EY659536 | Citrus Genome Database

Overview


Name	EY659536
Unique Name	EY659536
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	950

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig7645	contig	Csv1_Contig7645:13..964.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACT_TAESO (Actin OS=Taenia solium GN=ACT1 PE=3 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 5.170e-107
Identity = 187/213 (87.79%), Postives = 190/213 (89.20%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            M DEEV ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTGIVLDS DGV+H+VPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MGDEEVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVTHSVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 34.6538 bits (78), Expect = 5.170e-107
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  217 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPESLFQPSFLGMESAG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACT1_DIPDE (Actin-1/4 OS=Diphyllobothrium dendriticum GN=ACT1 PE=2 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 5.170e-107
Identity = 187/213 (87.79%), Postives = 190/213 (89.20%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            M DEEV ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTGIVLDS DGV+H+VPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MGDEEVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVTHSVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 34.6538 bits (78), Expect = 5.170e-107
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  217 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPESLFQPSFLGMESAG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACT1_BOMMO (Actin, muscle-type A1 OS=Bombyx mori PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 6.746e-107
Identity = 186/213 (87.32%), Postives = 192/213 (90.14%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            MCD++V ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG+M GMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDS DGVSHTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MCDDDVRALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGLMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 31.187 bits (69), Expect = 6.746e-107
Identity = 26/66 (39.39%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAA+S+SL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  217 LCYVALDFEQEMATAAASTSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACT8_XENLA (Actin, cytoplasmic type 8 OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 6.746e-107
Identity = 185/213 (86.85%), Postives = 192/213 (90.14%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            M +EE++ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MAEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 32.7278 bits (73), Expect = 6.746e-107
Identity = 27/64 (42.19%), Postives = 32/64 (50.00%), Query Frame = 3

Query:  717 FVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  219 YVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_XENBO (Actin, cytoplasmic 1 OS=Xenopus borealis GN=actb PE=3 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 6.746e-107
Identity = 184/213 (86.38%), Postives = 192/213 (90.14%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            M D++++ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 33.4982 bits (75), Expect = 6.746e-107
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  217 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTM_PISOC (Actin, muscle OS=Pisaster ochraceus PE=3 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 8.802e-107
Identity = 187/213 (87.79%), Postives = 192/213 (90.14%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            MCDE+V+ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV D+ DGVSHTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDTGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 30.0314 bits (66), Expect = 8.802e-107
Identity = 24/66 (36.36%), Postives = 32/66 (48.48%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L + A    QEM TA+SSSSL+        K Y           N+RFRC E  +  +F+G+E  G
Sbjct:  217 LCYTALDFEQEMQTASSSSSLE--------KSYELPDGQVITIGNERFRCPETLFQPAFIGMESAG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACT1_AEDAE (Actin-1 OS=Aedes aegypti GN=ACT-1 PE=2 SV=2)

HSP 1 Score: 378.252 bits (970), Expect = 8.802e-107
Identity = 186/213 (87.32%), Postives = 191/213 (89.67%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            MCDE+ +ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMG KDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDS DGVSHTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MCDEDAAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 31.187 bits (69), Expect = 8.802e-107
Identity = 26/66 (39.39%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAA+S+SL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  217 LCYVALDFEQEMATAAASTSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTG_TRISC (Actin, cytoplasmic 2 OS=Triakis scyllium GN=actg1 PE=2 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 8.802e-107
Identity = 185/211 (87.68%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D+E++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 8.802e-107
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_CYPCA (Actin, cytoplasmic 1 OS=Cyprinus carpio GN=actb PE=3 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 8.802e-107
Identity = 185/211 (87.68%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D+E++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 8.802e-107
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMGTAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_CTEID (Actin, cytoplasmic 1 OS=Ctenopharyngodon idella GN=actb PE=3 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 8.802e-107
Identity = 185/211 (87.68%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D+E++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 8.802e-107
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMGTAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

The following BLAST results are available for this feature:

BLAST of EY659536 vs. ExPASy Swiss-Prot

BLAST of EY659536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 455


Match Name	E-value	Identity	Description
ACT_TAESO	5.170e-107	87.79	Actin OS=Taenia solium GN=ACT1 PE=3 SV=1	[more]
ACT1_DIPDE	5.170e-107	87.79	Actin-1/4 OS=Diphyllobothrium dendriticum GN=ACT1 ...	[more]
ACT1_BOMMO	6.746e-107	87.32	Actin, muscle-type A1 OS=Bombyx mori PE=3 SV=1	[more]
ACT8_XENLA	6.746e-107	86.85	Actin, cytoplasmic type 8 OS=Xenopus laevis PE=3 S...	[more]
ACTB_XENBO	6.746e-107	86.38	Actin, cytoplasmic 1 OS=Xenopus borealis GN=actb P...	[more]
ACTM_PISOC	8.802e-107	87.79	Actin, muscle OS=Pisaster ochraceus PE=3 SV=1	[more]
ACT1_AEDAE	8.802e-107	87.32	Actin-1 OS=Aedes aegypti GN=ACT-1 PE=2 SV=2	[more]
ACTG_TRISC	8.802e-107	87.68	Actin, cytoplasmic 2 OS=Triakis scyllium GN=actg1 ...	[more]
ACTB_CYPCA	8.802e-107	87.68	Actin, cytoplasmic 1 OS=Cyprinus carpio GN=actb PE...	[more]
ACTB_CTEID	8.802e-107	87.68	Actin, cytoplasmic 1 OS=Ctenopharyngodon idella GN...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-011-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659536 ID=EY659536; Name=EY659536; organism=Citrus sinensis; type=EST; length=950bp
CTCAAGTTTTGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTATCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGC
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGATAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAATAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCACGAGATGGTGTNTCCCACA
CAGTGCCAATCTATGAATGCTATGCCTTACCTCATGCTATNCTACGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGGTACAGTCTCACAGCCACAGCTGAAAGAGAACATCGCCGCGATA
TCATAGATAATTATGGTTTGTAGCTTTTTAACTTTGACAGGAAATGGNCA
CCGCTGCTTCCTCAAGCTCCCTAAAAAATCCTATGATTTGCCTGATGGTC
AAGGAATACAATTGAAACCAAAGGTTCCGTTGCCAAGAGCCCTATCCAAC
CTCATTCTTGGGTTTGGAACTGGGGGGGCCCTGGAACCCTCCCACCCATT
TTGAATATGGAGGTGTATTCGGAAAATTGGATGCCACACATCCCTCTTGA