EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FRATN (Aminomethyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.099e-22
Identity = 69/220 (31.36%), Postives = 108/220 (49.09%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQH-LTKD---DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            KT L++ H+A   KMV F+GWSMPI Y   I E   N R++  +FDVSHM  + ++G +   FL  L+  DVA L           N + G +DD +  KV D+H  +VVNAG R+ D+A    + ++F     DV+     + +             +  +TK+   ++  L    F+         ++  TG TGEDGFE+ +P+        ++L+N
Sbjct:    3 KTPLYESHIAANAKMVDFSGWSMPINYGSQIQEHN-NVREDCGIFDVSHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFRIVVNAGNRESDVAWFNQNAQNF-----DVAITPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEALLPFSFKFFS----KWMVARTGYTGEDGFEVILPTTQVKKFWDSLLEN 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SYMTH (Aminomethyltransferase OS=Symbiobacterium thermophilum GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 77/236 (32.63%), Postives = 119/236 (50.42%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHL----TKDDLSKLY-FGEFRILDINGVSSL-LTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGLV 877
            E+LK+T L++ H+  G +MVPF GW MP+QY  S++E     R+   LFDVSHM    ++G   +  ++ +   D A LA G     +   ENG  +DD +I ++ +   +LVVNAG   KD   I    +    + G  +  + D  +             + L    T   LS+L  F   + + ++GV +L L+ TG TGEDGFEI V +E      +A+   L+ G+  GL+
Sbjct:    3 ESLKRTPLYELHLKLGARMVPFGGWEMPVQYS-SVIEEHRAVREAAGLFDVSHMGEFEVRGPQALDLIQLVSTNDAAKLAVGRVQYALMCYENGTVVDDILIYRLDEHRYWLVVNAGNTQKDWEWINTARE----RAGLHNLELIDRSAEIALLALQGPKAEEILQPLATGVVLSQLEPFSLAKNVTVSGVPTLVLSRTGYTGEDGFEIYVKAEDVAALWEAL---LEAGDEQGLL 230          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SHEPA (Aminomethyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 71/215 (33.02%), Postives = 99/215 (46.05%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            KT L + H+ + GKMV F GW MP+ Y   I E     RQ+  +FDVSHM  + + G D   FL KL+  DVA L  PG        + NGG IDD +   + D    +VVN+  R+KDLA I   +K F+ +  +       E +               +  D  +    G      +   S  +  TG TGE G+E+ VP++ A    QA L
Sbjct:    4 KTVLFNKHLESNGKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTEYRIVVNSATREKDLAWINEQVKGFSVEVTE-----RPELAMIAVQGPNAKAKAATVFNDAQNAAIEGMKPFFGVQAGSLFIATTGYTGETGYEVIVPNDEAEALWQAFL 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FRATO (Aminomethyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQH-LTKD---DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            KT L++ H+A   KM+ F+GWSMPI Y   I E   N R++  +FDVSHM  + ++G +   FL  L+  DVA L           N + G +DD +  KV D+H  +VVNAG R+ D+A    + ++F     DV+     + +             +  +TK+   ++  L    F+         ++  TG TGEDGFE+ +P+        ++L+N
Sbjct:    3 KTPLYESHIAANAKMIDFSGWSMPINYGSQIQEHN-NVREDCGIFDVSHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFRIVVNAGNRESDVAWFNQNAQNF-----DVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEALLPFSFKFFS----KWMVARTGYTGEDGFEVILPATQVKKFWDSLLEN 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FRATM (Aminomethyltransferase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQH-LTKD---DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            KT L++ H+A   KMV F+GWSMPI Y   I E   N R++  +FDVSHM  + ++G +   FL  L+  D+A L           N + G +DD +  KV D+H  +VVNAG R+ D+A    + ++F     DV+     + +             +  +TK+   ++  L    F+         ++  TG TGEDGFE+ +P+        ++L+N
Sbjct:    3 KTPLYESHIAANAKMVDFSGWSMPINYGSQIQEHN-NVREDCGIFDVSHMLAVDIQGSEAEKFLRYLLANDIAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFRIVVNAGNRESDVAWFNQNAQNF-----DVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEALLPFSFKFFS----KWMVARTGYTGEDGFEVILPATQVKKFWDSLLEN 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FRATH (Aminomethyltransferase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQH-LTKD---DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            KT L++ H+A   KM+ F+GWSMPI Y   I E   N R++  +FDVSHM  + ++G +   FL  L+  DVA L           N + G +DD +  KV D+H  +VVNAG R+ D+A    + ++F     DV+     + +             +  +TK+   ++  L    F+         ++  TG TGEDGFE+ +P+        ++L+N
Sbjct:    3 KTPLYESHIAANAKMIDFSGWSMPINYGSQIQEHN-NVREDCGIFDVSHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFRIVVNAGNRESDVAWFNQNAQNF-----DVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEALLPFSFKFFS----KWMVARTGYTGEDGFEVILPATQVKKFWDSLLEN 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FRATF (Aminomethyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQH-LTKD---DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            KT L++ H+A   KM+ F+GWSMPI Y   I E   N R++  +FDVSHM  + ++G +   FL  L+  DVA L           N + G +DD +  KV D+H  +VVNAG R+ D+A    + ++F     DV+     + +             +  +TK+   ++  L    F+         ++  TG TGEDGFE+ +P+        ++L+N
Sbjct:    3 KTPLYESHIAANAKMIDFSGWSMPINYGSQIQEHN-NVREDCGIFDVSHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFRIVVNAGNRESDVAWFNQNAQNF-----DVAITPQTDLAIVAVQGPKAVAVIKRVVTKEIAAEIEALLPFSFKFFS----KWMVARTGYTGEDGFEVILPATQVKKFWDSLLEN 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CHLCH (Aminomethyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 67/218 (30.73%), Postives = 101/218 (46.33%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI--LDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            +KKTAL+  H  +G K++ F G+ MP+QY   I E     R    LFDVSHM    +KG   + FL+ +   D+A +  G     +    +GG +DD +I ++  D  +L+VNA   DKD A ++ H+  F      V+   H ER               +     +     G F       NG   ++  TG TGE G E+ VP+E A    +A++
Sbjct:    1 MKKTALYPCHEQSGAKIIDFGGYLMPVQYAGIIAEHKA-VRSAAGLFDVSHMGNFFVKGSRALEFLQFVTTNDLAKVVDGQAQYNLMLYPSGGIVDDLIIYRMSADTFFLIVNASNADKDFAWLQQHIDQFEG----VTLEDHTERLSLIALQGPLALSILNRLFPSIDGEALGSFHFCSASFNGFDVIIARTGYTGEKGVEMCVPNEAAIALWEALM 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_ACIC5 (Aminomethyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=gcvT PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 69/209 (33.01%), Postives = 102/209 (48.80%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDI-NGVSSLLTXTGSTGEDGFEISVPSEPA 817
            L+KTAL+  H   G KMV F GW MP++Y   I E  +  R    LFDVSHM  + L+G   +  ++ + + D + LA G    +      G  +DD ++ K  D+   +V+NAG R+KD   I +H + F     + S    D  +               LT  DL+ +    F    + N  ++L+  TG TGEDGFEI +PS+ A
Sbjct:    9 LRKTALNAVHRRLGAKMVDFGGWDMPVEYSGLIAEH-MAVRTGVGLFDVSHMGDIQLRGPGSLDAVQHICMNDASKLAVGQAHYSAMLYPQGTFVDDVIVHKFSDNDYLIVINAGTREKDYEWIRSHAQPFHCHVSNYS----DLYTQLAIQGPRAAETLAKLTSVDLAAIKNYRFTWGTVCNLHNTLIARTGYTGEDGFEIYIPSDEA 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SHELP (Aminomethyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvT PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 73/217 (33.64%), Postives = 99/217 (45.62%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            KT L + H+    KMV F GW MP+ Y   I E  +  RQ+  +FDVSHM  + + G +   FL KL+  DVA L  PG        + N G IDD +   + D H  +VVN+  R+KDLA I   +     KG DV+     E +               +  D+ +    G      +   S  +  TG TGE G+EI VP   A    QA+L N
Sbjct:    4 KTVLFNKHLEANAKMVDFHGWDMPLNYGSQIEEHHV-VRQDAGMFDVSHMTVVDVTGAEACDFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLSDTHYRIVVNSATREKDLAWITEQV-----KGYDVTVTERPELAMIAVQGPNAKAKAAAVFTDEQNAAVEGMKPFFGVQSGSLFIATTGYTGEAGYEIIVPEAEAEALWQALLDN 214          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_FRATN4.099e-2231.36Aminomethyltransferase OS=Francisella tularensis s... [more]
GCST_SYMTH5.354e-2232.63Aminomethyltransferase OS=Symbiobacterium thermoph... [more]
GCST_SHEPA5.354e-2233.02Aminomethyltransferase OS=Shewanella pealeana (str... [more]
GCST_FRATO5.354e-2230.91Aminomethyltransferase OS=Francisella tularensis s... [more]
GCST_FRATM5.354e-2230.91Aminomethyltransferase OS=Francisella tularensis s... [more]
GCST_FRATH5.354e-2230.91Aminomethyltransferase OS=Francisella tularensis s... [more]
GCST_FRATF5.354e-2230.91Aminomethyltransferase OS=Francisella tularensis s... [more]
GCST_CHLCH5.354e-2230.73Aminomethyltransferase OS=Chlorobium chlorochromat... [more]
GCST_ACIC55.354e-2233.01Aminomethyltransferase OS=Acidobacterium capsulatu... [more]
GCST_SHELP6.992e-2233.64Aminomethyltransferase OS=Shewanella loihica (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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