EY659535 | Citrus Genome Database

Overview


Name	EY659535
Unique Name	EY659535
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	941

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTB_CHICK (Actin, cytoplasmic 1 OS=Gallus gallus GN=ACTB PE=1 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 7.543e-97
Identity = 170/198 (85.86%), Postives = 180/198 (90.91%), Query Frame = 1

Query:   70 DE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            D+ +AALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199

HSP 2 Score: 31.9574 bits (71), Expect = 7.543e-97
Identity = 25/65 (38.46%), Postives = 33/65 (50.77%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  212 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTB_CERAE (Actin, cytoplasmic 1 OS=Cercopithecus aethiops GN=ACTB PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 7.543e-97
Identity = 170/198 (85.86%), Postives = 180/198 (90.91%), Query Frame = 1

Query:   70 DE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            D+ +AALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199

HSP 2 Score: 31.9574 bits (71), Expect = 7.543e-97
Identity = 25/65 (38.46%), Postives = 33/65 (50.77%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  212 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTB_CAVPO (Actin, cytoplasmic 1 OS=Cavia porcellus GN=ACTB PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 7.543e-97
Identity = 170/198 (85.86%), Postives = 180/198 (90.91%), Query Frame = 1

Query:   70 DE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            D+ +AALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199

HSP 2 Score: 31.9574 bits (71), Expect = 7.543e-97
Identity = 25/65 (38.46%), Postives = 33/65 (50.77%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  212 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTB_CANFA (Actin, cytoplasmic 1 OS=Canis familiaris GN=ACTB PE=2 SV=3)

HSP 1 Score: 344.354 bits (882), Expect = 7.543e-97
Identity = 170/198 (85.86%), Postives = 180/198 (90.91%), Query Frame = 1

Query:   70 DE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            D+ +AALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199

HSP 2 Score: 31.9574 bits (71), Expect = 7.543e-97
Identity = 25/65 (38.46%), Postives = 33/65 (50.77%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  212 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTB_BOVIN (Actin, cytoplasmic 1 OS=Bos taurus GN=ACTB PE=1 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 7.543e-97
Identity = 170/198 (85.86%), Postives = 180/198 (90.91%), Query Frame = 1

Query:   70 DE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            D+ +AALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199

HSP 2 Score: 31.9574 bits (71), Expect = 7.543e-97
Identity = 25/65 (38.46%), Postives = 33/65 (50.77%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  212 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACT_BRUMA (Actin OS=Brugia malayi PE=1 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 7.543e-97
Identity = 170/200 (85.00%), Postives = 181/200 (90.50%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            M DE VAALV+DNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIVLD+G+ V H+VPIYE YA+PHAIL LD AGRDLTDYLMKILT+RG S
Sbjct:    1 MGDEEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDTGDGVTHSVPIYEGYALPHAILRLDLAGRDLTDYLMKILTDRGYS 200

HSP 2 Score: 33.113 bits (74), Expect = 7.543e-97
Identity = 25/71 (35.21%), Postives = 35/71 (49.30%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHEPPHTKM 902
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE  +  +
Sbjct:  213 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESTGIHETTYNSI 283

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTB1_DANRE (Actin, cytoplasmic 1 OS=Danio rerio GN=actba PE=2 SV=2)

HSP 1 Score: 345.51 bits (885), Expect = 9.841e-97
Identity = 171/198 (86.36%), Postives = 180/198 (90.91%), Query Frame = 1

Query:   70 DE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            DE +AALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    2 DEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199

HSP 2 Score: 30.4166 bits (67), Expect = 9.841e-97
Identity = 24/65 (36.92%), Postives = 32/65 (49.23%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EM TAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  212 IKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACT_HYDAT (Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 9.841e-97
Identity = 171/200 (85.50%), Postives = 181/200 (90.50%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            M D+ VAALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFN+P MYVAIQAVLSLYASG TTGIVLDSG+ V HTVPIYE YA+PHAI+ LD AGRDLTDYLMKILTERG S
Sbjct:    1 MADDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS 200

HSP 2 Score: 30.8018 bits (68), Expect = 9.841e-97
Identity = 24/71 (33.80%), Postives = 34/71 (47.89%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHEPPHTKM 902
            I +K+   ALDF  EM TAA  S  +K+ +   G    I N+RFRC    +     G  + G HE  +  +
Sbjct:  213 IKEKLSYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSI 283

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACT8_XENLA (Actin, cytoplasmic type 8 OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.284e-96
Identity = 170/200 (85.00%), Postives = 181/200 (90.50%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            M +E +AALV+DNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    1 MAEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200

HSP 2 Score: 30.0314 bits (66), Expect = 1.284e-96
Identity = 25/65 (38.46%), Postives = 32/65 (49.23%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K    ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  213 IKEKPCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 277

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTG_XENLA (Actin, cytoplasmic 2 OS=Xenopus laevis GN=actg1 PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 1.284e-96
Identity = 169/198 (85.35%), Postives = 180/198 (90.91%), Query Frame = 1

Query:   70 DE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            +E +AALV+DNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199

HSP 2 Score: 31.9574 bits (71), Expect = 1.284e-96
Identity = 25/65 (38.46%), Postives = 33/65 (50.77%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  212 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276

The following BLAST results are available for this feature:

BLAST of EY659535 vs. ExPASy Swiss-Prot

BLAST of EY659535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451


Match Name	E-value	Identity	Description
ACTB_CHICK	7.543e-97	85.86	Actin, cytoplasmic 1 OS=Gallus gallus GN=ACTB PE=1...	[more]
ACTB_CERAE	7.543e-97	85.86	Actin, cytoplasmic 1 OS=Cercopithecus aethiops GN=...	[more]
ACTB_CAVPO	7.543e-97	85.86	Actin, cytoplasmic 1 OS=Cavia porcellus GN=ACTB PE...	[more]
ACTB_CANFA	7.543e-97	85.86	Actin, cytoplasmic 1 OS=Canis familiaris GN=ACTB P...	[more]
ACTB_BOVIN	7.543e-97	85.86	Actin, cytoplasmic 1 OS=Bos taurus GN=ACTB PE=1 SV...	[more]
ACT_BRUMA	7.543e-97	85.00	Actin OS=Brugia malayi PE=1 SV=1	[more]
ACTB1_DANRE	9.841e-97	86.36	Actin, cytoplasmic 1 OS=Danio rerio GN=actba PE=2 ...	[more]
ACT_HYDAT	9.841e-97	85.50	Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1	[more]
ACT8_XENLA	1.284e-96	85.00	Actin, cytoplasmic type 8 OS=Xenopus laevis PE=3 S...	[more]
ACTG_XENLA	1.284e-96	85.35	Actin, cytoplasmic 2 OS=Xenopus laevis GN=actg1 PE...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-011-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659535 ID=EY659535; Name=EY659535; organism=Citrus sinensis; type=EST; length=941bp
CTCAAGTGTTTTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAATAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTCTGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCACA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAACGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTCTTGTTGGATATGAAGCTCAATCTAATA
TAGGTGTCCTTACCTTGAAATACCCCATGGAACACGGTGTTGGCACATAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACATTGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTGACAGAGAAAAGATGACCCAAATCATGTTTGAGACCTTCAAC
ACACCCGGCATGTATGTAGCTATACAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCATACCACTGGTATCGTTCTTGATTCAGGAGAGTGTGTTTTCCACA
CAGTGCCAATCTATGAATGTTATGCCATACCTCATGCTATCCTCCCTTTG
GACTAGGCTGGTCGGGACTTGACCGACTACCTTATGAAGATCCTTACAGA
AAGAGGTACCAGTTCACACCACATCTGAAATAGAAATCGGACGGGATATC
AAAGAAAATTCTGGTTGGGGCGTTAGACTTTTCACCAGAAATGGCCACCG
CTGCTTACTGAAGCTGCCCTAAAAAAACCTAGGATTGCCTGAGGGGCAGT
AATCCCATTCGAAACAAAAGGTTCCGGTGCCATTAACCCTATTCCTCCAT
AATTTTTGGGTATGGAACCCGGGGGTTCCATGAACCACCTCACACCAAAA
TGAAAGGGAGGGGATTCCGCAAAAATGGATGCCAACCAGCT