EY659475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_EMENI (Tubulin beta-2 chain OS=Emericella nidulans GN=tubC PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.772e-17 Identity = 40/122 (32.79%), Postives = 70/122 (57.38%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +++ C ++RG V K+V + ++ K + FV+W P + + PP ++ A + NSTSV E+F+R+ ++F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RFLTCSTLFRGKVAMKEVEDQMRNMQNKYSSYFVEWIPNNVQTALCSMPPK--------GLKMAATFVGNSTSVQELFNRVSNQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLMSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_ARATH (Tubulin beta-2/beta-3 chain OS=Arabidopsis thaliana GN=TUBB2 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.772e-17 Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB1_PHYPO (Tubulin beta-1 chain OS=Physarum polycephalum GN=BETA PE=1 SV=4) HSP 1 Score: 89.3521 bits (220), Expect = 1.772e-17 Identity = 41/122 (33.61%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ AV I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPK--------GLKMAVTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB1_LUPAL (Tubulin beta-1 chain OS=Lupinus albus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.772e-17 Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_WHEAT (Tubulin beta-2 chain OS=Triticum aestivum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17 Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT + A + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GLSMASTFVGNSTSIQEMFRRVSEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_GEOCN (Tubulin beta-2 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17 Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ ++RG V K+V A+ T +TK + FV+W P + + PP + + I+NST+V E+F R ++F +M+ ++ F+HWY GEGME EFSEA+ DL L +Y Sbjct: 311 RYLTISTIFRGQVAMKEVEDAIHTARTKYSPYFVEWIPNNVQTSVCNVPPK--------GLTTSATFIANSTAVQELFERTANQFSVMFKRKGFLHWYTGEGMEPVEFSEAQSDLEDLILEY 424
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB1_PEA (Tubulin beta-1 chain OS=Pisum sativum GN=TUBB1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17 Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_ACRCO (Tubulin beta chain OS=Acremonium coenophialum GN=TUB2 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17 Identity = 40/122 (32.79%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPPR--------DLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB2_SOYBN (Tubulin beta-2 chain OS=Glycine max GN=TUBB2 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17 Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDIPPT--------GLRMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of EY659475 vs. ExPASy Swiss-Prot
Match: TBB_RHYSE (Tubulin beta chain OS=Rhynchosporium secalis PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.947e-17 Identity = 41/122 (33.61%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 3 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 368 +Y+ C ++RG V K+V + ++ K + FV+W PT + + PP ++ + + NSTS+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 309 RYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPTNVQTALCSIPPR--------GLKMSSTFVGNSTSIQELFKRIGDQFTRMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422 The following BLAST results are available for this feature:
BLAST of EY659475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659475 ID=EY659475; Name=EY659475; organism=Citrus sinensis; type=EST; length=644bpback to top |