EY659477

Overview
NameEY659477
Unique NameEY659477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_CHLTR (60 kDa chaperonin OS=Chlamydia trachomatis GN=groL PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.111e-54
Identity = 109/230 (47.39%), Postives = 159/230 (69.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG+ +EN ++  LG A+KV + K+ TTI+     K+ ++AR   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA            +     GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  293 AILTGGQLISEELGMKLENANLAMLGKAKKVIVSKEDTTIVEGMGEKEALEARCESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_CHLTB (60 kDa chaperonin OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.111e-54
Identity = 109/230 (47.39%), Postives = 159/230 (69.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG+ +EN ++  LG A+KV + K+ TTI+     K+ ++AR   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA            +     GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  293 AILTGGQLISEELGMKLENANLAMLGKAKKVIVSKEDTTIVEGMGEKEALEARCESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_CHLTA (60 kDa chaperonin OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=groL PE=2 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 1.111e-54
Identity = 109/230 (47.39%), Postives = 159/230 (69.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG+ +EN ++  LG A+KV + K+ TTI+     K+ ++AR   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA            +     GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  293 AILTGGQLISEELGMKLENANLAMLGKAKKVIVSKEDTTIVEGMGEKEALEARCESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_CHLT2 (60 kDa chaperonin OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.111e-54
Identity = 109/230 (47.39%), Postives = 159/230 (69.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG+ +EN ++  LG A+KV + K+ TTI+     K+ ++AR   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA            +     GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  293 AILTGGQLISEELGMKLENANLAMLGKAKKVIVSKEDTTIVEGMGEKEALEARCESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_ARTS2 (60 kDa chaperonin 2 OS=Arthrobacter sp. (strain FB24) GN=groL2 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.451e-54
Identity = 116/233 (49.79%), Postives = 161/233 (69.10%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVH---LSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            AT+TGA+  + +LGL +++  +E LGTAR++T+ KD+TTI+  A + +++ AR+AQL+ EL  TDS +D EKL ER+AKL+GG+ VIKVGAATE EL+++K RIEDA ++T AA+EEGIV GGG+AL+H     D  PA+     DA   +G  IV++ALV P   IA NA             S    G+NA +  YE+++ AGVIDP KVTR AL+NAAS+A +VLTT+ +
Sbjct:  290 ATLTGAQVVSPELGLSLDSVGLEVLGTARRITVTKDNTTIVDGAGTAEDVAARVAQLRAELTRTDSDWDKEKLQERLAKLAGGIGVIKVGAATEVELKEKKHRIEDAVSSTRAALEEGIVAGGGSALIHALKALDEDPAVTALEGDAASAVG--IVRRALVQPLRWIAQNAGFDGYVVAAKVAESAVNQGFNAKSGDYEDLIAAGVIDPVKVTRAALRNAASIAALVLTTETL 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_SYNWW (60 kDa chaperonin OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.895e-54
Identity = 116/230 (50.43%), Postives = 158/230 (68.70%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +T  +  + +LG+ +EN S++ LG AR++ I+KD T I+  A S+  I+ R A +K++L ET+S YD EKL ER+AKLSGGVAVI+VGAATETEL++RK RIEDA  AT AA+EEGIV GGG  L++    + AI+      DE  G ++V+KA+  P   IA+NA             +E   GYNA+T  YE+M+ AG+IDPAKVTR A+QNAAS++ MVLTT+A+
Sbjct:  292 AILTNGQVASEELGVKMENVSLDMLGKARQIVIKKDETIIVDGAGSEQAIRDRSANIKRQLEETESEYDREKLQERLAKLSGGVAVIQVGAATETELKERKHRIEDALAATKAAVEEGIVSGGGVTLINA---IKAIEKIEAQGDELTGINLVKKAMEEPLRQIANNAGIEGSVVVEKVKEAETGIGYNALTGVYESMIAAGIIDPAKVTRSAVQNAASISAMVLTTEAV 518          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_STAS1 (60 kDa chaperonin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.895e-54
Identity = 114/230 (49.57%), Postives = 159/230 (69.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TGA+    DLGL ++  +++ LGTA K  I KD+TT++     ++ I AR++Q+K ++ ETDS +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG A +++ + V  I+    + D   G +IV KAL AP   IA NA             ++   G+NA T+++ NML+AG++DP KVTR +LQ+AASVA M LTT+A+
Sbjct:  291 AILTGAQVITDDLGLELKEATMDMLGTANKAEITKDNTTVVDGDGDQNSIDARVSQIKAQIEETDSEFDKEKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTAFMNIYEKVAKIE---AEGDIATGINIVLKALEAPVRQIAENAGLEGSIIVERLKNADIGVGFNAATNEWVNMLEAGIVDPTKVTRSSLQHAASVAAMFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_DESAA (60 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groL PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.895e-54
Identity = 111/230 (48.26%), Postives = 158/230 (68.70%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + D+G+ +EN S+  LG  ++V+I KD+TTI+  A ++  ++ R+ Q++ ++ +T S YD EKL ER+AKL GGVAVI VGAATE E++++K R+EDA NAT AA+EEGIVPGGG ALV   D V   K      ++++GA +V +AL AP  +IA+NA             +E + GYNA TD YE++++AGVIDP KV R ALQNA S+AG++LTT+A+
Sbjct:  292 AILTGGTVVSEDMGIKLENMSLADLGKCKRVSIDKDNTTIVDGAGARSALEGRVKQIRAQIDDTTSDYDREKLQERLAKLIGGVAVINVGAATEVEMKEKKARVEDALNATRAAVEEGIVPGGGVALVRAIDAVAKAK---ITGEQKIGARVVMRALEAPLRMIANNAGMEGSVVLDKVKNTEGSFGYNADTDTYEDLIEAGVIDPTKVVRLALQNACSIAGLMLTTEAM 518          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_HELMI (60 kDa chaperonin OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.475e-54
Identity = 113/230 (49.13%), Postives = 160/230 (69.57%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + ++G+ +++ +++ LG AR+V I+K+ T I+  A   D+I+ARIAQ++++  E+ S +D EKL ER+AKL+GGVAVI+VGAATETEL+D+KLRIEDA NAT AA+EEGIVPGGG ALV +   +  ++      DE  G  I+++AL  P   IA+NA            +     G+NA T+ YE+M+ AG++DPAKVTR ALQNAAS+A M+LTT+AI
Sbjct:  291 AILTGGRVVSEEVGIKLDSATIDMLGRARQVRIKKEETIIVDGAGRADDIKARIAQIRRQHEESTSEFDKEKLQERLAKLAGGVAVIQVGAATETELKDKKLRIEDALNATRAAVEEGIVPGGGTALVSIQKALDNVETPA--GDEATGVAIIRRALEEPLRQIANNAGYEGSVVVEKVKSLPVGQGFNAATEVYEDMIAAGIVDPAKVTRSALQNAASIAAMLLTTEAI 518          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BIFAS (60 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) GN=groL PE=3 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.475e-54
Identity = 116/230 (50.43%), Postives = 153/230 (66.52%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + DLGL +++  +   GTA+KV + KD TTI++   SK+++ AR+AQ++ E+ +TDS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA     AAIEEG+VPGGG ALV  ++ V   KD   + DE  GA IV   + AP   IA NA            +     G+NA TD YE+++ AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  291 AILTGGQVVSEDLGLKLDSIDLSVFGTAKKVIVSKDETTIVSGGGSKEDVAARVAQIRAEIEKTDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLVPGGGVALVQAAEKVE--KDFNLEGDEATGAAIVFSGIEAPIKQIAENAGLSGAVVIDKVRSLPEGEGFNAATDTYEDLMAAGVTDPVKVTRSALQNAASIAGLFLTTEAV 518          
The following BLAST results are available for this feature:
BLAST of EY659477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CHLTR1.111e-5447.3960 kDa chaperonin OS=Chlamydia trachomatis GN=groL... [more]
CH60_CHLTB1.111e-5447.3960 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_CHLTA1.111e-5447.3960 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_CHLT21.111e-5447.3960 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH602_ARTS21.451e-5449.7960 kDa chaperonin 2 OS=Arthrobacter sp. (strain FB... [more]
CH60_SYNWW1.895e-5450.4360 kDa chaperonin OS=Syntrophomonas wolfei subsp. ... [more]
CH60_STAS11.895e-5449.5760 kDa chaperonin OS=Staphylococcus saprophyticus ... [more]
CH60_DESAA1.895e-5448.2660 kDa chaperonin OS=Desulfatibacillum alkenivoran... [more]
CH60_HELMI2.475e-5449.1360 kDa chaperonin OS=Heliobacterium modesticaldum ... [more]
CH60_BIFAS2.475e-5450.4360 kDa chaperonin OS=Bifidobacterium animalis subs... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659477 ID=EY659477; Name=EY659477; organism=Citrus sinensis; type=EST; length=904bp
CGGNAATTACGCCTCGACCCACGCGTCCGCGAAAGATTATAGCTCTCCTT
CAAGATTTGCCACTGTGACTGGAGCTGAGTTTCAAGCTGGAGACCTGGGC
TTGCTTATTGAAAACACTTCAGTTGAGCAGCTAGGTACAGCTAGAAAGGT
GACCATCAGAAAGGACTCCACTACCATTATTGCTGATGCTGCATCAAAGG
ATGAAATACAAGCTAGAATTGCACAGCTGAAAAAGGAGTTGGCTGAGACG
GATTCTGTTTATGACTCAGAGAAACTTGCTGAGAGAATTGCTAAATTGTC
TGGCGGGGTTGCTGTTATTAAAGTTGGAGCTGCCACAGAAACTGAGCTTG
AGGACCGTAAACTCCGTATTGAAGATGCCAAGAATGCAACCTTTGCAGCC
ATAGAGGAAGGTATTGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTC
TGATCATGTTCCTGCTATCAAGGACAAGCTTGAAGATGCAGATGAGCGAT
TAGGTGCTGACATTGTGCAGAAGGCACTGGTAGCACCTGCATCACTGATA
GCTCACAATGCTGGAGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGC
TAGTGAATGGACGACTGGTTACAATGCAATGACAGACAAGTATGAGAACA
TGCTTCAGGCTGGAGTTATTGATCCTGCAAAGGTGACAAGATGTGCATTG
CAGAATGCGGCTTCAGTTGCAGGAATGGTCCTGACCACTCAGGCTATTGT
CGTGGAGAAGCCAAAGCCCAAAACTNCGGTAGCCGCTCCGCCACAAGGTC
TTATGGTGTAATCTCTAGGACTCTCCANATTTAGTTAGGGAGTTTATAGA
TGAAAGATGGGTTTATTGCCGTGACTGAAAAGAAAGTTTACTTAATTGAT
ATAA
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