EY659599

Overview
NameEY659599
Unique NameEY659599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDA9_ARATH (Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.060e-71
Identity = 132/245 (53.88%), Postives = 167/245 (68.16%), Query Frame = 3
Query:  153 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKF-EIIFLVQGIYVILXIRKESLLP-XCPLDDGIDDESYHYFVKPDIXKMMEV 881
            K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  YGL   M+V +P  A   ++ +FH+ DYV FL  I PE       ++ R+N+GEDCPVF+ LF FCQ YAGG++  A +LN+ LCDIAINWA GLHHAKKC+ASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGV EAFY TDRV   S HKF +  F   G    +  R+        PL DGIDD S++   +  I K++E+
Sbjct:    4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEI 248          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDA2_CAEEL (Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.203e-61
Identity = 113/204 (55.39%), Postives = 145/204 (71.08%), Query Frame = 3
Query:  132 PSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPE---THQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKF 734
            P G D  KR V Y+Y  +VG+++YGQ HPMKP R+ + + L+  Y + + M V++       D+  FH +DYV+FL ++TP+   T  D +  L++FN+GEDCP+F GL+ +C  YAGGSV GA +LNH + DI INW  GLHHAKK EASGFCYVNDIVL ILELLK H+RVLY+DIDIHHGDGV EAF  +DRV   S H+F
Sbjct:   21 PDGADVKKRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADISVFHTEDYVNFLQTVTPKLGLTMPDDV--LRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRF 222          

HSP 2 Score: 25.409 bits (54), Expect = 2.203e-61
Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = 2
Query:  740 YFPGTGDIRDIGYSKGK 790
            YFPG+G I D G   GK
Sbjct:  225 YFPGSGSIMDKGVGPGK 241          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: PHD1_SCHPO (Histone deacetylase phd1 OS=Schizosaccharomyces pombe GN=phd1 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.621e-59
Identity = 115/231 (49.78%), Postives = 149/231 (64.50%), Query Frame = 3
Query:  153 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFE-IIFLVQGIYVILXIRKESLLP-XCPLDDGIDDESY 839
            K++V Y  D +VGNY+YG  HPMKPHRI +T+ L+  YGL   M V  P  A   ++  FH +DY+ FL  +TP+  +    + ++FN+G+DCPVFDG + F Q  AG S+  + KL  G  DIAINW+ GLHHAK+ EASGFCYVNDIVLAIL +L+   RVLY+DIDIHHGDGV +AFY +DRV   S HK+    F   G +    ++         PL+DGI DE Y
Sbjct:   25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEFHREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQY 255          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDA7_ARATH (Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.644e-56
Identity = 124/261 (47.51%), Postives = 157/261 (60.15%), Query Frame = 3
Query:  129 LPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPET----HQDQLMQLKRFNVGEDC--PVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKF----EIIFLVQGIYVILXIRKESLLPXCPLDDGIDDESYHYFVKPDIXKMMEV 881
            + S  DG KR+V YFY+P +G+YYYG   P KP RIR+TH L+  Y L ++M++  P  A   D  +FH+ +Y++FL S+TPET    H      LKRFNV  D   PVF  LF +C+ YAGGS+  A KLN    DIAINWA G+HH KK +ASGF YVND+VLAILELLK  +RVLY++I   HGD V EAF  TDRV   S HK     +I    +G       + +      PL DG+DD S      P I + ME+
Sbjct:    1 MASLADGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGDTGDISDYGEG-------KGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEI 254          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HOS2_YEAST (Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae GN=HOS2 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.905e-55
Identity = 108/231 (46.75%), Postives = 152/231 (65.80%), Query Frame = 3
Query:  159 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQ--LKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFEIIFL--VQGIYVILXIRKESLLPXCPLDDGIDDESY 839
            +V Y ++ +V +Y+YG  HPMKP R+ +T  L++ YGL + M + +   A   +L +FH++DYV+FL  ++PE + ++L +  L+ FN+G+DCP+F  L+ +   Y G S+    KL +   DIAINW+ GLHHAKK   SGFCYVNDIVL+IL LL+ H R+LY+DID+HHGDGV EAFYTTDRV   S HK+   F      +  I   + +      PL+DGIDD+SY
Sbjct:   27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPE-NANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSY 256          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDAC8_DANRE (Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.548e-41
Identity = 98/231 (42.42%), Postives = 129/231 (55.84%), Query Frame = 3
Query:  156 RKVCYFYDPEVGNYYYGQGHPMK-PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFEI-IFLVQGIYVILXIRK-ESLLPXCPLDDGIDDESY 839
            R V Y Y PE   Y        K P+R  M H+L+  YGLL+ M+V+KP  A   ++  FH D Y+  L  I+ +   D   Q   F +G DCPV +G+F +     G ++  A  L  G CD+AINWA G HHAKK EASG CYVND VL IL+L ++++RVLYVD+D+HHGDGV +AF  T +V   S HKF    F   G      + K        P +DG+ D+ Y
Sbjct:   15 RSVVYVYSPE---YIQTCDSLSKVPNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDD-PQSADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSCYVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDGVRDDRY 241          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDAC8_RAT (Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.157e-40
Identity = 86/232 (37.07%), Postives = 129/232 (55.60%), Query Frame = 3
Query:  225 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFEIIF-----------LVQGIYVILXIRKESLLPXCPLDDGIDDESYHYFVKPDIXKMMEVLN 887
            P R  M H+L+  Y L + M+++KP  A   ++  FH D Y+  L  ++ E  +D    ++ + +G DCP  +G+F +     GG++  A  L  G C +AINW+ G HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGV +AF  T +V   S HKF   F           L +G Y  + +         P+ DGI DE Y++  +  + ++ +  N
Sbjct:   35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIE-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNV---------PIQDGIQDEKYYHICESVLKEVYQAFN 256          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDAC8_MOUSE (Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 2.157e-40
Identity = 86/232 (37.07%), Postives = 129/232 (55.60%), Query Frame = 3
Query:  225 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFEIIF-----------LVQGIYVILXIRKESLLPXCPLDDGIDDESYHYFVKPDIXKMMEVLN 887
            P R  M H+L+  Y L + M+++KP  A   ++  FH D Y+  L  ++ E  +D    ++ + +G DCP  +G+F +     GG++  A  L  G C +AINW+ G HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGV +AF  T +V   S HKF   F           L +G Y  + +         P+ DGI DE Y++  +  + ++ +  N
Sbjct:   35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIE-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNV---------PIQDGIQDEKYYHICESVLKEVYQAFN 256          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDAC8_HUMAN (Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 6.275e-40
Identity = 86/232 (37.07%), Postives = 127/232 (54.74%), Query Frame = 3
Query:  225 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFEIIF-----------LVQGIYVILXIRKESLLPXCPLDDGIDDESYHYFVKPDIXKMMEVLN 887
            P R  M H+L+  Y L + M+++KP  A   ++  FH D Y+  L  ++ E   D    ++ + +G DCP  +G+F +     G ++  A  L  G+C +AINW+ G HHAKK EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGDGV +AF  T +V   S HKF   F           L +G Y  + +         P+ DGI DE Y+   +  + ++ +  N
Sbjct:   35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNV---------PIQDGIQDEKYYQICESVLKEVYQAFN 256          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDAC8_XENTR (Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.195e-40
Identity = 90/232 (38.79%), Postives = 128/232 (55.17%), Query Frame = 3
Query:  225 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFEIIF-----------LVQGIYVILXIRKESLLPXCPLDDGIDDESYHYFVKPDIXKMMEVLN 887
            P R  M H+L+  YGLL+ M+V+KP  A   ++  FH D Y+  L  ++ E   D    L+ + +G DCP+ +G++ +     G ++  A +L  G   IAINW  G HHAKK EASGFCY+ND VL IL+L ++ +RVLYVD+D+HHGDGV +AF  T +V   S HKF   F           L +G Y  + +         PL DGI DE Y+   +  + ++    N
Sbjct:   27 PRRASMVHSLIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDNDDPETLE-YGLGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFCYLNDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSVNV---------PLQDGIQDEKYYQICEGVLKEVFTTFN 248          
The following BLAST results are available for this feature:
BLAST of EY659599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HDA9_ARATH1.060e-7153.88Histone deacetylase 9 OS=Arabidopsis thaliana GN=H... [more]
HDA2_CAEEL2.203e-6155.39Putative histone deacetylase 2 OS=Caenorhabditis e... [more]
PHD1_SCHPO4.621e-5949.78Histone deacetylase phd1 OS=Schizosaccharomyces po... [more]
HDA7_ARATH1.644e-5647.51Histone deacetylase 7 OS=Arabidopsis thaliana GN=H... [more]
HOS2_YEAST6.905e-5546.75Probable histone deacetylase HOS2 OS=Saccharomyces... [more]
HDAC8_DANRE2.548e-4142.42Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2... [more]
HDAC8_RAT2.157e-4037.07Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac... [more]
HDAC8_MOUSE2.157e-4037.07Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=... [more]
HDAC8_HUMAN6.275e-4037.07Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=... [more]
HDAC8_XENTR8.195e-4038.79Histone deacetylase 8 OS=Xenopus tropicalis GN=hda... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659599 ID=EY659599; Name=EY659599; organism=Citrus sinensis; type=EST; length=944bp
CGCAAGTTAAGCCCCATCTGTTTTATTCTCTTGAGGTCTCGTCCCGTTGC
ATTCTTAGTTAGTGTTGGCTCTCCCAGTAAGTGCAGGCCCCAAGAAATAT
TATTCATATGGACACTGGAGGCAATTCTTTACCATCTGGTACTGATGGCG
TTAAGAGAAAGGTGTGTTATTTCTACGACCCAGAGGTGGGCAATTACTAC
TATGGACAGGGTCACCCGATGAAACCCCATCGCATTCGTATGACCCATGC
CCTTCTCGCCCACTACGGCTTGCTTCAGAACATGCAGGTCCTCAAACCTT
TTCCTGCTAGGGAAAGGGATCTTTGCCGCTTCCATGCCGATGATTATGTC
TCCTTCCTCATGAGTATCACCCCTGAGACTCATCAGGATCAGCTTATGCA
GCTCAAGCGCTTTAATGTTGGTGAAGATTGCCCTGTCTTTGACGGTCTTT
TCTCCTTCTGTCAAACTTATGCTGGGGGCTCTGTTGGTGGTGCTGTCAAG
TTGAATCACGGCCTCTGTGATATTGCTATCAATTGGGCCCGTGGCCTTCA
TCATGCTAAGAAATGTGAAGCTTCCGGATTCTGTTATGTCAATGACATTG
TCTTGGCCATTTTGGAGCTACTTAAGCAGCATGAGCGTGTATTATATGTA
GATATTGATATCCATCATGGAGATGGCGTTGGAGAAGCATTTTATACAAC
TGATAGGGTAAATGACTGTTCATTNCATAAGTTCGAGATTATTTTCCTGG
TACAGGGGATATACGTGATATTGGNTATTCGAAAGGAAAGTCTACTNCCT
NAATGTCCTCTTGATGATGGNATCGATGATGAAAGCTACCATTACTTTGT
CAAACCCGATATCNGAAAAATGATGGAGGTTTTAAACCTGGTGCTGTGGT
CCTNCATGGGGGGCTGACTCATGTCTGGGGAAAGTTTAGATGCT
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