EY659565

Overview
NameEY659565
Unique NameEY659565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.452e-20
Identity = 59/160 (36.88%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  268 NIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKHAMRLLVFEFMPNGNLRDCLDGVLVEG---------MNWDTRVAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKTL 720
            NI+G G    VYR     G  +AVK+ +T G       F  E+  L  L H ++    GY         M+L++ EF+PNG+L D L   +  G         +NW  R  IA+G A  L +LH    P ILH ++KS+NILLDE   AK++D G+ K L
Sbjct:  597 NIIGMGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEQEIGRLGGLQHPNLSSFQGYYFS----STMQLILSEFVPNGSLYDNLHLRIFPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFL 752          
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.104e-19
Identity = 64/177 (36.16%), Postives = 100/177 (56.50%), Query Frame = 1
Query:  220 FSYSALEHATDKF------SGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV---FLTEVDMLSRLHHCHVVPLVGYCSEFRGKHAMRLLVFEFMPNGNLRD---CLDGVLVEGMNWDTRVAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 714
            FS+  L+  T+ F      +G N +G+GG   VY+G   +  IVAVK+       + + +   F  E+ +++   H ++V L+G+ S+         LV+ +MPNG+L D   CLDG     ++W TR  +A G A G+ +LHE      +HRDIKS+NILLD++  AKI+D G+A+
Sbjct:  168 FSFHELKSITNNFDEQPASAGGNRMGEGGFGVVYKG-CVNNTIVAVKKLGAMVEISTEELKQQFDQEIKVMATCQHENLVELLGFSSDSDNL----CLVYAYMPNGSLLDRLSCLDGT--PPLSWHTRCKVAQGTANGIRFLHEN---HHIHRDIKSANILLDKDFTAKISDFGLAR 334          
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.442e-19
Identity = 69/185 (37.30%), Postives = 97/185 (52.43%), Query Frame = 1
Query:  217 RFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKHAMRLLVFEFMPNGNLRDCL--DGVLVEGM--NWDTRVAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKTLKADGLPSCSXSPA 759
            RF +  LE AT  F  +N++G+G    VY+  +   R +AVKR            F  E ++LSR+     V L+G+ ++        LLV EFM NG+L D +  D VL  G   +W  R+ IA+  A  +  LH    P I+HRDIKS+N+L+D+NLNAK+ D G+A     D     S  PA
Sbjct:   46 RFLHRDLESATGGFDINNLLGRGSHGSVYKAVI-GSRHIAVKR--PSKSREISREFHNEFEILSRIRSPRFVNLLGFSAD---NSKEPLLVVEFMGNGSLYDVIHSDTVLNSGAISSWSKRIKIALQIAKAVHLLHSQETP-IIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPA 223          
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.883e-19
Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1
Query:  220 FSYSALEHATDKFS------GSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSV---FLTEVDMLSRLHHCHVVPLVGYCSEFRGKHAMRLLVFEFMPNGNLRD---CLDGVLVEGMNWDTRVAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 714
            FS+  L++ T+ F       G N +G+GG   VY+G + +   VAVK+         + +   F  E+ ++++  H ++V L+G+ S+         LV+ +MPNG+L D   CLDG     ++W  R  IA GAA G+ +LHE      +HRDIKS+NILLDE   AKI+D G+A+
Sbjct:  168 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 334          
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.459e-19
Identity = 62/180 (34.44%), Postives = 95/180 (52.78%), Query Frame = 1
Query:  220 FSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADS---VFLTEVDMLSRLHHCHVVPLVGYCSEFRGKHAMRLLVFEFMPNGNLRD---CLDGVLVEGMNWDTRVAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKTLKADGLPS 741
            FS+S +E AT+ F  +  +G+GG   +Y G L   + VA+K       PN+      +  EVD+LS++ H +++ L+G C E         LV+E++P G+L D   C D      ++W  RV IA      L +LH   A  ++H D+K +NILLD NL +K++D G    L  +G  S
Sbjct:  469 FSFSEIEEATNHFDSTLKIGEGGYGSIYVGLLRHTQ-VAIKMLN----PNSSQGPVEYQQEVDVLSKMRHPNIITLIGACPEGWS------LVYEYLPGGSLEDRLTCKDNS--PPLSWQNRVRIATEICAALVFLHSNKAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKS 635          
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.212e-19
Identity = 62/187 (33.16%), Postives = 93/187 (49.73%), Query Frame = 1
Query:  193 WTIHGTIIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRF----------KTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKHAMRLLVFEFMPNGNLRDCL---DGVLVEGMNWDTRVAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 714
            WT   T  +     +EH        N++G+G S  VY+ ++ +  ++AVK+           KT+     DS F  EV  L  + H ++V  +G C         RLL++++M NG+L   L    GV    + W+ R  I +GAA GL YLH    P I+HRDIK++NIL+  +    I D G+AK
Sbjct:  764 WTWQFTPFQKLNFTVEHVLKCLVEGNVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDS-FSAEVKTLGSIRHKNIVRFLGCC----WNKNTRLLMYDYMSNGSLGSLLHERSGVC--SLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAK 943          
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.212e-19
Identity = 69/238 (28.99%), Postives = 110/238 (46.22%), Query Frame = 1
Query:   34 SSVISSDKESCNSATNLISHRITSVPETRVEVVSPIDLATGCFLKTTFCRSKTWTIHGTIIR-----FSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKHAMRLLVFEFMPNGNLRDCL----DGVLVEGMNWDTRVAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKTL 720
            S++I  + +SC     L + +I  +       +S + L    FL    C+  T T    I+         + +  ATD      I+G+G    VYR  L  G   AVK+        A+     E++ +  + H +++ L      F  +    L+++++MPNG+L D L     G  V  ++W  R  IA+G + GL YLH    P I+HRDIK  NIL+D ++   I D G+A+ L
Sbjct:  717 SAIIRKEFKSCKGQVKLSTWKIALIAAG--SSLSVLALLFALFLVLCRCKRGTKTEDANILAEEGLSLLLNKVLAATDNLDDKYIIGRGAHGVVYRASLGSGEEYAVKKLIFAEHIRANQNMKREIETIGLVRHRNLIRL----ERFWMRKEDGLMLYQYMPNGSLHDVLHRGNQGEAV--LDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARIL 946          
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.195e-19
Identity = 61/196 (31.12%), Postives = 93/196 (47.45%), Query Frame = 1
Query:  211 IIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKHAMRLLVFEFMPNGNLRDCL--------------------------DGVLVEG--MNWDTRVAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAK 714
            ++  ++S L  AT  F    ++  G    VYRG L  G  VAVK     G   +D     E++ L R+ H ++VPL GYC         R+ ++E+M NGNL++ L                            +  EG    W  R  IA+G A  L +LH   +P I+HRD+K+S++ LD+N   +++D G+AK
Sbjct:  531 LLNITFSDLLSATSNFDRDTLLADGKFGPVYRGFLPGGIHVAVKVL-VHGSTLSDQEAARELEFLGRIKHPNLVPLTGYCI----AGDQRIAIYEYMENGNLQNLLHDLPFGVQTTDDWTTDTWEEETDNGTQNIGTEGPVATWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAK 721          
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.195e-19
Identity = 60/181 (33.15%), Postives = 94/181 (51.93%), Query Frame = 1
Query:  211 IIRFSYSALEHATDKFSGSNIVGQGGSSYVYRGQLTDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGKHAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTRVAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKTLKADGLPSCSXS 753
            I++     L  AT+ F   NIV    S   Y+  L DG  + VKR  +     ++  F +E++ L ++ H ++VPL+G+C          LLV++ M NG L   L    ++   W TRV +A+GAA GL +LH    P  +H+ I S+ ILLDE+ +A++ D G+ K + +      S S
Sbjct:  280 IVKIKLVDLIEATNGFDSGNIVVSSRSGVSYKADLPDGSTLEVKRLSSCC-ELSEKQFRSEINKLGQIRHPNLVPLLGFCVV----EDEILLVYKHMANGTLYSQLQQWDID---WPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDSSFS 452          
BLAST of EY659565 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.155e-19
Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 1
Query:  217 RFSYSALEHATDKFSGSNIVGQGGSSYVYRGQL-TDGRIVAVKRFKTQGGPNADSVFLTEVDMLSRLHHCHVVPLVGYCSEFRGK-HAMRLLVFEFMPNGNLRDCLDGVLVEGMNWDTR-------VAIAIGAAXGLEYLHEAAAPRILHRDIKSSNILLDENLNAKITDLGMAKTL 720
            + SY  L  AT +FS +N++G G    V++G L  + ++VAVK         A   F+ E +    + H ++V L+  CS    + +  R LV+EFMP G+L   L    +E +N  +R       + IAI  A  LEYLH      + H DIK SNILLD++L A ++D G+A+ L
Sbjct:  699 KVSYEELHSATSRFSSTNLIGSGNFGNVFKGLLGPENKLVAVKVLNLLKH-GATKSFMAECETFKGIRHRNLVKLITVCSSLDSEGNDFRALVYEFMPKGSLDMWLQLEDLERVNDHSRSLTPAEKLNIAIDVASALEYLHVHCHDPVAHCDIKPSNILLDDDLTAHVSDFGLAQLL 874          
The following BLAST results are available for this feature:
BLAST of EY659565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 299
Match NameE-valueIdentityDescription
Y1124_ARATH8.452e-2036.88Probable LRR receptor-like serine/threonine-protei... [more]
IRAK4_MOUSE1.104e-1936.16Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
CCR35_ARATH1.442e-1937.30Serine/threonine-protein kinase-like protein At3g5... [more]
IRAK4_HUMAN1.883e-1936.72Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
PUB33_ARATH2.459e-1934.44U-box domain-containing protein 33 OS=Arabidopsis ... [more]
RCH1_ARATH3.212e-1933.16LRR receptor-like serine/threonine-protein kinase ... [more]
PEPR2_ARATH3.212e-1928.99Leucine-rich repeat receptor-like protein kinase P... [more]
Y2242_ARATH4.195e-1931.12Probable LRR receptor-like serine/threonine-protei... [more]
Y1699_ARATH4.195e-1933.15Probable LRR receptor-like serine/threonine-protei... [more]
EFR_ARATH7.155e-1935.59LRR receptor-like serine/threonine-protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659565 ID=EY659565; Name=EY659565; organism=Citrus sinensis; type=EST; length=877bp
CTACGTCTATCGAAGGGCAAGTTCCATCTCCGATCATCTGTTATTTCTTC
GGATAAAGAAAGTTGCAACAGTGCTACCAACTTAATAAGTCACAGGATTA
CATCAGTTCCTGAAACTAGAGTTGAGGTTGTCTCCCCTATTGATCTTGCG
ACAGGCTGTTTCCTGAAGACTACATTTTGTAGGAGCAAAACATGGACTAT
ACATGGAACGATTATCCGATTCTCATACTCTGCTTTGGAACATGCAACAG
ATAAATTCTCTGGTTCCAATATTGTAGGACAAGGGGGAAGTAGCTATGTG
TATCGAGGTCAACTCACAGATGGTAGAATTGTGGCGGTTAAGCGATTCAA
AACTCAGGGAGGGCCTAATGCTGACTCTGTCTTTTTAACGGAGGTTGATA
TGTTATCAAGACTTCATCATTGTCATGTGGTGCCGTTGGTTGGCTACTGT
TCGGAGTTCCGTGGGAAACATGCTATGAGGCTACTGGTATTTGAGTTCAT
GCCTAATGGTAATCTGAGGGATTGTTTGGACGGGGTGTTGGTAGAGGGCA
TGAACTGGGATACTCGTGTAGCAATTGCAATTGGAGCTGCTANGGGTTTG
GAGTATCTACATGAAGCAGCTGCACCAAGAATTTTGCACAGAGACATCAA
ATCTTCAAATATACTTCTTGATGAGAATTTGAATGCAAAAATAACTGATC
TTGGTATGGCTAAAACGTTAAAAGCTGATGGCCTTCCCAGTTGTTCCAGN
TCTCCAGCAAGATGCAGGGAACATTTGGCTATTTTGCACCANATATGCTA
TGGTTGGAGAACGTCTTNATGTCAAAGTTTCAGTTTGGGGTAGTTTACTT
GACTTATACTGGTCGCACCAATTCTTT
back to top