EY659639

Overview
NameEY659639
Unique NameEY659639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659639 vs. ExPASy Swiss-Prot
Match: ETR1_CUCMR (Ethylene receptor 1 OS=Cucumis melo var. reticulatus GN=ETR1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 4.845e-79
Identity = 143/215 (66.51%), Postives = 173/215 (80.47%), Query Frame = 3
Query:   42 IPNLFTTFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTNDNCMRVGMDGVILKPVSLDKMRSVFVHLSRHRVLFEST 683
            IP LFT FAQ   +  RNS GSGLGLAICKRFVNLMEGHIW+ESEGLGKGCTA FIVKLGI + SN+S L +  K+  +   T+FPGLKV+VMD+NGVSRSVTKGLL+HLGC+V T  S+EE  RVVS EH+VVFMD+C PG+DGYE+A+ I EKF + HERP +V LTG++D +T ++C+R GMDG+ILKPVS+DKMRSV   L   RVLFE++
Sbjct:  527 IPKLFTKFAQT-TVGPRNSGGSGLGLAICKRFVNLMEGHIWLESEGLGKGCTATFIVKLGIADQSNESKLPYTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHKVVFMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVLFETS 740          
BLAST of EY659639 vs. ExPASy Swiss-Prot
Match: ETR2_SOLLC (Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR2 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.365e-73
Identity = 136/207 (65.70%), Postives = 163/207 (78.74%), Query Frame = 3
Query:   45 PNLFTTFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTNDNCMRVGMDGVILKPVSLDKMRSVFVHLSRH 662
            P LF  FAQNQ  A +NS+G+GLGLAICKRFVNLMEGHIWIESEG+GKG TAIFIVKLGIP   N+S L F   +P  H Q  F GLKV+VMD+NG SR VTK LL+HLGCDV T+ S +EC R+++ EH+V+ MD  + G++ Y+VAV +HEKF +R ERPLIVALTG+TD +T +NC+RVGMDGVILKPVS+DKMRSV   L  H
Sbjct:  526 PKLFCKFAQNQEPATKNSAGTGLGLAICKRFVNLMEGHIWIESEGVGKGSTAIFIVKLGIPGRLNESKLPFTAGLPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLGCDVTTIGSGDECLRILTREHKVLIMDASITGMNCYDVAVSVHEKFGKRLERPLIVALTGNTDQVTKENCLRVGMDGVILKPVSIDKMRSVLSGLLEH 732          
BLAST of EY659639 vs. ExPASy Swiss-Prot
Match: EIN4_ARATH (Protein EIN4 OS=Arabidopsis thaliana GN=EIN4 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.692e-23
Identity = 67/187 (35.83%), Postives = 108/187 (57.75%), Query Frame = 3
Query:   93 NSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHGQTN--FPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSH---EHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTNDNCMRVGMDGVILKPVSLDKMRS 638
            N    GL L +C++   +M+G+IWI  +  G+  +   +++         S L+       H  +N    GL++ + D++ V+R+VTK LL  LGC+V  VSS  EC   +S+    ++VV +D+ +P +DG+EVA+ I  KF   H  PLI+ALT ST++   + C+++GM+G+I KPV L  M S
Sbjct:  571 NGIKEGLSLGMCRKLAQMMQGNIWISPKSHGQTQSMQLVLRFQTRPSIRRSILAGNAPELQHPNSNSILRGLRITLADDDDVNRTVTKRLLEKLGCEVTAVSSGFECLNALSNVEMSYRVVILDLQMPEMDGFEVAMKIR-KFCGHHW-PLIIALTASTEDHVRERCLQMGMNGMIQKPVLLHVMAS 755          
BLAST of EY659639 vs. ExPASy Swiss-Prot
Match: ETR2_ARATH (Ethylene receptor 2 OS=Arabidopsis thaliana GN=ETR2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.358e-19
Identity = 68/199 (34.17%), Postives = 100/199 (50.25%), Query Frame = 3
Query:   87 LRNSSGSGLG----LAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKL----GIPEHSNDSNLSFIPKMPVHGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVV-------SHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTNDNCMRVGMDGVILKPVSLDKMRS 638
            +R S G GLG      +CK+ V L+ G+I +     G   T   +++      I  H +  + +       H  +   GL+V+++D N  +R+VT+ LL  LGCDV  VSS  +C   +       S   QVV +D+ +  +DGYEVA+ I     R    PLIVA T S D    D C ++G++GV+ KPV L  M S
Sbjct:  567 VRFSGGYGLGQDLSFGVCKKVVQLIHGYISVVPGSDGSPETMSLLLRFRRRPSISVHGSSESPAPDHHAHPHSNSLLRGLQVLLVDTNDSNRAVTRKLLEKLGCDVTAVSSGFDCLTAIAPGSSSPSTSFQVVVLDLQMAEMDGYEVAMRI-----RSRSWPLIVATTVSLDEEMWDKCAQIGINGVVRKPVVLRAMES 760          
BLAST of EY659639 vs. ExPASy Swiss-Prot
Match: ERS1_ARATH (Ethylene response sensor 1 OS=Arabidopsis thaliana GN=ERS1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.175e-16
Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 3
Query:   42 IPNLFTTFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHGQT 287
            IP LFT F Q +    RN SG GLGLA+CKRFV LM G++WIESEGL KGCTA FI++LGI    + S+ S    +    QT
Sbjct:  527 IPLLFTKFVQPRTGTQRNHSGGGLGLALCKRFVGLMGGYMWIESEGLEKGCTASFIIRLGICNGPSSSSGSMALHLAAKSQT 608          
BLAST of EY659639 vs. ExPASy Swiss-Prot
Match: DHKK_DICDI (Hybrid signal transduction histidine kinase K OS=Dictyostelium discoideum GN=dhkK PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.033e-13
Identity = 56/211 (26.54%), Postives = 92/211 (43.60%), Query Frame = 3
Query:   51 LFTTFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEH-QVVFMDVCVPGIDGYEVAVHIHE-----KFTRRHERPLIVALTGSTDNLTNDNCMRVGMDGVILKPVSLDKMRSVFVHLSRHR 665
            +F  F Q      R   GSGLGL +C + V LM+G I + +     G T  FI+ L   E   D ++  +     H       +KV++ ++N +++ V    L  +G       +  E   ++  +H  ++FMD  +P +DG   +  I E     K+ R      I  LT +T +     C   GM+  I KP  L+++RS       H+
Sbjct:  995 IFEAFVQADPSDSRKYGGSGLGLYLCAKLVRLMKGEIGVYNNPDCDGSTFWFILPL---EEGTDQSMQQMNNGARHKAFPQDCVKVLIAEDNIINQRVAVKFLEKIGIKAEVAGNGNEVLEILERQHYDLIFMDFQMPILDGLRCSKTIREFEQNHKWNRICPSIFICGLTANTMSTDKKRCFDHGMNHFISKPFQLEQLRSAIEMAIEHK 1202          
BLAST of EY659639 vs. ExPASy Swiss-Prot
Match: LUXQ_VIBVY (Autoinducer 2 sensor kinase/phosphatase luxQ OS=Vibrio vulnificus (strain YJ016) GN=luxQ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.880e-13
Identity = 57/208 (27.40%), Postives = 90/208 (43.27%), Query Frame = 3
Query:   42 IPNLFTTFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECF-RVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTNDNCMRVGMDGVILKPVSLDKMRSVFVHLSRH 662
            + ++F  F Q  +++ R   GSGLGL I K  V ++EG I ++SE L KG T      L IP    +      P  P   Q    GLKV+++++N  +  + K         V  V    +   ++  H   ++ MD  +P + G E    I E  T +   P I A T      T    +  G + VI+KP+   ++    +H   H
Sbjct:  653 LESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQSE-LCKGST----FYLSIPVEKGECEEQKTPTNPKPEQLFGQGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHAFDLILMDNQLPKMGGIEATREIRE--TLKLGTP-IYACTADAQESTKQEFLSAGANRVIVKPIKEQELHDELLHFKAH 852          
BLAST of EY659639 vs. ExPASy Swiss-Prot
Match: LUXQ_VIBVU (Autoinducer 2 sensor kinase/phosphatase luxQ OS=Vibrio vulnificus GN=luxQ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.880e-13
Identity = 57/208 (27.40%), Postives = 90/208 (43.27%), Query Frame = 3
Query:   42 IPNLFTTFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECF-RVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTNDNCMRVGMDGVILKPVSLDKMRSVFVHLSRH 662
            + ++F  F Q  +++ R   GSGLGL I K  V ++EG I ++SE L KG T      L IP    +      P  P   Q    GLKV+++++N  +  + K         V  V    +   ++  H   ++ MD  +P + G E    I E  T +   P I A T      T    +  G + VI+KP+   ++    +H   H
Sbjct:  653 LESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQSE-LCKGST----FYLSIPVEKGECEEQKTPTNPKPEQLFGQGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHAFDLILMDNQLPKMGGIEATREIRE--TLKLGTP-IYACTADAQESTKQEFLSAGANRVIVKPIKEQELHDELLHFKAH 852          
BLAST of EY659639 vs. ExPASy Swiss-Prot
Match: LUXQ_VIBPA (Autoinducer 2 sensor kinase/phosphatase luxQ OS=Vibrio parahaemolyticus GN=luxQ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11
Identity = 56/220 (25.45%), Postives = 93/220 (42.27%), Query Frame = 3
Query:   42 IPNLFTTFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSN-----DSNLSFIPKMPVHGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDV-MTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTNDNCMRVGMDGVILKPVSLDKMRSVFVHLSRHRVLFEST 683
            +  +F  F Q +A   R   GSGLGL I K  V++++G + + S+   KG    F+V L + +        DS+    P      +     LKV+++++N  +  + K         V      +E    +  H + ++ MD  +P + G E    I +          I A T  T   T+D  M  G + V+LKP+  + +   FV   + R L E T
Sbjct:  651 LDEMFEPFVQEEATTTREYGGSGLGLTIVKNLVDMLDGDVQVRSQ---KGQGTTFVVTLPVKDRERVLAPLDSSQRVKP-----AELFDESLKVLLVEDNHTNAFILKAFCTKYKMQVDWAKDGLEAMEFLKDHSYDLILMDNQLPHLGGIETTKEIRQNLKLGTP---IYACTADTAQETSDAFMEAGANYVLLKPIKENALHEAFVDF-KQRFLIERT 858          
The following BLAST results are available for this feature:
BLAST of EY659639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ETR1_CUCMR4.845e-7966.51Ethylene receptor 1 OS=Cucumis melo var. reticulat... [more]
ETR2_SOLLC1.365e-7365.70Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR... [more]
EIN4_ARATH1.692e-2335.83Protein EIN4 OS=Arabidopsis thaliana GN=EIN4 PE=1 ... [more]
ETR2_ARATH7.358e-1934.17Ethylene receptor 2 OS=Arabidopsis thaliana GN=ETR... [more]
ERS1_ARATH1.175e-1654.88Ethylene response sensor 1 OS=Arabidopsis thaliana... [more]
DHKK_DICDI6.033e-1326.54Hybrid signal transduction histidine kinase K OS=D... [more]
LUXQ_VIBVY7.880e-1327.40Autoinducer 2 sensor kinase/phosphatase luxQ OS=Vi... [more]
LUXQ_VIBVU7.880e-1327.40Autoinducer 2 sensor kinase/phosphatase luxQ OS=Vi... [more]
LUXQ_VIBPA7.375e-1125.45Autoinducer 2 sensor kinase/phosphatase luxQ OS=Vi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659639 ID=EY659639; Name=EY659639; organism=Citrus sinensis; type=EST; length=895bp
ATTCAAAGGCCCGACCCACGCGTCCGATTAGCCTTTAANATATTCCAAAT
TTATTTACAACCTTTGCACAAAATCAAGCAATTGCACTAAGAAATTCTAG
TGGCAGTGGACTTGGCCTGGCAATTTGTAAGAGGTTTGTGAATCTTATGG
AGGGACATATCTGGATTGAAAGTGAAGGTCTTGGAAAGGGTTGTACTGCC
ATCTTCATTGTAAAACTTGGGATTCCGGAGCACTCAAATGATTCTAACCT
CTCCTTTATTCCAAAAATGCCGGTACACGGACAGACCAATTTTCCAGGGC
TTAAAGTAATTGTCATGGATGAAAATGGTGTTAGCAGGTCAGTGACTAAG
GGACTTCTGTTGCACCTGGGATGTGATGTAATGACGGTGAGCTCTGTTGA
GGAGTGCTTCCGAGTTGTTTCTCACGAACACCAGGTGGTCTTCATGGACG
TTTGCGTGCCTGGAATTGATGGTTATGAAGTCGCTGTCCATATACATGAA
AAATTTACGAGGCGTCATGAAAGGCCATTAATAGTAGCCCTTACTGGAAG
TACTGACAATTTGACCAACGATAATTGCATGAGGGTTGGAATGGATGGAG
TTATCCTAAAACCTGTTTCACTTGATAAAATGAGGAGTGTTTTCGTACAT
CTTTCGCGACACCGGGTTCTCTTTGAGTCCACGTAAAAACCGGAGATCGC
TCTACACCTTTTAGGGGGGCGGAAAAATCTTTTACGTAACGTGAGAGCTC
TCTCTACAGCCTTTCGCTTTTGGGCGATCCCACTTTGTGATGCAGCTTTC
AATACAGTGCGCCAAATACCAATGGACCCACAGGCGCGGCTCGTCATTAA
ACTCGCTTTTTTTGCAAATGTTATGACCGCACCGGCAAACAATAC
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