EY659477

Overview
NameEY659477
Unique NameEY659477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:197..1099. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_ANASL (60 kDa chaperonin 2 OS=Anabaena sp. (strain L31) GN=groL2 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.942e-60
Identity = 123/230 (53.48%), Postives = 165/230 (71.74%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +T  +  + ++GL ++  S++ L TAR +TI K++TTI+A   +K EIQ RI Q++K+L ETDS YD EKL ERIAKL+GG+AVIKVGA  ETEL+DRKLRIE+A NAT AA+ E I PGGG  L++L+  V  IK   E+ +E++GADIV++AL AP   IA NA             S++  GYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AI
Sbjct:  291 AILTDGQLISEEIGLSLDTASIDALCTARTITIDKENTTIVAGTTTKPEIQKRIGQIRKQLEETDSEYDKEKLQERIAKLAGGIAVIKVGAVPETELKDRKLRIENALNATKAAVAESIGPGGGKTLIYLASKVDPIKAYFEE-EEKIGADIVKRALEAPLRQIADNAGEEGSVIVSRVKDSDFNVGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAI 519          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH601_THEVL (60 kDa chaperonin 1 OS=Thermosynechococcus vulcanus GN=groL1 PE=3 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 5.148e-60
Identity = 123/230 (53.48%), Postives = 160/230 (69.57%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +T  +  A D GL +EN  ++ LG AR++TI KD TTI+A+   K  ++AR  Q+++++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG  LVHL+  +     +    +E +GA+IV++AL AP   IA NA               +  GY+A  D+Y NM  AG++DPAKVTR ALQNAAS+AGMVLTT+ I
Sbjct:  292 AVLTAGQVIAEDAGLKLENAKLDMLGKARRITITKDHTTIVAEGNEK-AVKARCEQIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLVHLAPELSNWAAEHLTGEELIGANIVERALSAPLRRIAENAGQNGAIIVERVKEKPFDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECI 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH601_SYNJB (60 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.724e-60
Identity = 123/230 (53.48%), Postives = 161/230 (70.00%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG E  + + GL +EN  ++  GTAR+VT+ KD+TTI+A+  ++  ++AR  Q+++++ ETDS YD EKL ER+AKLSGGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG  L HL   V          DE +GA++V +AL AP   IA NA               + TGY+A  D + +M +AG++DPAKVTR ALQNAAS+AGMVLTT+AI
Sbjct:  292 AILTGGEVISEERGLKLENARLDSFGTARRVTVTKDNTTIVAEG-NEAAVKARCEQIRRQIEETDSTYDKEKLQERLAKLSGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLIPVVTEWAQANLSGDELVGANLVARALGAPLRRIAENAGQNGSIVLERVKDKPFNTGYDAQNDAFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTEAI 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_PROM9 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=groL2 PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.781e-60
Identity = 120/230 (52.17%), Postives = 162/230 (70.43%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +T  +    D GL +EN +++ LGT R++TI K++TTI+A+  ++  ++AR  Q+KK++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HLS  +    DK  + +E +GA+IV+ +L AP   IA NA            +  +  G+NA T +Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  292 AVLTNGQLITEDAGLKLENATLDMLGTGRRITINKETTTIVAEG-NEQAVKARCDQIKKQMDETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_SYNY3 (60 kDa chaperonin 2 OS=Synechocystis sp. (strain PCC 6803) GN=groL2 PE=1 SV=4)

HSP 1 Score: 230.335 bits (586), Expect = 1.147e-59
Identity = 123/232 (53.02%), Postives = 162/232 (69.83%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDE--IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + D+GL ++  S++QLG A K T+ KD+T ++A A  +    ++ RI QL+KE A +DS YD EK+ ERIAKL+GGVAVIKVGAATETEL+DRKLRIEDA NAT AA+EEGIVPGGG  L+ L+  + + K +L + +ER+ ADI+ KAL AP   +A NA             +    GYN +T K E+++ AG+IDPAKV R ALQNAAS+AGMVLTT+A+
Sbjct:  291 AILTGGSVISEDIGLSLDTVSLDQLGQAVKATLEKDNTILVAGADKRASAGVKERIEQLRKEYAASDSDYDKEKIQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIRLAGKIESFKAQLSNDEERVAADIIAKALEAPLHQLASNAGVEGSVIVEKVKEATGNQGYNVITGKIEDLIAAGIIDPAKVVRSALQNAASIAGMVLTTEAL 522          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_PROMS (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain AS9601) GN=groL2 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.147e-59
Identity = 120/230 (52.17%), Postives = 161/230 (70.00%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +T  +    D GL +EN +++ LGT R++TI K++TTI+A+  ++  ++AR  Q+KK++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HLS  +    DK  + +E +GA+IV+ +L AP   IA NA               +  G+NA T +Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  292 AVLTNGQLITEDAGLKLENATLDMLGTGRRITINKETTTIVAEG-NEQAVKARCDQIKKQMDETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_PROM0 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9301) GN=groL2 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.147e-59
Identity = 120/230 (52.17%), Postives = 161/230 (70.00%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +T  +    D GL +EN +++ LGT R++TI K++TTI+A+  ++  ++AR  Q+KK++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HLS  +    DK  + +E +GA+IV+ +L AP   IA NA               +  G+NA T +Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  292 AVLTNGQLITEDAGLKLENATLDMLGTGRRITINKETTTIVAEG-NEQAVKARCDQIKKQMDETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_THEEB (60 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groL PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.498e-59
Identity = 122/230 (53.04%), Postives = 159/230 (69.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +T  +    D GL +EN  ++ LG AR++TI KD TTI+A+   K  ++AR  Q+++++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG  LVHL+  +     +    +E +GA+IV++AL AP   IA NA               +  GY+A  D+Y NM  AG++DPAKVTR ALQNAAS+AGMVLTT+ I
Sbjct:  292 AVLTAGQVITEDAGLKLENAKLDMLGKARRITITKDHTTIVAEGNEK-AVKARCEQIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLVHLAPELSNWAAEHLTGEELIGANIVERALSAPLRRIAENAGQNGAIIVERVKEKPFDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECI 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_LACGA (60 kDa chaperonin OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=groL PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.956e-59
Identity = 125/230 (54.35%), Postives = 160/230 (69.57%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + DLGL +++T ++QLG A KVT+ KDSTTI+  A SKD I  R+ Q+KK++A+T S +D EKL ER+AKL+GGVAVIKVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV +   +     K +  D + G +IV KAL AP   IA NA              +   GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+
Sbjct:  291 AILTGGTVISSDLGLELKDTKIDQLGKAGKVTVTKDSTTIVEGAGSKDAISERVDQIKKQIADTTSDFDREKLQERLAKLAGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALVDVMKSIQG-NVKGDSQDAQTGVNIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEIGYNAATDKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAV 519          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_LACS1 (60 kDa chaperonin OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=groL PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.555e-59
Identity = 122/230 (53.04%), Postives = 167/230 (72.61%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            AT+TGA     DLGL +++T+VEQLG+A KVT+ K++TTI+  A  KD+I  R+ Q+KK+++ET S +D EKL ER+AKLSGGVAVIKVGAATETEL++RK RIEDA NAT AA+EEG VPGGG ALV++   V A++   E+ D + G +IV++AL  P   IA NA              +   G+NA T+++ +M++AG++DP KVTR ALQNAASV+ ++LTT+A+
Sbjct:  291 ATLTGATVITDDLGLQLKDTTVEQLGSAGKVTVTKENTTIVEGAGDKDKIAERVEQIKKQISETTSDFDREKLQERLAKLSGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGFVPGGGTALVNVIGKVAALE---EEGDVQTGINIVKRALEEPVRQIAENAGLEGSVIVEKLKEQKPGVGFNAATNEWVDMVEAGIVDPTKVTRSALQNAASVSALLLTTEAV 517          
The following BLAST results are available for this feature:
BLAST of EY659477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_ANASL3.942e-6053.4860 kDa chaperonin 2 OS=Anabaena sp. (strain L31) G... [more]
CH601_THEVL5.148e-6053.4860 kDa chaperonin 1 OS=Thermosynechococcus vulcanu... [more]
CH601_SYNJB6.724e-6053.4860 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 ... [more]
CH602_PROM98.781e-6052.1760 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_SYNY31.147e-5953.0260 kDa chaperonin 2 OS=Synechocystis sp. (strain P... [more]
CH602_PROMS1.147e-5952.1760 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM01.147e-5952.1760 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH60_THEEB1.498e-5953.0460 kDa chaperonin OS=Thermosynechococcus elongatus... [more]
CH60_LACGA1.956e-5954.3560 kDa chaperonin OS=Lactobacillus gasseri (strain... [more]
CH60_LACS12.555e-5953.0460 kDa chaperonin OS=Lactobacillus salivarius subs... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659477 ID=EY659477; Name=EY659477; organism=Citrus sinensis; type=EST; length=904bp
CGGNAATTACGCCTCGACCCACGCGTCCGCGAAAGATTATAGCTCTCCTT
CAAGATTTGCCACTGTGACTGGAGCTGAGTTTCAAGCTGGAGACCTGGGC
TTGCTTATTGAAAACACTTCAGTTGAGCAGCTAGGTACAGCTAGAAAGGT
GACCATCAGAAAGGACTCCACTACCATTATTGCTGATGCTGCATCAAAGG
ATGAAATACAAGCTAGAATTGCACAGCTGAAAAAGGAGTTGGCTGAGACG
GATTCTGTTTATGACTCAGAGAAACTTGCTGAGAGAATTGCTAAATTGTC
TGGCGGGGTTGCTGTTATTAAAGTTGGAGCTGCCACAGAAACTGAGCTTG
AGGACCGTAAACTCCGTATTGAAGATGCCAAGAATGCAACCTTTGCAGCC
ATAGAGGAAGGTATTGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTC
TGATCATGTTCCTGCTATCAAGGACAAGCTTGAAGATGCAGATGAGCGAT
TAGGTGCTGACATTGTGCAGAAGGCACTGGTAGCACCTGCATCACTGATA
GCTCACAATGCTGGAGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGC
TAGTGAATGGACGACTGGTTACAATGCAATGACAGACAAGTATGAGAACA
TGCTTCAGGCTGGAGTTATTGATCCTGCAAAGGTGACAAGATGTGCATTG
CAGAATGCGGCTTCAGTTGCAGGAATGGTCCTGACCACTCAGGCTATTGT
CGTGGAGAAGCCAAAGCCCAAAACTNCGGTAGCCGCTCCGCCACAAGGTC
TTATGGTGTAATCTCTAGGACTCTCCANATTTAGTTAGGGAGTTTATAGA
TGAAAGATGGGTTTATTGCCGTGACTGAAAAGAAAGTTTACTTAATTGAT
ATAA
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