EY659555 | Citrus Genome Database

Overview


Name	EY659555
Unique Name	EY659555
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	897

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig5773	contig	Csv1_Contig5773:323..1218.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.136e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.136e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 112.464 bits (280), Expect = 1.114e-26
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD EGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58

HSP 4 Score: 29.261 bits (64), Expect = 1.114e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.531e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.443 bits (376), Expect = 2.531e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 111.309 bits (277), Expect = 2.458e-26
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD EGIPPDQQRLIFAGKQLEDGRTL+D
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58

HSP 4 Score: 29.261 bits (64), Expect = 2.458e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.306e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.058 bits (375), Expect = 3.306e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.923 bits (276), Expect = 3.200e-26
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQD EGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58

HSP 4 Score: 29.261 bits (64), Expect = 3.200e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.153 bits (274), Expect = 5.423e-26
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQD EGIPPDQQRLIFAGKQLEDGRTL+D
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58

HSP 4 Score: 29.261 bits (64), Expect = 5.423e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.153 bits (274), Expect = 5.423e-26
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQD EGIPPDQQRLIFAGKQLEDGRTL+D
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58

HSP 4 Score: 29.261 bits (64), Expect = 5.423e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.153 bits (274), Expect = 5.423e-26
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQD EGIPPDQQRLIFAGKQLEDGRTL+D
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58

HSP 4 Score: 29.261 bits (64), Expect = 5.423e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.153 bits (274), Expect = 5.423e-26
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQD EGIPPDQQRLIFAGKQLEDGRTL+D
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58

HSP 4 Score: 29.261 bits (64), Expect = 5.423e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.153 bits (274), Expect = 5.423e-26
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQD EGIPPDQQRLIFAGKQLEDGRTL+D
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58

HSP 4 Score: 29.261 bits (64), Expect = 5.423e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.364e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 7.364e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 109.768 bits (273), Expect = 7.060e-26
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QD EGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58

HSP 4 Score: 29.261 bits (64), Expect = 7.060e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.618e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 9.618e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 109.383 bits (272), Expect = 9.191e-26
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQD EGIPPDQQRLIFAGKQLEDGRTL+D
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58

HSP 4 Score: 29.261 bits (64), Expect = 9.191e-26
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of EY659555 vs. ExPASy Swiss-Prot

BLAST of EY659555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ARATH	1.136e-35	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	2.531e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	3.306e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	5.639e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	5.639e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	5.639e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	5.639e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	5.639e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	7.364e-35	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	9.618e-35	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-011-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659555 ID=EY659555; Name=EY659555; organism=Citrus sinensis; type=EST; length=897bp
ATTAAACTTTAAAAAAAAAAAAGAACAAAAAGCCCTTTAGTTTAGATACC
GAGGCTCCCAATCTCAGCCTTCCAACATGCAGATCTTTGTGAAAACTTTG
ACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTCCGACACGATCGACAA
CGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACCGGACCAGCAGC
GGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGAT
TACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCGG
CGGCATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCCTGG
AGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCGAAGATCCAGGAC
AAGGAAGGGATCCCCCCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGCA
GCTGGAGGACGGCCGCACCCTGGCCGATTATAACATCCAGAAGGAATCCA
CGCTCCACCTTGTGTTGCGCCTGAGGGGAGGAATGCAGATCTTCGTCAAG
ACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGACACGAT
CGACAACGTGAAGGCCAAGATCCAGGACATAGAGGGGATTCCTCCGGACC
AGCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTC
GCCGATACAACATTCAAAGGAGTCCACTCTCCACCTTTGTCTCCGTCTTC
GTGGTGGTGACTTCTAAAAAAATAATGTGGATGTGTCCGCCGTTTGATTG
GATGGCGCCTATAATATTAATTACGTGGGATTGGGCGCTTTGCTTAATTA
TTTTGGATTACAATTTGTAATGGCCAGCCGTTGGGCCTAATTCCTCT