EY659523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_SACHY (50S ribosomal protein L33, chloroplastic OS=Saccharum hybrid GN=rpl33 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.342e-17 Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 3 Query: 291 MANGKDVLLRVIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 MA GKDV +RVI+EC VR G N ES G+S Y TQ NRH+TP +LEL KFC YC KHT H EI K Sbjct: 1 MAKGKDVRIRVILECISCVRKGTNKESTGISRYSTQKNRHNTPGQLELRKFCRYCRKHTTHNEIKK 66
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_MAIZE (50S ribosomal protein L33, chloroplastic OS=Zea mays GN=rpl33 PE=3 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 9.342e-17 Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 3 Query: 291 MANGKDVLLRVIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 MA GKDV +RVI+EC VR G N ES G+S Y TQ NRH+TP +LEL KFC YC KHT H EI K Sbjct: 1 MAKGKDVRIRVILECISCVRKGTNKESTGISRYSTQKNRHNTPGQLELRKFCRYCRKHTTHNEIKK 66
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_EPIVI (50S ribosomal protein L33, plastid OS=Epifagus virginiana GN=rpl33 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.220e-16 Identity = 40/66 (60.61%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 291 MANGKDVLLRVIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 MA KD + VI+ECT +RN N G+S YITQ NR +TP RLEL KFCPYCYKH +HGEI K Sbjct: 1 MAKSKDARVAVILECTSCIRNSVNKVLTGISRYITQKNRRNTPNRLELRKFCPYCYKHMIHGEIKK 66
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_BRADI (50S ribosomal protein L33, chloroplastic OS=Brachypodium distachyon GN=rpl33 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.594e-16 Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 291 MANGKDVLLRVIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 MA GKDV +RVI+EC VR GAN+ES G+S Y T+ NRH+TP +LE KFC YC KHT H EI K Sbjct: 1 MAKGKDVRIRVILECISCVRKGANEESTGISRYSTEKNRHNTPGQLEFKKFCRYCRKHTTHHEIKK 66
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_LOTJA (50S ribosomal protein L33, chloroplastic OS=Lotus japonicus GN=rpl33 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.637e-16 Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 3 Query: 291 MANGKDVLLRVIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 MA GKD+ + VI+ECT + N ES G+S YITQ NRH+TP RLELIKFCP C KH +H EI K Sbjct: 1 MAKGKDIRIIVILECTGCDQKSVNKESSGISRYITQKNRHNTPSRLELIKFCPCCRKHMIHAEIKK 66
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_CYCTA (50S ribosomal protein L33, chloroplastic OS=Cycas taitungensis GN=rpl33 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.909e-16 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 291 MANGKDVLLRVIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 MA G DV +++ +ECT R+ + + GVS YITQ NR +TP+R EL KFCPYCYKHT+HGEI K Sbjct: 1 MAKGGDVRVKITLECTSCTRDSVDKKYPGVSRYITQKNRRNTPIRSELKKFCPYCYKHTIHGEIKK 66
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_CUSGR (50S ribosomal protein L33, plastid OS=Cuscuta gronovii GN=rpl33 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.033e-15 Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 3 Query: 291 MANGKDVLLRVIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 M K V ++I+ECT VRN N S+GVS YITQ NRH+TP RLEL KFCP CYKH +HGEI K Sbjct: 1 MEKKKGVRGKIILECTGCVRNSHNRVSKGVSRYITQKNRHNTPNRLELKKFCPRCYKHIIHGEIKK 66
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_CUSOB (50S ribosomal protein L33, plastid OS=Cuscuta obtusiflora GN=rpl33 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.762e-15 Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 321 VIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 +I+ECT VRN N S+GVS YITQ NRH+TP RLEL KFCP+CYKH +HGEI K Sbjct: 11 IILECTGCVRNSHNRVSKGVSRYITQKNRHNTPNRLELKKFCPHCYKHIIHGEIKK 66
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_CRYJA (50S ribosomal protein L33, chloroplastic OS=Cryptomeria japonica GN=rpl33 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.301e-15 Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 291 MANGKDVLLRVIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 MA G +V + + +ECT ++ N +S G+S Y T+ NR +TP+RLEL KFCPYCYKHT+HGEI K Sbjct: 1 MAKGGNVRVTITLECTSCTQDSVNKKSPGISRYTTRKNRRNTPLRLELKKFCPYCYKHTIHGEIKK 66
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_LEMMI (50S ribosomal protein L33, chloroplastic OS=Lemna minor GN=rpl33 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.005e-15 Identity = 41/68 (60.29%), Postives = 47/68 (69.12%), Query Frame = 3 Query: 291 MANGKDVLLRVIVECTM--RVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488 MA GKDV +RVI+EC R NG E GVS Y+TQ NRH+TP RLEL KFC YC KHT+H E+ K Sbjct: 1 MAKGKDVRVRVILECNSCGRNENGVTKEVPGVSRYVTQKNRHNTPSRLELKKFCRYCNKHTIHVEVKK 68 The following BLAST results are available for this feature:
BLAST of EY659523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659523 ID=EY659523; Name=EY659523; organism=Citrus sinensis; type=EST; length=916bpback to top |