EY659632

Overview
NameEY659632
Unique NameEY659632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_YEAST (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces cerevisiae GN=EHD3 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.474e-19
Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = 2
Query:  182 RLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVGR--AFSAGGDLKMFYDGRNSKDSCLEVVYRM--YWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRL------PGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRL 724
            R++TLNRP++LN +++++   + + L ++ K D   LVI+K   R  +F AGGD+        +K+    + +    Y L   I TY K  V    GITMGG   L +   F + TE T ++ PE  IGF  D G +F   R+         +  +L L    + G +    GL +H+V SE L  L+KRL
Sbjct:   48 RVITLNRPKKLNALNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCAGGDVATVAIFNFNKEFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTPFRIATENTKWAMPEMDIGFFPDVGSTFALPRIVTLANSNSQMALYLCLTGEVVTGADAYMLGLASHYVSSENLDALQKRL 238          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: ECHM_MOUSE (Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12
Identity = 56/191 (29.32%), Postives = 90/191 (47.12%), Query Frame = 2
Query:  149 QVVLGEEIG---NVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVGRAFSAGGDLKMFYDGRNSKDSCLEVVYRMYWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPG-HLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPE 709
            Q ++ E+ G   +V L+ LNRP+ LN + + ++  L + LE +E+D     +++ G  +AF+AG D+K     R  +D C    +  +W   HI   KK  +A  +G  +GG   L +        EK  F  PE  +G     G +   +R  G  L   + L    ++ Q+   AGL +   P EKL E
Sbjct:   34 QYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEQDPAVGAIVLTGGDKAFAAGADIKEM-QNRTFQD-CYSSKFLSHW--DHITRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVEKLVE 220          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: ECHM_DICDI (Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 55/183 (30.05%), Postives = 83/183 (45.36%), Query Frame = 2
Query:  164 EEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVGRAFSAGGDLKMFYDGRNSKDSCLEVVYRMYWLC--HHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEF-LALNWAXLNGQELVAAGLPTHFVPSEKL 703
            E+ G V LVTLNRP+ LN +S  ++S +   ++ +++D     +I+ G  +AF+AG D+K        +   L   Y    L   H +   +K  +A  +G  +GG   L +     +  EK VF  PE  +G    CG +    R  G      L L    L   E   AGL +  VP E+L
Sbjct:   29 EKKGRVGLVTLNRPKSLNALSDGLISEINSAVKLFQEDKDVGSIIITGSEKAFAAGADIK------EMEKVTLPDAYNNDLLAQWHDLTKIRKPIIAAVNGYALGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNLTAVEAEKAGLVSKVVPVEEL 205          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: ECHM_RAT (Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11
Identity = 55/191 (28.80%), Postives = 89/191 (46.60%), Query Frame = 2
Query:  149 QVVLGEEIG---NVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVGRAFSAGGDLKMFYDGRNSKDSCLEVVYRMYWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPG-HLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPE 709
            Q ++ E+ G   +V L+ LNRP+ LN + + ++  L + LE +E+D     +++ G  +AF+AG D+K     R  +D C    +  +W   HI   KK  +A  +G  +GG   L +        EK  F  PE  +G     G +   +R  G  L   + L    ++ Q+   AGL +   P E L E
Sbjct:   34 QYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEM-QNRTFQD-CYSGKFLSHW--DHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVE 220          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: FADB_BACSU (Probable enoyl-CoA hydratase OS=Bacillus subtilis GN=fadB PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 59/208 (28.37%), Postives = 96/208 (46.15%), Query Frame = 2
Query:  179 VRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVGRAFSAGGDLKMFYDGRNSKDSCLEVVYRMYWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAV----KSGIEKFSEMS 790
            V ++T++ P   N +SS+++  L+  L++ E D   + +I+ G GR FSAG D+K F   + ++DS L +  R   L   I ++ K  +A  HG  +GG   L +     +  E      PE ++G     GF+    RLP ++    AL        EL+ +G      P      L+  L+ +   DE  V    K+   KF+E S
Sbjct:   12 VAVLTIHNP-PANALSSRILEELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTSLKGNEDSSL-LAERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIP--GFAGT-QRLPRYVGTAKAL--------ELIGSG-----EPISGKEALDLGLVSIGAKDEAEVIEKAKALAAKFAEKS 201          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: ECHM_HUMAN (Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11
Identity = 52/191 (27.23%), Postives = 86/191 (45.03%), Query Frame = 2
Query:  149 QVVLGEEIGN---VRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVGRAFSAGGDLKMFYDGRNSKDSCLEVVYRMYWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPG-HLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPE 709
            + ++ E+ G    V L+ LNRP+ LN +   ++  L + L+ +E+D     +++ G  +AF+AG D+K   +   S   C    +  +W   H+   KK  +A  +G   GG   L +        EK  F+ PE  IG     G +   +R  G  L   + L    ++ Q+   AGL +   P E L E
Sbjct:   34 EYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQN--LSFQDCYSSKFLKHW--DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVE 220          
The following BLAST results are available for this feature:
BLAST of EY659632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
HIBCH_YEAST1.474e-1932.983-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
ECHM_MOUSE1.746e-1229.32Enoyl-CoA hydratase, mitochondrial OS=Mus musculus... [more]
ECHM_DICDI3.889e-1230.05Probable enoyl-CoA hydratase, mitochondrial OS=Dic... [more]
ECHM_RAT1.478e-1128.80Enoyl-CoA hydratase, mitochondrial OS=Rattus norve... [more]
FADB_BACSU7.334e-1128.37Probable enoyl-CoA hydratase OS=Bacillus subtilis ... [more]
ECHM_HUMAN9.579e-1127.23Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659632 ID=EY659632; Name=EY659632; organism=Citrus sinensis; type=EST; length=890bp
AGTTGACTTTATCTTGTCTCTCTCTTCATTGGACACAGTGTTGTTTAACA
AAACCTACAAGTTTCTCTCTGTTCTTTTTCTTAGCTTTGAATCAGCTAAC
CTACTAATTGACTAAATGGCGCAAGGTGTTGTTAAGAACCCAGATGAGCA
GGTTGTGCTTGGAGAAGAAATAGGCAATGTGAGACTGGTCACCTTAAACC
GGCCTCGCCAATTGAATGTCATCTCATCTAAAGTGGTGTCTCTATTGGCA
GAATACTTGGAAAAATGGGAAAAAGATGACCAAGCTAAGCTTGTAATAGT
CAAGGGAGTTGGCCGAGCTTTTTCTGCTGGTGGGGATTTGAAAATGTTTT
ATGATGGGAGGAACTCAAAGGATTCCTGCCTCGAAGTGGTCTATAGAATG
TATTGGCTTTGCCATCACATTCATACCTATAAGAAAACCCAGGTAGCTCT
TGCTCATGGAATTACAATGGGAGGATGCGCGTCTTTGATGGTTCCTCTGA
AATTCTCAGTTGTCACGGAAAAAACTGTTTTTTCCACTCCAGAAGCAAGT
ATTGGATTTCATACTGATTGCGGGTTCTCATTCATCCATTCTCGTCTCCC
TGGACATTTANGGGAATTCCTGGCCTTAAACTGGGCANGGCTAAATGGGC
AGGAACTGGTTGCAGCTGGGCTACCTACCCATTTTGTCCCTTCTGAGAAA
TTGCCCGAGCTAGAAAAGCGTCTGATAGGCTTAAACACTGGTGATGAAAT
TGCAGTCAAATCTGGCATTGAGAAGTTCTCTGAGATGTCCAGCTTGATGG
ACAAATGTNCTAAATAAGCAGTCTATATGGATGAGTGGTTCTCCAAGGAA
AACTGAACCCAGATTTTAAATTCTTTGAATCCAAAGCCGG
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