EY659595

Overview
NameEY659595
Unique NameEY659595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7213 contig Csv1_Contig7213:555..1160. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_XANP2 (Protein apaG OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=apaG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 52/118 (44.07%), Postives = 74/118 (62.71%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSL 359
            T  I+V     Y+ +RS+P +G++F+AY V + N  +  VQL  RHW+ITDANG TE + G GV+GE+P + P   FEY+S  PL+T +G M G +EM        +TF++ I  FSL
Sbjct:    6 TRNIQVTATPRYVAERSEPDQGRHFWAYTVEVANLGQETVQLKGRHWVITDANGHTEEVHGAGVVGEEPTLPPGGRFEYTSGVPLNTSTGIMSGHYEML---ADNGETFSIEIPAFSL 120          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SHEB9 (Protein apaG OS=Shewanella baltica (strain OS195) GN=apaG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            IRV+V+  YIE +S P   +Y F+Y + I N  E+  +L  RHWIITDANG T  + G GV+GE P I PNT+++Y+S   L TP G M G + M  V   G + F   I PF L+T G
Sbjct:    8 IRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNTSEVQGAGVVGETPTIAPNTAYQYTSGTVLDTPLGIMHGTYGM--VSESG-EHFQATIRPFRLTTPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SHEB8 (Protein apaG OS=Shewanella baltica (strain OS185) GN=apaG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            IRV+V+  YIE +S P   +Y F+Y + I N  E+  +L  RHWIITDANG T  + G GV+GE P I PNT+++Y+S   L TP G M G + M  V   G + F   I PF L+T G
Sbjct:    8 IRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNTSEVQGAGVVGETPTIAPNTAYQYTSGTVLDTPLGIMHGTYGM--VSESG-EHFQATIRPFRLATPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SHEB5 (Protein apaG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=apaG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            IRV+V+  YIE +S P   +Y F+Y + I N  E+  +L  RHWIITDANG T  + G GV+GE P I PNT+++Y+S   L TP G M G + M  V   G + F   I PF L+T G
Sbjct:    8 IRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNTSEVQGAGVVGETPTIAPNTAYQYTSGTVLDTPLGIMHGTYGM--VSESG-EHFQATIRPFRLATPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SHEB2 (Protein apaG OS=Shewanella baltica (strain OS223) GN=apaG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            IRV+V+  YIE +S P   +Y F+Y + I N  E+  +L  RHWIITDANG T  + G GV+GE P I PNT+++Y+S   L TP G M G + M  V   G + F   I PF L+T G
Sbjct:    8 IRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNTSEVQGAGVVGETPTIAPNTAYQYTSGTVLDTPLGIMHGTYGM--VSESG-EHFQATIRPFRLATPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_RHILW (Protein apaG OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=apaG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            T  I V V   Y+E++S P   +Y + YR+ I+NNS   V+L+ R+W ITD NG+ + + G GV+GEQP + P  ++EYSS CPL TPSG M G ++M+  +    + F+V I  FSL + G
Sbjct:    6 TKDIEVVVEPFYLEEQSDPEDDRYVWGYRIVISNNSAIAVRLVNRYWNITDQNGQVDEVTGPGVVGEQPRLSPGDTYEYSSGCPLDTPSGLMFGHYQMETDE---GEMFDVDIPAFSLDSPG 124          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_BEII9 (Protein apaG OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=apaG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T  I++ V   ++ +RS   +  +F+AY V I N S+  VQL  RHW ITDANGK E + G G++GEQPV+ P  +F Y+S CPL+TPSG M G + M  V   G   F  AI  FSL +
Sbjct:    6 TRDIQITVLTEFVPERSDADESSFFWAYTVEIANQSDLTVQLTGRHWKITDANGKLEEVQGPGIVGEQPVLKPGETFRYTSGCPLTTPSGIMTGSYRM--VTEKG-DVFEAAIPVFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_RHIEC (Protein apaG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=apaG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.117e-22
Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            T  I V V   Y+E++S P   +Y + YR+ I+NNS   V+L+ R+W ITD NG+ + + G GV+GEQP + P  ++EYSS CPL TPSG M G ++M+  +    + F+V I  FSL + G
Sbjct:    6 TRDIEVVVEPFYLEEQSDPEDDRYVWGYRIVISNNSGVAVRLVNRYWNITDQNGQVDEVTGPGVVGEQPRLSPGDTYEYSSGCPLDTPSGLMFGHYQMETDE---GELFDVDIPAFSLDSPG 124          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SHESW (Protein apaG OS=Shewanella sp. (strain W3-18-1) GN=apaG PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.610e-22
Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            IRV+V+  YIE +S P   +Y F+Y + I N  E+  +L  RHWIITDANG T  + G GV+GE P I PNT+++Y+S   L TP G M G + M  V   G + F   I PF L+T G
Sbjct:    8 IRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNTSEVQGAGVVGETPTIPPNTAYQYTSGTLLDTPLGIMHGTYGM--VSESG-ERFEAIIKPFRLATPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SHEPC (Protein apaG OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=apaG PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.610e-22
Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            IRV+V+  YIE +S P   +Y F+Y + I N  E+  +L  RHWIITDANG T  + G GV+GE P I PNT+++Y+S   L TP G M G + M  V   G + F   I PF L+T G
Sbjct:    8 IRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNTSEVQGAGVVGETPTIPPNTAYQYTSGTLLDTPLGIMHGTYGM--VSESG-ERFEAIIKPFRLATPG 123          
The following BLAST results are available for this feature:
BLAST of EY659595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
APAG_XANP21.621e-2244.07Protein apaG OS=Xanthobacter autotrophicus (strain... [more]
APAG_SHEB91.621e-2246.22Protein apaG OS=Shewanella baltica (strain OS195) ... [more]
APAG_SHEB81.621e-2246.22Protein apaG OS=Shewanella baltica (strain OS185) ... [more]
APAG_SHEB51.621e-2246.22Protein apaG OS=Shewanella baltica (strain OS155 /... [more]
APAG_SHEB21.621e-2246.22Protein apaG OS=Shewanella baltica (strain OS223) ... [more]
APAG_RHILW1.621e-2243.44Protein apaG OS=Rhizobium leguminosarum bv. trifol... [more]
APAG_BEII91.621e-2245.83Protein apaG OS=Beijerinckia indica subsp. indica ... [more]
APAG_RHIEC2.117e-2243.44Protein apaG OS=Rhizobium etli (strain CFN 42 / AT... [more]
APAG_SHESW3.610e-2246.22Protein apaG OS=Shewanella sp. (strain W3-18-1) GN... [more]
APAG_SHEPC3.610e-2246.22Protein apaG OS=Shewanella putrefaciens (strain CN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659595 ID=EY659595; Name=EY659595; organism=Citrus sinensis; type=EST; length=606bp
CAACAACCTTGGGGATAAGGGTTCAAGTTAGACGTGTGTACATTGAGGAC
CGTAGTCAACCTTTGAAGGGGCAGTACTTTTTCGCATATAGGGTAAGAAT
TACCAATAACTCAGAACGTCCTGTTCAACTTCTCAGACGGCATTGGATTA
TCACAGATGCAAACGGAAAAACTGAAAACATCTTAGGAGTTGGAGTCATT
GGTGAACAGCCAGTTATACTTCCTAATACCAGTTTTGAATACTCTTCAGC
ATGCCCTTTAAGCACTCCGAGTGGCAGAATGGAAGGTGATTTTGAGATGA
AACATGTTGATAGAGTAGGTTCACAAACTTTCAATGTGGCGATTGCACCT
TTTTCTCTATCCACAATGGGTGATGACAGTGATTCTTTTTAGAACTGGTA
TTAGGCGTCTCTGTGGAGGGTTGAGGCGCCATATCCCTGTCATGGTTGAT
TATTTTCAGAATTATAAATCAATGCATTGCAATATGTAAGTGTAATTATT
GGTCTATAAGCTCTTCATTTGTTTCTCTGCAAGGATCATATGTAGCAAAC
TTTCAAAAGAAATCAATTAATAATAAGTGTATTATAGCTAAAAAAAAAAA
AAAAAA
back to top