EY659560

Overview
NameEY659560
Unique NameEY659560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_LISMO (Elongation factor Ts OS=Listeria monocytogenes GN=tsf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.708e-21
Identity = 74/213 (34.74%), Postives = 112/213 (52.58%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLE-GLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LRE+T A M D K ALV+ + D+E A+  LR++G   A+KKS R A+EG+  +  NE  A V+E+N ETDFV++N+ FQ             + V      +  V P+ LE  LK  + + +     TVQ+ ITE    +GEN+ LRR  +   +       Y+H +     GRI G+L+L  G   ++      V  ++ MHI A  P
Sbjct:    8 MVKELREKTGAGMMDCKKALVETEGDMEKAIDYLREKGIAKAAKKSDRVASEGMTHVISNEKHAVVLEVNAETDFVAKNDNFQ-------------QLVDALAKQILAVRPDSLEDALKTEMPNGQ-----TVQDYITEAITKIGENISLRRFEVKEKADNSAFGEYIHMN-----GRI-GVLTLLEGTTDTT------VAKDVAMHIAAINP 190          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_LISMH (Elongation factor Ts OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=tsf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.708e-21
Identity = 74/213 (34.74%), Postives = 112/213 (52.58%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLE-GLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LRE+T A M D K ALV+ + D+E A+  LR++G   A+KKS R A+EG+  +  NE  A V+E+N ETDFV++N+ FQ             + V      +  V P+ LE  LK  + + +     TVQ+ ITE    +GEN+ LRR  +   +       Y+H +     GRI G+L+L  G   ++      V  ++ MHI A  P
Sbjct:    8 MVKELREKTGAGMMDCKKALVETEGDMEKAIDYLREKGIAKAAKKSDRVASEGMTHVISNEKHAVVLEVNAETDFVAKNDNFQ-------------QLVDALAKQILAVRPDSLEDALKTEMPNGQ-----TVQDYITEAITKIGENISLRRFEVKEKADNSAFGEYIHMN-----GRI-GVLTLLEGTTDTT------VAKDVAMHIAAINP 190          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_LISMF (Elongation factor Ts OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tsf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.708e-21
Identity = 74/213 (34.74%), Postives = 112/213 (52.58%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLE-GLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LRE+T A M D K ALV+ + D+E A+  LR++G   A+KKS R A+EG+  +  NE  A V+E+N ETDFV++N+ FQ             + V      +  V P+ LE  LK  + + +     TVQ+ ITE    +GEN+ LRR  +   +       Y+H +     GRI G+L+L  G   ++      V  ++ MHI A  P
Sbjct:    8 MVKELREKTGAGMMDCKKALVETEGDMEKAIDYLREKGIAKAAKKSDRVASEGMTHVISNEKHAVVLEVNAETDFVAKNDNFQ-------------QLVDALAKQILAVRPDSLEDALKTEMPNGQ-----TVQDYITEAITKIGENISLRRFEVKEKADNSAFGEYIHMN-----GRI-GVLTLLEGTTDTT------VAKDVAMHIAAINP 190          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_LISMC (Elongation factor Ts OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=tsf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.708e-21
Identity = 74/213 (34.74%), Postives = 112/213 (52.58%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLE-GLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LRE+T A M D K ALV+ + D+E A+  LR++G   A+KKS R A+EG+  +  NE  A V+E+N ETDFV++N+ FQ             + V      +  V P+ LE  LK  + + +     TVQ+ ITE    +GEN+ LRR  +   +       Y+H +     GRI G+L+L  G   ++      V  ++ MHI A  P
Sbjct:    8 MVKELREKTGAGMMDCKKALVETEGDMEKAIDYLREKGIAKAAKKSDRVASEGMTHVISNEKHAVVLEVNAETDFVAKNDNFQ-------------QLVDALAKQILAVRPDSLEDALKTEMPNGQ-----TVQDYITEAITKIGENISLRRFEVKEKADNSAFGEYIHMN-----GRI-GVLTLLEGTTDTT------VAKDVAMHIAAINP 190          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_LISIN (Elongation factor Ts OS=Listeria innocua GN=tsf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.708e-21
Identity = 74/213 (34.74%), Postives = 112/213 (52.58%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLE-GLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LRE+T A M D K ALV+ + D+E A+  LR++G   A+KKS R A+EG+  +  NE  A V+E+N ETDFV++N+ FQ             + V      +  V P+ LE  LK  + + +     TVQ+ ITE    +GEN+ LRR  +   +       Y+H +     GRI G+L+L  G   ++      V  ++ MHI A  P
Sbjct:    8 MVKELREKTGAGMMDCKKALVETEGDMEKAIDYLREKGIAKAAKKSDRVASEGMTHVISNEKHAVVLEVNAETDFVAKNDNFQ-------------QLVDALAKQILEVRPDSLEDALKTEMPNGQ-----TVQDYITEAITKIGENISLRRFEVKEKADNSAFGEYIHMN-----GRI-GVLTLLEGTTDTT------VAKDVAMHIAAINP 190          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_ANAMM (Elongation factor Ts OS=Anaplasma marginale (strain St. Maries) GN=tsf PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.708e-21
Identity = 73/215 (33.95%), Postives = 108/215 (50.23%), Query Frame = 1
Query:   94 VNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGE-TTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            V  I++LR+ T A + D K AL  C  D+E A   LR++G   A KKS R A +GL+A+     K A+++L  ETDFV+RNE F+                ++  S L   G E L     +   P  GG   +V + +   AA++GE+V L     L    P V+ +Y+H +   G+GR   L++LE    ++  + L     +L MHIVA KP
Sbjct:    5 VEAIRELRQITGAGLGDCKEALETCSGDMEKAKVYLREKGLSKAYKKSHRDAADGLVAVRVEGDKGAILKLGSETDFVARNEKFR-------------SLAAELVSSLLKHGAEDLSSFSAS---PYDGGSGVSVADEVVNAAAVLGEHVVLSGIGFLELGGPGVIGSYIHGAVGEGIGRAGALVALEA--TTAKTEALLEFARQLAMHIVAAKP 201          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_PELUB (Elongation factor Ts OS=Pelagibacter ubique GN=tsf PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.231e-21
Identity = 70/214 (32.71%), Postives = 111/214 (51.87%), Query Frame = 1
Query:   94 VNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +  +KQLRE T A  KD  LA+ +   D++ A++ LR +G   ASKK SR A EG++A + +E+K ++IE+NCETDFV++N+ F              E  +Q  S L              L+  K+    TV++++  + A MGE + L +    S    +  + YLHT  +  L +++ + SLE  + S   + +K  G +L MHI A  P
Sbjct:    4 IEKVKQLREATGAGFKDCNLAIKESGGDLDKAVEILRVKGISKASKKMSRDAKEGVIATSGDENKISIIEINCETDFVAKNDDF------VSFAKELSELNNQNSSDL------------EKLNKSKMANGETVEDSLVALIAKMGEKITLGKAKTFSQPGSKNFN-YLHTVVKDNLSKLSVITSLETSNDS---EDVKAFGKQLSMHIAASNP 195          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_ANAMF (Elongation factor Ts OS=Anaplasma marginale (strain Florida) GN=tsf PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.231e-21
Identity = 72/215 (33.49%), Postives = 108/215 (50.23%), Query Frame = 1
Query:   94 VNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGE-TTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            V  I++LR+ T A + D K AL  C  D+E A   LR++G   A KKS R A +GL+A+     K A+++L  ETDFV+RNE F+                ++  S L   G E L     +   P  GG   +V + +   AA++GE++ L     L    P V+ +Y+H +   G+GR   L++LE    ++  + L     +L MHIVA KP
Sbjct:    5 VEAIRELRQITGAGLGDCKEALETCSGDMEKAKVYLREKGLSKAYKKSHRDAADGLVAVRVEGDKGAILKLGSETDFVARNEKFR-------------SLAAELVSSLLKHGAEDLSSFSAS---PYDGGSGVSVADEVVNAAAVLGEHIVLSGIGFLELGGPGVIGSYIHGAVGEGIGRAGALVALEA--TTAKTEALLEFARQLAMHIVAAKP 201          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_ROSDO (Elongation factor Ts OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=tsf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.913e-21
Identity = 69/212 (32.55%), Postives = 109/212 (51.42%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LR+ T A M D K AL + + D+EAA+  LR +G   A+KKS RTA EGL+A+         +E+N ETDFV +N  FQ                   G     +G   ++ L+       +GG+ TV+ A+ +  A++GEN+ +RR   +S+   E V +Y+H +   G+G+I  L++   GD        +  G ++ MHI A  P
Sbjct:    7 MVKELRDSTGAGMMDAKKALTENNGDMEAAVDWLRTKGLAKAAKKSGRTAAEGLVAVKVQGGHGVAVEVNSETDFVGKNADFQKMV---------------AGIADVALGASDIDALRA----ADMGGK-TVEQAVIDAVAVIGENMSVRR---MSSIDGENVVSYVHNAAAPGMGKIGVLVATNGGD--------EAFGKQVAMHIAAVNP 187          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_EHRRW (Elongation factor Ts OS=Ehrlichia ruminantium (strain Welgevonden) GN=tsf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.913e-21
Identity = 72/214 (33.64%), Postives = 110/214 (51.40%), Query Frame = 1
Query:   94 VNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +N IK+LR+ T A + D K AL  C+ DIE A   LR++G   A KKS++  ++GL+A+  + +K A++E+N ETDFV+RNE FQ                          G E +E   L  ++      T + + I    A++GEN+ L +   LS SS  VV  Y+H      LG++  +++LE    +   + LK    ++ MHIVA KP
Sbjct:    5 INAIKELRDLTGAGVGDCKDALTSCNGDIEKAKTYLREQGIAKAYKKSNKDVSDGLVAICIDGNKGAILEVNSETDFVARNEKFQKLVLNLAFLAN-------------QYGIENIEDF-LKCEY---ANNTNINDEIMSNIAVIGENIHLNKIGCLSVSS-GVVCGYIHNPIVDNLGKVGAIVALE---SNCDVEKLKIFARQIAMHIVATKP 197          
The following BLAST results are available for this feature:
BLAST of EY659560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTS_LISMO1.708e-2134.74Elongation factor Ts OS=Listeria monocytogenes GN=... [more]
EFTS_LISMH1.708e-2134.74Elongation factor Ts OS=Listeria monocytogenes ser... [more]
EFTS_LISMF1.708e-2134.74Elongation factor Ts OS=Listeria monocytogenes ser... [more]
EFTS_LISMC1.708e-2134.74Elongation factor Ts OS=Listeria monocytogenes ser... [more]
EFTS_LISIN1.708e-2134.74Elongation factor Ts OS=Listeria innocua GN=tsf PE... [more]
EFTS_ANAMM1.708e-2133.95Elongation factor Ts OS=Anaplasma marginale (strai... [more]
EFTS_PELUB2.231e-2132.71Elongation factor Ts OS=Pelagibacter ubique GN=tsf... [more]
EFTS_ANAMF2.231e-2133.49Elongation factor Ts OS=Anaplasma marginale (strai... [more]
EFTS_ROSDO2.913e-2132.55Elongation factor Ts OS=Roseobacter denitrificans ... [more]
EFTS_EHRRW2.913e-2133.64Elongation factor Ts OS=Ehrlichia ruminantium (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659560 ID=EY659560; Name=EY659560; organism=Citrus sinensis; type=EST; length=941bp
GACTTATTCTCATTCAAATACCTGAACCCAAAATCCTCTTTTGCTTTAAT
TTCAAGAAACTTCAGTGATCAAGCTCCTGCGGCTACGGAGCAAGTGAATC
TCATTAAGCAGTTAAGGGAACAAACAAGTGCTCCAATGAAGGATGTCAAG
TTGGCTCTTGTTGATTGCGATTGGGATATTGAGGCTGCACTGAAGGAATT
GAGGAAACGAGGGAAAGTTCTGGCGTCAAAGAAGTCGTCTCGAACTGCCA
CTGAGGGCTTACTTGCTTTAGCGCAGAATGAGAGCAAGGCTGCTGTTATT
GAGCTTAATTGTGAGACCGATTTTGTTTCCAGGAATGAGATATTTCAGTA
CTTGGCCTTAGCTTTGGCAAAGCAAGCTTTGGTGGCTGAGAATGTTTCAC
AGCCAGGATCTGGGCTCTTTCCTGTTGGTCCTGAGTATTTGGAGGGCTTG
AAGTTGAATCTTGATCATCCAAAAATAGGTGGAGAAACAACTGTCCAGAA
TGCAATTACTGAAGTAGCTGCAATTATGGGGGAGAATGTAAAACTTAGGA
GGGGTTTTTTACTATCTGCATCTTCACCTGAGGTTGTTTCTACCTACCTN
CACACAAGCCCTCAATCAGGTTTGGGTCGTATTGCTGGACTTCTATCTCT
TGAAGTAGGAGACGGAAGTTCATCATTCGATCCATTAAAGCGTGTAGGAT
CAGAATTGGGCATGCATATAGTTGCTCAAAAGCCATTATTTCTGACAAAG
GAGCTGTTTCTGCTGATGCTTTANAGAATGACGTGAAATTCTTAAATCTC
AGGCCGAAAGTACCAGGGAAGCCTTCATGGCGGATGAAAAATGGTGGAAG
GCGGTTGCGTAATACTATGAAAAATGGTCTGATGAACAAAAATTGGCTGA
CGATACTCTAATTTAAGACAATCTGAATATTCTTCAAGGAG
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