EY659604

Overview
NameEY659604
Unique NameEY659604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT5C_ANOGA (Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 1 
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+V+DNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT4_DROME (Actin, larval muscle OS=Drosophila melanogaster GN=Act79B PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 1 
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+V+DNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K       +L YPI HG + NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDCYVGDEAQSKR---GILSLKYPIEHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT4_CAEEL (Actin-4 OS=Caenorhabditis elegans GN=act-4 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 1 
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+V+DNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT4_BOMMO (Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 1 
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+V+DNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT4_ARTSX (Actin, clone 403 OS=Artemia sp. PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 1 
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+V+DNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT4_ARATH (Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 56/141 (39.72%), Postives = 73/141 (51.77%), Query Frame = 1 
Query:  310 VVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            +V DNGTG  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V+NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:   10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT3_PODCA (Actin-3 OS=Podocoryne carnea GN=ACT3 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 1 
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+V+DNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT3_LIMPO (Actin-3 OS=Limulus polyphemus PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 1 
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+V+DNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT3_BOMMO (Actin, cytoplasmic A3 OS=Bombyx mori PE=3 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 1 
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+V+DNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
[Close]
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT3B_HELAM (Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=actA3b PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 1 
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+V+DNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
The following BLAST results are available for this feature:
BLAST of EY659604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
ACT5C_ANOGA1.582e-1939.44Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1[more]
ACT4_DROME1.582e-1938.73Actin, larval muscle OS=Drosophila melanogaster GN... [more]
ACT4_CAEEL1.582e-1939.44Actin-4 OS=Caenorhabditis elegans GN=act-4 PE=2 SV... [more]
ACT4_BOMMO1.582e-1939.44Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV... [more]
ACT4_ARTSX1.582e-1939.44Actin, clone 403 OS=Artemia sp. PE=2 SV=1[more]
ACT4_ARATH1.582e-1939.72Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=1 SV=1[more]
ACT3_PODCA1.582e-1939.44Actin-3 OS=Podocoryne carnea GN=ACT3 PE=3 SV=1[more]
ACT3_LIMPO1.582e-1939.44Actin-3 OS=Limulus polyphemus PE=1 SV=1[more]
ACT3_BOMMO1.582e-1939.44Actin, cytoplasmic A3 OS=Bombyx mori PE=3 SV=3[more]
ACT3B_HELAM1.582e-1939.44Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-A07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659604 ID=EY659604; Name=EY659604; organism=Citrus sinensis; type=EST; length=935bp
CCACGCGTCCGGACAGTGATAGCAATGATGAAGAAGTTGATGAGCGAGGC
TTATCATTTCCATTATCGATGTTGTTGTTGAAATGGGTGTTGGATTTTGT
ACCAACTTACAAAGCTGCCGTGCGTTGAGTCGCTCCTTTCACTTGCGATT
CAAGTCTTTCGTATATCACCATCACCAACACTTTCTTCACGATCATGTTC
CATTGCCTTAACCCTTCTCTCGGATCTCAGTTGCGGATCCCTCGTTACCA
CCACCACCACGATTCTCACCTCCTTTCTCTTTACAATGGACCCCACTTCT
CGTCCTGCCGTCGTCATCGACAACGGCACCGGGTATACTAAGATGGGTTT
TGCGGGTAATGTAGAGCCGTGTTTTATTCTTCCGACTGTAGTAGCTGTAA
ACGAGTCGTTTTTAAATCAATCAAGATCTTCGTCAAAGGCCAATTGGCTT
GCACAGTACAACGCAGGCGTAATGGCCGACCTTGACTTCTTTATTGGAGA
TGAAGCAGTCACAAAATCGCGATCTAGTAGTACCTATAACCTTAGTTATC
CTATTAGGCATGGTCAGGTTGATAATTGGGATGCTATGGAGAGGTATTGG
CAGCAGTGTATATTTAATTACTTGCGTTGTGATCCAGAGGATCACTACTT
TCTGTTGACCGAGAGCCCGCTCACTGCTCCTGAGAGTAGAGAGTATACTG
GTGAGATCATGTTTGAGACTTTTATGTTCCTGGNNCTTATATTGCTGTGA
ATTCNGTGCTTGCACTGCAGCTGGGTACACACATCTAAATGTGAGAGACA
NGAGTTGTGTGGATGTTNGAATGGGGCTACTATGTAGTACAGTCCCAGAG
GGCTTGTCATGGGAGCACATTAGTCGATTCTATTGCTGAAAGATGCACTT
TTTCATCCCAGCTCTGCGGGAAAAGGGAAATATTC
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