EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_YERE8 (Aminomethyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.079e-22
Identity = 70/206 (33.98%), Postives = 99/206 (48.06%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            K+T L+D HVA G +MV F GW MP+ Y   I E  +  RQ+  +FDVSHM  + L G     FL  L+  DVA L  PG    T   N +GG IDD ++  +++D+  LVVN+  R+KDL  I  H + +      V   + D+ +               L   +  +   G      I      +  TG TGE G+EI++P E
Sbjct:    3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHI-VRQDAGMFDVSHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFLREDYFRLVVNSATREKDLNWIIQHAEPY-----QVDVTVRDDLALVAVQGPTAQQKVATLLTSEQQQAIAGMKPFFGIQADDLFIATTGYTGEAGYEIALPKE 202          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STACT (Aminomethyltransferase OS=Staphylococcus carnosus (strain TM300) GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.079e-22
Identity = 72/222 (32.43%), Postives = 112/222 (50.45%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEF-RILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            + +LKKT L+D  V +  K+V F GW+MP+Q+  SI E     R+   +FDVSHM  + ++GKD   F++ ++  D   L       T   N+ GG IDD +  K+ +    LVVNA   +KD   I +H ++F  K  +VS    D+                 L   D+S++   +F + + I G + +L+ +G TGEDGFEI   S+        +L+N
Sbjct:    2 SNDLKKTPLYDRFVESNAKIVEFGGWAMPVQFS-SIKEEHNAVREVMGIFDVSHMGEVLIEGKDASDFIQYILSNDTDQLTDNKAQYTALCNDKGGIIDDLITYKLDNQKYLLVVNAANTEKDYNWINSHSENFDVKVENVS----DQYGQLAVQGPEARDYVGSLVDVDVSEMKPFDFKKDVTIFGKNIILSQSGYTGEDGFEIYCNSDDVVDIWDGLLEN 218          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PSEHT (Aminomethyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.409e-22
Identity = 75/215 (34.88%), Postives = 97/215 (45.12%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            KT L+  H+  G KMV F GW MPI Y   I E     R +  +FDVSHM  + ++G+    FL+KLV  DVA L  PG    T   NE GG IDD +I    +    LVVN+  R+KDLAH+      F      V+    +E                 L   + +    G      +      +  TG TGEDG+EI VP E A    Q +L
Sbjct:    4 KTVLYAKHLEAGAKMVDFHGWEMPINYGSQIEEHNA-VRNDAGMFDVSHMTIVDIQGEQAQAFLQKLVANDVAKLTVPGKALYTPMLNEQGGVIDDLIIYFFSNTSYRLVVNSATREKDLAHLAKISADFA-----VTVTERNEFGMIAVQGPNAKAKTATLLTAEQNAAIEGMKPFFGVQTGDLFIATTGYTGEDGYEIVVPKEQAADLWQQLL 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_THET2 (Aminomethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gcvT PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.840e-22
Identity = 69/208 (33.17%), Postives = 105/208 (50.48%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            +KKT L++ H+  G +MV FAG+ +P+QY  SI+E  L  R+   +FDVSHM    ++G++ + FL+     D   L  G    ++  NE GG +DD  + ++ ++   +VVNA    KDLAH++A  K F  +  D S    +  +             Q L   DLS     +     + G  + L  TG TGEDGFE+ +  E A
Sbjct:    1 MKKTPLYEAHLRLGARMVDFAGYLLPLQYT-SIVEEHLAVRRAVGVFDVSHMGEFLVRGEEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKDLAHLQALAKGFRVELEDAS----ERTALLALQGPKAQALLQGLVDVDLSTKRKNDVFPARVAGRPARLARTGYTGEDGFELFLAPEDA 203          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_ENTS8 (Aminomethyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gcvT PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.840e-22
Identity = 71/210 (33.81%), Postives = 100/210 (47.62%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGG 823
            ++T L++ H   G +MV F GW MP+ Y   I E     R +  +FDVSHM  + L+G     FL  L+  DVA L  PG    T   N +GG IDD ++  + +D+  LVVN+  R+KDLA I  H + +      VS  + D+ S               L  D   K   G      +      +  TG TGE G+EI++P+E A G
Sbjct:    3 QQTPLYEQHNLCGARMVDFHGWMMPLHYGSQIDEHHA-VRNDAGMFDVSHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFMTEDYFRLVVNSATREKDLAWINEHAEPY-----GVSVTVRDDLSLIAVQGPNAKAKAATLFTDAQRKATEGMKPFFGVQADDLFIATTGYTGEAGYEIAMPNEKAAG 206          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAS1 (Aminomethyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=gcvT PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.403e-22
Identity = 75/222 (33.78%), Postives = 110/222 (49.55%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEF-RILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            +  LKKT L+   V +G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + +KG D    ++ L+  D   +       T   NE GG IDD +  K++++   LVVNAG  +KD   +    K+F A+  +VS     E               Q     D+S++   EF + ++  G + +L+ +G TGEDGFEI   ++ A      ILKN
Sbjct:    2 SNELKKTPLYQTFVDSGAKIVEFGGWAMPVQFS-SIKEEHNAVRTEMGLFDVSHMGEIIIKGSDASNLVQYLLSNDTDNVTTHKAQYTALCNEQGGIIDDLITYKLEENVYLLVVNAGNTEKDFEWMYEKAKAFDAEVINVS----TEYGQLAIQGPKARDLVQQYVNIDVSEMKPFEFEQNVEFFGKNVILSQSGYTGEDGFEIYCNADDAPYLWDEILKN 218          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_THELT (Aminomethyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.139e-22
Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEI 796
            +++T L++ HV+ G KM+ FAGW MP+QY  SI +     R+N +LFDVSHM  + ++G+D V F++ L+      L  G    TV  NE GG IDD +  +  +    LVVNA   +KD   I    K F     ++S    D+               +     D+  L +  F    + G + +++ TG TGEDGFEI
Sbjct:    1 MRRTPLYESHVSLGAKMIDFAGWEMPLQYT-SINDEVATVRKNVALFDVSHMGEIFVEGEDTVEFVDYLLTNSFKNLRIGQVMYTVMCNEMGGIIDDLLTYRFGEKQAMLVVNAANIEKDFDWIVNQSKQFNVTVRNLS----DQYGLIAVQGPLSERFLKTFV-SDIDSLSYYTFASYSVFGKNCIVSRTGYTGEDGFEI 195          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROMH (Aminomethyltransferase OS=Proteus mirabilis (strain HI4320) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.139e-22
Identity = 71/208 (34.13%), Postives = 97/208 (46.63%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            K+T L+D HVA G +MV F GW MP+ Y   I E   N RQ+  +FDVSHM  + L G     FL  L+  DVA L   G    T   N +GG IDD ++    +    LVVN+  R+KDLA I  H K +      V   + D+ +             Q L  +   ++         +      +  TG TGE G+EI++P E A
Sbjct:    3 KQTPLYDEHVACGARMVDFHGWMMPLHYGSQIDEHH-NVRQDAGMFDVSHMTIVDLHGPQVKDFLRYLLANDVAKLTEKGKALYTGMLNASGGVIDDLIVYYFDETFYRLVVNSATREKDLAWITEHAKDYV-----VDIQVRDDLALIAVQGPHAQEKVQRLLSESHRQIVAAMKPFYGVQLDDLFVATTGYTGEAGYEIAMPKEQA 204          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_ALCBS (Aminomethyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.139e-22
Identity = 76/214 (35.51%), Postives = 103/214 (48.13%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGE----FRILDINGVSS----LLTXTGSTGEDGFEISVPSEPA 817
            +TAL+D H+A GGKMV F GW MPI Y   I E     RQN  +FDVSHM  + + G     +L +L+  DV  + PG    T   N+NGG IDD ++ K +D+   LVVN   R+ DL  +E H     A G  V  H   E +                 +D L+ L  G      + L +   +     ++  TG TGEDG EI +P+  A
Sbjct:    4 RTALYDAHLAAGGKMVDFGGWDMPINYGSQIEEHHA-VRQNAGVFDVSHMTVVDIAGAGARDYLRQLLANDVDRIDPGRALYTGMLNDNGGVIDDLIVYK-RDNDYRLVVNCATRETDLGWMEKH-----AGGFAVDIHERPELAMLAIQGPK--------ARDILAGLLNGSRADAVKSLKVFAFAEDGDWMIARTGYTGEDGVEIMLPNADA 202          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FRATW (Aminomethyltransferase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.099e-22
Identity = 69/220 (31.36%), Postives = 108/220 (49.09%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQH-LTKD---DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            KT L++ H+A   KMV F+GWSMPI Y   I E   N R++  +FDVSHM  + ++G +   FL  L+  DVA L           N + G +DD +  KV D+H  +VVNAG R+ D+A    + ++F     DV+     + +             +  +TK+   ++  L    F+         ++  TG TGEDGFE+ +P+        ++L+N
Sbjct:    3 KTPLYESHIAANAKMVDFSGWSMPINYGSQIQEHN-NVREDCGIFDVSHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFRIVVNAGNRESDVAWFNQNAQNF-----DVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEALLPFSFKFFS----KWMVARTGYTGEDGFEVILPATQVKKFWDSLLEN 212          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_YERE81.079e-2233.98Aminomethyltransferase OS=Yersinia enterocolitica ... [more]
GCST_STACT1.079e-2232.43Aminomethyltransferase OS=Staphylococcus carnosus ... [more]
GCST_PSEHT1.409e-2234.88Aminomethyltransferase OS=Pseudoalteromonas halopl... [more]
GCST_THET21.840e-2233.17Aminomethyltransferase OS=Thermus thermophilus (st... [more]
GCST_ENTS81.840e-2233.81Aminomethyltransferase OS=Enterobacter sakazakii (... [more]
GCST_STAS12.403e-2233.78Aminomethyltransferase OS=Staphylococcus saprophyt... [more]
GCST_THELT3.139e-2233.83Aminomethyltransferase OS=Thermotoga lettingae (st... [more]
GCST_PROMH3.139e-2234.13Aminomethyltransferase OS=Proteus mirabilis (strai... [more]
GCST_ALCBS3.139e-2235.51Aminomethyltransferase OS=Alcanivorax borkumensis ... [more]
GCST_FRATW4.099e-2231.36Aminomethyltransferase OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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