EY659523

Overview
NameEY659523
Unique NameEY659523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_ANGEV (50S ribosomal protein L33, chloroplastic OS=Angiopteris evecta GN=rpl33 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.016e-11
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 3 
Query:  291 MANGKDVLLRVIVECTMRVRNGANDESRGVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488
            MA  KDV + + +EC    RN ++    GVS Y T+ N+ +TP RLEL KFCPYC +HT+H E+ K
Sbjct:    1 MAKSKDVRVTITLECISCDRNNSDKRFPGVSRYTTRKNQRNTPTRLELKKFCPYCSEHTIHRELKK 66
[Close]
BLAST of EY659523 vs. ExPASy Swiss-Prot
Match: RK33_MARPO (50S ribosomal protein L33, chloroplastic OS=Marchantia polymorpha GN=rpl33 PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.865e-11
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 3 
Query:  291 MANGKDVLLRVIVECTMRVRNGANDESR--GVSIYITQNNRHSTPMRLELIKFCPYCYKHTLHGEITK 488
            MA  KD+ + + +EC   +    NDE R  G+S Y TQ NR +TP+RLEL KFC YC KHT+H EI K
Sbjct:    1 MAKSKDIRVTINLEC---INCAQNDEKRKKGISRYTTQKNRRNTPIRLELKKFCCYCNKHTIHKEIKK 65
The following BLAST results are available for this feature:
BLAST of EY659523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
RK33_ANGEV2.016e-1148.4850S ribosomal protein L33, chloroplastic OS=Angiop... [more]
RK33_MARPO5.865e-1151.4750S ribosomal protein L33, chloroplastic OS=Marcha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-A12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659523 ID=EY659523; Name=EY659523; organism=Citrus sinensis; type=EST; length=916bp
GCAAAGATTACGGAAATCGAAATATGGGGTGGGGCAGAGTATTCTCCACT
ACAATATCCTTAGATGAAATACTGGACTGCGATTCAGCAATATAGTTAGA
AATTCTTGTGTCACTTATTATTTTTTATTGTGAGATCCTATTTATTGACT
ATATTGATTGCAATAAAATCTTTATTTCATAAGTTTTCTTGGAGTGGTTA
GCGACTTCTATTTTTTTGTGCCGACGCTTCTTATTCGTAGCGGGTCGGAA
AATAAAATAGCTGGGTGAATCAAAAACCCCAATGAGGCTGATGGCCAACG
GTAAGGACGTCCTATTAAGGGTTATTGTGGAATGTACTATGAGAGTTCGA
AACGGTGCCAATGACGAATCAAGGGGTGTTTCCATATATATTACTCAGAA
TAATCGACACAGTACACCCATGCGATTGGAATTGATAAAATTCTGTCCCT
ATTGTTACAAGCATACACTTCATGGGGAGATAACAAAATAGATTGAGTCA
AGCCTGGTGCTTTTGTGCCACCCTTCCGAGGGACATGACATACTACTCTA
TATGTATATCTACATTATCTCATATATCTTAATGAGAACATATATATAAG
TGTATACATACCAGATGCTATGATCGATGCTATAAATCATTGTTTGATTT
CATCGAAATGAGACTCTACGGATAAGGAATAAACAAATTATGGATAGAAC
CAAGCGACTCATTGCTAAATGCAAGCGATATATGGGTAGGCGGTTGCCCA
CGATCCAATCGTGGATCGAATTGATATACAAACCTGACTTGATTAGTCGA
TTCCTATTGGACAGGGAAAATTTATCTAGGCGGCGAATAGATGGACTTCA
AGAGCACGATCATTCCTATTGCTATAAACAGGCTCGATTTATGTTGGTAC
TTTCTTATATGCCAAA
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