EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_THET8 (Aminomethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gcvT PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 71/208 (34.13%), Postives = 107/208 (51.44%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            +KKT L++ H+  G +MV FAG+ +P+QY  SI+E  L  R+   +FDVSHM    ++GK+ + FL+     D   L  G    ++  NE GG +DD  + ++ ++   +VVNA    KDLAH++A  K F  +  D S    +  +             Q LT  DLS+    +     + G  + L  TG TGEDGFE+ +  E A
Sbjct:    1 MKKTPLYEAHLRLGARMVDFAGYLLPLQYT-SIVEEHLAVRRAVGVFDVSHMGEFLVRGKEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKDLAHLQALAKGFRVELEDAS----ERTALLALQGPKAASLLQGLTDLDLSQKRKNDVFPARVAGRPARLARTGYTGEDGFELFLAPEDA 203          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAHJ (Aminomethyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gcvT PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 71/202 (35.15%), Postives = 104/202 (51.49%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEF-RILDINGVSSLLTXTGSTGEDGFEI 796
            LKKT L+  +V +G K+V F GW+MP+Q+  SI E     R    +FDVSHM  +S+KG D   F++ L+  D   L       T   NE GG IDD V  K+ D+   L+VNA   DKD A ++ H   F  +  +VS    ++                 L   D+S++   +F + + + G + +L+ +G TGEDGFEI
Sbjct:    5 LKKTPLYQNYVDSGAKIVEFGGWAMPVQFT-SIKEEHNAVRYEVGMFDVSHMGEISIKGNDASKFVQYLLSNDTNNLTDTKAQYTALCNEEGGIIDDLVTYKIGDNDYLLIVNAANTDKDFAWVQKHAPKFDVEVSNVS----NQFGQLAVQGPKARDLVSGLVDIDVSEMKPFDFQQNVTLFGKNVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LISMH (Aminomethyltransferase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gcvT PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 71/218 (32.57%), Postives = 107/218 (49.08%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSXXXXXXXXXXXXXQHLTKDDLSKL-YFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            L KT +H  +   G K + F GW +P+Q+     E     R +  LFDVSHM  + ++G D   +L+ L+  D+  +  G     +   E GG++DD V+ K  +    LVVNA    KD   +  +++      GDVS  ++  E                 LT  DLS + +FG     D+ GV ++++ +G TGEDGFEI +PS  AG   +AIL
Sbjct:    4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVEGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTAKDFEWMVKNIQ------GDVSVTNVSSEYGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAIL 214          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FLAPJ (Aminomethyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=gcvT PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 72/209 (34.45%), Postives = 107/209 (51.20%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSL-LTXTGSTGEDGFEISVPSEPA 817
            +K TAL + H + G KMVPFAG++MP+QY+    E  +  R    +FDVSHM    LKG++ +  ++K+   D + L  G    +   N  GG +DD +I K+ D+H  LVVNA   +KD   I +H       G D+  ++ D  S             Q LT  DL  + +  F+I +  G+  + ++ TG TG  GFEI   +E A
Sbjct:    1 MKNTALTNIHESLGAKMVPFAGYNMPVQYEGVNAEHEI-VRTGVGVFDVSHMGEFFLKGENALALIQKVTSNDASKLVDGKAQYSCLPNNEGGIVDDLIIYKIADNHYMLVVNASNIEKDWNWISSH----NDLGVDMQ-NLSDSYSLLAIQGPKAAEAMQSLTSIDLVNMPYYSFQIGEFAGLKDVTVSATGYTGSGGFEIYFKNEDA 203          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FRAP2 (Aminomethyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=gcvT PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.174e-23
Identity = 74/231 (32.03%), Postives = 109/231 (47.19%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHL----TKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGLVA 880
            KT L++ H+A   KMV F+GWSMPI Y   I E   N R+N  +FDVSHM  + ++GKD   FL  ++  DVA L  G        N   G +DD +  K+  ++  +VVNAG R+ D+A    + +       DV        +             +H       ++++KL    F+       + +   TG TGEDGFEI +P++        +L+N    E AGL A
Sbjct:    3 KTPLYESHLAANAKMVDFSGWSMPINYGSQIQEHN-NVRENCGVFDVSHMLAVDIQGKDAEKFLRHILANDVAKLEAGKAQYGCMLNHEAGIVDDLITYKIDSENFRIVVNAGNRESDVAWFRENSQDL-----DVKITPQQNLAIVAVQGPKAVEIVKHTVTTEVAEEIAKLKPFTFKFFS----NWMFARTGYTGEDGFEIMLPADQVADFWDNLLEN--GAEPAGLGA 221          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_COLP3 (Aminomethyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvT PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.842e-23
Identity = 78/215 (36.28%), Postives = 98/215 (45.58%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            KT LH  H+A+G KMV F GW MPI Y   I E     R +  +FDVSHM  + ++G D   FL +LVI DVA LA PG    T   NE GG IDD +I    D    LVVN+  R KDLA +      F     D++     E                 L   +  +   G      +      +  TG TGEDG+EI VP+  A    Q +L
Sbjct:    4 KTVLHAKHLASGAKMVDFFGWDMPINYGSQIEEHHA-VRTDAGMFDVSHMTIVDVQGADAKAFLRRLVINDVAKLATPGKALYTGMLNEEGGVIDDLIIYFFSDTDYRLVVNSATRVKDLAWMTKQSTGF-----DITITERPEFGMLAVQGPEAKAKVAKLLTAEQIEAVEGMKPFFGVQVGDLFIATTGYTGEDGYEIIVPNNSAEDFWQKLL 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SERP5 (Aminomethyltransferase OS=Serratia proteamaculans (strain 568) GN=gcvT PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.324e-23
Identity = 71/206 (34.47%), Postives = 99/206 (48.06%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            K+T L+D HVA G +MV F GW MP+ Y   I E     RQ+  +FDVSHM  + L+G     FL  L+  DVA L  PG    T   N +GG IDD ++  + +D+  LVVN+  R+KDLA IE H   +      V+  + D+ +               L   +      G      +      +  TG TGE G+EI++P E
Sbjct:    3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHA-VRQDAGMFDVSHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYFRLVVNSATREKDLAWIEEHAAPY-----GVALTVRDDLALVAVQGPQAKERAATLFTPEQKSAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPKE 202          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_RUBXD (Aminomethyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=gcvT PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.324e-23
Identity = 73/213 (34.27%), Postives = 107/213 (50.23%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILD--INGVSSLLTXTGSTGEDGFEISVPSEPAGGP 826
            L++T L++ H A G ++V FAGW MP+QY     E     R    LFDVSHM  ++ +G D    L++L+  DV+ L  G         E+GG++DD VI   + +   +VVNA  R+KDLAH   H      +  D +    +E +             Q     DLS L  G +R L+  ++G  +++  TG TGEDGFE+ +   PA  P
Sbjct:    9 LRRTPLYEEHRALGARLVDFAGWEMPVQYAGIKAEHEA-VRTRAGLFDVSHMGEVAFRGPDAERALQRLLTRDVSRLGEGQAGYAAVCLESGGTVDD-VIAYRRGEGFLVVVNAANREKDLAHFRRHTADLDVEISDET----EEWALLALQGPEAERLLQPFVAGDLSAL--GRYRFLETHVDGGEAIVARTGYTGEDGFEVFL--RPAEAP 211          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SYNP2 (Aminomethyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.260e-23
Identity = 70/204 (34.31%), Postives = 105/204 (51.47%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKD-DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISV 802
            L++T LHD  +A G K VPF+GW M +QYK   +E     R    +FD+SHM    L G++ +  ++KLV +++A LAPG    TV  N++GG IDD +     D   +L+VNA    KD   +  H+   TA+G  ++  +  E               Q + ++ DL+ L         I G ++ +  TG TGEDGFE+ V
Sbjct:    3 LQRTPLHDLAIAAGAKFVPFSGWEMAVQYKGLKVEHQA-VRTEVGMFDISHMGKFQLAGENLIAAMQKLVPSNLARLAPGQAQYTVLLNDHGGIIDDVIYYHQGDRQGFLIVNAATTQKDWDWLTHHL---TAQGITLT-DVSQENILLAIQGPQAEKALQPVVENLDLATLKLFNHGQGQIFGETAFIARTGYTGEDGFEVMV 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STRMK (Aminomethyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.260e-23
Identity = 75/211 (35.55%), Postives = 103/211 (48.82%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDD----LSKL-YFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            +KT L+D H A G KMV F GW MPI Y   + E  L  R++G +FDVSHM  + L+G    PFL +L+   V  L  PG    +   N  GG IDD ++  + DD   +VVNA  R+KDLA +      F      VS     + +               L ++     L+KL  F   ++   +GV   +  TG TGEDGFEI +P +
Sbjct:    3 QKTLLNDTHRALGAKMVDFGGWDMPIHYGSQLDEHHLVRRESG-VFDVSHMTVVDLRGDQVRPFLRRLLANSVDKLKVPGKALYSCMLNPRGGVIDDLIVYYLGDDFFRMVVNASTREKDLAWLREQAAPF-----GVSVEQRPDLAILAVQGPQARAIVIGLARESEREALTKLGRFAALQVQSDDGVELFVARTGYTGEDGFEILLPQD 207          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_THET81.274e-2334.13Aminomethyltransferase OS=Thermus thermophilus (st... [more]
GCST_STAHJ1.274e-2335.15Aminomethyltransferase OS=Staphylococcus haemolyti... [more]
GCST_LISMH1.274e-2332.57Aminomethyltransferase OS=Listeria monocytogenes s... [more]
GCST_FLAPJ1.274e-2334.45Aminomethyltransferase OS=Flavobacterium psychroph... [more]
GCST_FRAP22.174e-2332.03Aminomethyltransferase OS=Francisella philomiragia... [more]
GCST_COLP34.842e-2336.28Aminomethyltransferase OS=Colwellia psychrerythrae... [more]
GCST_SERP56.324e-2334.47Aminomethyltransferase OS=Serratia proteamaculans ... [more]
GCST_RUBXD6.324e-2334.27Aminomethyltransferase OS=Rubrobacter xylanophilus... [more]
GCST_SYNP28.260e-2334.31Aminomethyltransferase OS=Synechococcus sp. (strai... [more]
GCST_STRMK8.260e-2335.55Aminomethyltransferase OS=Stenotrophomonas maltoph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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