EY659601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_PSEAE (30S ribosomal protein S1 OS=Pseudomonas aeruginosa GN=rpsA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 40/112 (35.71%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAM-ADSQAQ-------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 K +++D++++ +V+S R + A++ A+ L G V G V++L YGAF+D+GG++GLLH++ ++ R+ + ++ GD + V +L DRER RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRSVLEAENSAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVGDEIDVKVLKFDRERNRVSLGLKQLGEDP 266 HSP 2 Score: 69.3218 bits (168), Expect = 2.509e-11 Identity = 47/143 (32.87%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 46 VEVDEEQSRLVLSNRKAMA----DSQAQLGIGSVVIGTVQSLKPYGAFIDI-GGINGLLHVSQISHDRVADIATV-LQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARAD 456 +++DEE+ R+ L ++ + D +Q G + GT++S+ +G FI + GGI+GL+H+S IS + V + A + GD L+ +ILS D ER R+SL K+LE P N + EK + T ++ A+ ++ D Sbjct: 333 LDIDEERRRISLGIKQCKSNPWEDFSSQFNKGDRISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELETVILSVDPERERISLGIKQLEDDP---FSNYASLHEKGSIVRGTVKEVDAKGAVISLGD 472
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_BUCBP (30S ribosomal protein S1 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpsA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13 Identity = 41/113 (36.28%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQAQ---------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 K +++D++++ +V+S R+A+ +S+ L G +V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD +K+ IL DRE+ RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVS-RRAVIESEYNAERNLLLETLQEGLIVSGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNIGDEVKIKILKFDREKIRVSLGLKQLSDDP 266
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: ISPH_CLOAB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium acetobutylicum GN=ispH PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13 Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 70 RLVLSNRKAMADSQA--QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 R +LS K + +L G VV G V+ L +GAF++I G++GLLHVS+IS RV A VL+ GD +KV +LS D+E ++SLS KKL P Sbjct: 463 RALLSKEKEKVEETVWNKLEEGQVVEGEVKRLTDFGAFVEIEGVDGLLHVSEISWGRVEKPADVLKIGDKIKVYVLSVDKENKKLSLSVKKLTENP 558
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_HAEIN (30S ribosomal protein S1 OS=Haemophilus influenzae GN=rpsA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13 Identity = 39/112 (34.82%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 K +++D++++ +V+S R + +Q L GS V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L D++R RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRAVIESENSQEREQVLENLVEGSEVKGVVKNLTEYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEVTVKVLKFDKDRTRVSLGLKQLGQDP 266
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_PROSP (30S ribosomal protein S1 (Fragment) OS=Providencia sp. GN=rpsA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 41/112 (36.61%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAM-ADSQAQ-------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 K +++D++++ +V+S R + ++S A+ L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DRER RVSL K+L P Sbjct: 50 KVIKLDQKRNNVVVSRRAVIESESSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 161
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_COXBU (30S ribosomal protein S1 OS=Coxiella burnetii GN=rpsA PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 39/112 (34.82%), Postives = 69/112 (61.61%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAM-----ADSQA---QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 K +++D+ ++ +V+S R M A+ QA +L G + G ++++ YGAF+D+GG++GLLH++ ++ RV + +L GD + V +L DR++ RVSL K+L P Sbjct: 151 KIIKMDQRRNNVVVSRRAVMEAETSAERQARLEELQEGQEIKGVIKNITDYGAFVDLGGVDGLLHITDMAWGRVKHPSDLLNVGDEVHVKVLKFDRDKKRVSLGMKQLADDP 262
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_RICFE (30S ribosomal protein S1 OS=Rickettsia felis GN=rpsA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 39/117 (33.33%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 K + +D++ +V+S R + +S+++ + G V+ GTV+++ YGAFID+G ++GLLH++ IS RV + VL+ +KVM++ D + R+SL K+L+ P + I+ Sbjct: 168 KILSMDKKLDNIVVSRRAILEESRSEARDEMLSKIKEGMVLEGTVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLEFNQKVKVMVIKFDEKTKRISLGIKQLDSNPWEAIK 284
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_MYCTU (30S ribosomal protein S1 OS=Mycobacterium tuberculosis GN=rpsA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 40/112 (35.71%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 K +E+D+ ++ +VLS R + +Q++ L G++ G V S+ +GAF+D+GG++GL+HVS++S + + V+Q GD + V +L D +R RVSLS K + P Sbjct: 172 KIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDP 283
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_SHIFL (30S ribosomal protein S1 OS=Shigella flexneri GN=rpsA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 39/112 (34.82%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 351 K +++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DRER RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659601 vs. ExPASy Swiss-Prot
Match: RS1_RICCN (30S ribosomal protein S1 OS=Rickettsia conorii GN=rpsA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 39/117 (33.33%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 40 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIR 366 K + +D++ +V+S R + +S+++ + G V+ GTV+++ YGAFID+G ++GLLH++ IS RV + VL +KVM++ D + R+SL K+L+ P + I+ Sbjct: 168 KILSMDKKLGNIVVSRRAILEESRSEARDEMLSKIKEGMVLEGTVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLDFNQKVKVMVIKFDEKNKRISLGIKQLDSNPWEAIK 284 The following BLAST results are available for this feature:
BLAST of EY659601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659601 ID=EY659601; Name=EY659601; organism=Citrus sinensis; type=EST; length=752bpback to top |