-KLAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPF 221          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.099e-25
Identity = 74/207 (35.75%), Postives = 107/207 (51.69%), Query Frame = 2
Query:  275 ATFLEDFKVTWSDAHLRQIEGG---RAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG----*CAHQGLP----KTGEGAPFPRTHP-------WWGFNPGGTQDWATGGGPKKIDGSKGPFMV 841
            A F E F V  +  H+R +      + + L LD++SG GF SK  YLFG  S+++KLV G+SAGTVT+FY++S   +  DE+D EF+ N +G+PY + TN++ANG G +E +  LWFDP          + +   Y  +W           +P    K  +   +P++ P       W G        WAT  G  KID S  PF+V
Sbjct:   26 AGFYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDP----------TADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDG------SYWATRHGDVKIDWSGAPFVV 216          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.165e-20
Identity = 52/118 (44.07%), Postives = 68/118 (57.63%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLRNRTGHPYTVQTNIYANGKG--DREQRVNLWFDP 622
            F E +   + D +L     G++++L LD+ +G GF S   YL G  S  IKL    SAG V AFY+++    E   DE+DFEFL N  G  + +QTNIY NG     RE+R NLWFDP
Sbjct:   31 FDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDP 148          

HSP 2 Score: 28.1054 bits (61), Expect = 2.165e-20
Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 3
Query:  621 PAADYHLEHYSLETINHIGFYGDDVPIR 704
            P  D+H ++  L +++HI FY D+VPIR
Sbjct:  148 PTEDFH-QYSILWSLSHIIFYVDNVPIR 174          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.936e-19
Identity = 68/210 (32.38%), Postives = 96/210 (45.71%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLRNRTGHPYTVQTNIYANGK--GDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPR------THPWWGFNPGGTQDWATGGGPKKIDGSKGPFMVFTKTLIWRGAKV 877
            +F E +   + D +L   + G++++L LD+ +G GF S   YL G  S  IKL    +AG V AFYM++    E   DE+DFEFL N     + VQTNIY NG     RE+R NLWFDP       ++   +    +F+      +       G  FP       T  W G        WAT GG   ++    P++     L+  G  V
Sbjct:   30 SFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWDG------SKWATNGGKYGVNYKYAPYIARFSDLVLHGCPV 233          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 5.007e-19
Identity = 65/204 (31.86%), Postives = 93/204 (45.59%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLRNRTGHPYTVQTNIYANGK--GDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNPGGTQDWATGGGPKKIDGSKGPFMVFTKTLIWRGAKV 877
            +F E     + DA+L +     +++L+LD+ +G GF S   Y  G  S  IKL    +AG V AFY ++    E   DELD EFL N  G P+  QTN+Y NG     RE+R  LWFDP       ++    H+  +++      + +     GA +P              DWAT GG  K +    PF+   K+    G  V
Sbjct:   31 SFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSV 234          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 6.540e-19
Identity = 66/198 (33.33%), Postives = 93/198 (46.97%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV--RDELDFEFLRNRTGHPYTVQTNIYANGKGD-----REQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLP----KTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFM 838
            F  +F+  W   H R+ +    + L LD+++G GF S R Y  G     IKL PG +AG  T+ Y+++N E+    DE+D EFL    G PY++QTN++  G GD     RE +  LWFDP        +    +Q  +F+        +P         A FP T P W +       DWAT  G  K D    PF+
Sbjct:   39 FDREFRTLWGSQHQRREQD--VVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFV------DDVPIRTYNRKNEAIFP-TRPMWVYGSIWDASDWATENGRIKADYRYQPFV 227          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.231e-18
Identity = 63/192 (32.81%), Postives = 88/192 (45.83%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLRNRTGHPYTVQTNIYANGKGD-----REQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNPGGTQDWATGGGPKKIDGSKGPF 835
            F + F+  W   H R  +   A+ + LD+ SG GF S + +  G     IKL PG +AG +T+ Y+++N  +    DE+D EFL    G PYT+QTN+Y  G GD     RE +  LWFDP        +   + +   FL      +  PK    + FP    W   +      WAT  G  K D    PF
Sbjct:   43 FYKGFRNLWGPQHQRMDQN--ALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAIL-WSPREIIFLVDDIPIRRYPKK-SASTFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPF 230          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.364e-16
Identity = 61/193 (31.61%), Postives = 90/193 (46.63%), Query Frame = 2
Query:  314 AHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV---RDELDFEFLRNRTGHPYTVQTNIYANG--KGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNPGGTQDWATGGGPKKIDGSKGPFMVFTKTLIWRGAKV 877
            AH  Q+ G  A +L LD++SG G  SK +Y +G  S ++KL  G ++G V AFY+ SN E      DE+D E L       +T+QTN+YANG  +  RE++   WFDP       TL   +H   + +      Q   +    + +P              +WAT GG   ++    PF+V    +   G  V
Sbjct:   53 AHNIQVNGSLA-KLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYL-SNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYPSKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSV 243          
The following BLAST results are available for this feature:
BLAST of EY659641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH3_ARATH2.929e-2734.31Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH2_ARATH8.521e-2736.81Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH1.898e-2636.76Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ2.099e-2535.75Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH28_ARATH2.165e-2044.07Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH2.936e-1932.38Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH5.007e-1931.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH6.540e-1933.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH7.231e-1832.81Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH1.364e-1631.61Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659641 ID=EY659641; Name=EY659641; organism=Citrus sinensis; type=EST; length=986bp
TGGTNCGACCAGCCAGTTTCGGTGCCGGNATTCCCGGCCCCGACCCACGC
GTCCGTCTCCCGCGTCTATATAAATACACACTTCCCACAACGCTTCTAAA
CCATACTCAGCATACATAACCACAACATATAATTAAAGATCTCTTTCTAA
TTAGTAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTA
TCCTAAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCC
TGCTCTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGT
CACATGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCC
AGCTAGTTCTAGACCAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAG
TACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTC
TGCTGGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGA
GAGACGAGCTTGATTTTGAGTTCCTGAGAAACCGAACGGGGCATCCTTAC
ACGGTCCAAACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAG
AGTGAACCTCTGGTTTGACCCCTGCTGCAGATTATCACCTTGAACACTAT
TCTCTGGAAACCATCAACCATATTGGTTTCTATGGGGATGATGTGCCCAT
CAGGGGTTACCAAAAACAGGGGAAGGGGCTCCTTTTCCAAGAACCCACCC
CTGGTGGGGTTTCAACCCTGGGGGAACCCAAGACTGGGCAACAGGAGGGG
GGCCTAAAAAAATAGATGGGAGCAAAGGCCCTTTTATGGTTTTTACAAAG
ACTCTGATTTGGAGGGGGGCCAAGGTCCTGGACCACAAACTGGGCCTCGA
ACCGTGAACGGTGGGGGGGAAATAATTTAAACCTCCCCCGCTGGGAACAA
AAAAACAAGTGGTGGCCTTAAACCTGATCTTGTTTT
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