EY659601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_STAAR (30S ribosomal protein S1 OS=Staphylococcus aureus (strain MRSA252) GN=rpsA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 K E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR+ R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_STAAN (30S ribosomal protein S1 OS=Staphylococcus aureus (strain N315) GN=rpsA PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 K E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR+ R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIHGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_STAAM (30S ribosomal protein S1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpsA PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 K E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR+ R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIHGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_STAAC (30S ribosomal protein S1 OS=Staphylococcus aureus (strain COL) GN=rpsA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 K E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR+ R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RR1_PORPU (30S ribosomal protein S1, chloroplastic OS=Porphyra purpurea GN=rps1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15 Identity = 38/102 (37.25%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAM-ADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 342 K + V+E+ + L+LS+R+A+ A + + L +G+++ G + + PYG FI G + GL+H+S+I+ +V I + + GDT+K +I+ D+++GR+SLS K L+ Sbjct: 162 KLLNVEEKSNNLILSHRRALIAQASSNLIVGNIIEGVINQITPYGLFIKAGNLKGLVHISEINVKQVERIPSQFKIGDTIKAVIIHVDKKQGRLSLSMKHLK 263
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RR1_PORYE (30S ribosomal protein S1, chloroplastic OS=Porphyra yezoensis GN=rps1 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.379e-15 Identity = 36/101 (35.64%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAM-ADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKL 339 K + V+E+ + L+LS+R+A+ + + + L +G+++ G + + PYG FI +G + GL+H+S+I+ + I++ + GDT+K +I+ D+++GR+SLS K L Sbjct: 162 KLLNVEEKSNNLILSHRRALISQASSNLIVGNIIEGIINQITPYGLFIKVGNLKGLVHISEINIKNLEQISSQFKIGDTIKAVIIHVDKKQGRLSLSMKHL 262
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_STAS1 (30S ribosomal protein S1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rpsA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.166e-14 Identity = 44/117 (37.61%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 K E+D +R++LS + A A+ L G V+ G V L +GAF+DIGG++GL+HVS++SH+ V V+ G+T+ V I S D++ R+SLS K P+P + I+ Sbjct: 157 KVEELDPANNRVILSRKAVEALENAEKKDELLESLNEGDVIEGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVKSPEDVVSIGETVNVKIKSVDKDSERISLSIKDTLPSPFESIK 273
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_STAEQ (30S ribosomal protein S1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpsA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.166e-14 Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAM---------ADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 K E+D E +R++LS RKA+ A L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G+ +KV + S +++ R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQLENDAKKASILDSLNEGDVIDGKVARLTNFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSVGEAVKVKVKSVEKDSERISLSIKDTLPTPFENIK 273
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_STAHJ (30S ribosomal protein S1 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14 Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 K E+D E +R++LS RKA+ ++ L G V+ G V L +GAF+DIGG++GL+HVS++SH+ V V+ G + V + S +++ R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQAENDVKKASLLESLNAGDVIKGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVDSPEDVVSVGQEVDVKVKSVEKDAERISLSIKDTLPTPFESIK 273
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_RHIME (30S ribosomal protein S1 OS=Rhizobium meliloti GN=rpsA PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 42/116 (36.21%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 363 + +++D+ + +V+S R + +S+A+ L G VV G V+++ YGAF+D+GGI+GLLHV+ ++ RV + +L G +KV I+ ++E R+SL K+LE P D I Sbjct: 161 EILKMDKRRGNIVVSRRTVLEESRAEQRSEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEILNIGQQVKVQIIRINQETHRISLGMKQLESDPWDGI 276 The following BLAST results are available for this feature:
BLAST of EY659601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659601 ID=EY659601; Name=EY659601; organism=Citrus sinensis; type=EST; length=752bpback to top |