EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_DEIDV (Aminomethyltransferase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.558e-21
Identity = 67/208 (32.21%), Postives = 96/208 (46.15%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            LK+T LH  H+  G +MVPF GW MP+QY     E     R++  +FDVSHM    ++G+  + FL+ +   DV+ L PG        N+ GG +DD  I  V ++   +VVNA   DKD AH++     F    G    +  D  +             Q     DL       +    + G +  L  TG TGEDGFE+ + +  A
Sbjct:    9 LKRTPLHAAHLRAGARMVPFGGWDMPVQYSGLKAEHQA-VRESAGVFDVSHMGEFRIQGEGALAFLQHVTPNDVSKLRPGRAQYNWLPNDRGGLVDDIYIYMVGENEYLMVVNASNIDKDWAHLQTLAAGF----GVTLTNESDRWALLAVQGPKAAEVLQPHVDVDLGSKKKNAYFPARLFGFNVHLARTGYTGEDGFEVFIDASEA 211          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_AERS4 (Aminomethyltransferase OS=Aeromonas salmonicida (strain A449) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.558e-21
Identity = 75/219 (34.25%), Postives = 99/219 (45.21%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKN 847
            ++ T LH  H+  G KMV F GW MPI Y  S +E     R +  +FDVSHM  + L G+    FL+ L+  DVA L  PG    +   N +GG IDD +   + D    LVVN+  R+KDLA I  H   F      VS     E +               +   + +    G      +      +  TG TGEDG+EI VP E A    QA+L N
Sbjct:    2 IQTTVLHPKHLEAGAKMVDFHGWEMPINY-GSQLEEHHAVRTDAGMFDVSHMTIVDLTGERVKAFLQHLLANDVAKLTVPGKALYSGMLNPDGGVIDDLITYYLTDTFYRLVVNSATREKDLAWIRHHAIDFA-----VSVTERPELAMIAVQGPNAKAKAAKVFTPEQNAAVEGMKPFFGVQAGDLFIATTGYTGEDGYEIVVPQEKACDLWQALLDN 214          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CHLTE (Aminomethyltransferase OS=Chlorobium tepidum GN=gcvT PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.657e-21
Identity = 67/217 (30.88%), Postives = 103/217 (47.47%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            +KKTAL  +H A G KM+ F G+ MP+QY   I E     R+   LFDVSHM    ++G   + FL+ +   D+A +  G    T+    +GG +DD +I +V  D  +L+VNA   +KD   + +H+  F  +G  +  H  +                +      + KL    F  L   G   ++  TG TGE G EI +P+E A     A+++
Sbjct:    1 MKKTALSAWHEAAGAKMIDFGGFLMPVQYTGIIAEHKA-VREAAGLFDVSHMGNFYVRGARALEFLQYMTTNDLAKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADTFFLIVNASNCEKDFDWLSSHIGQF--EGVALENHTSELSLIALQGPKSFDILARVFPGAGIDKLGSFHFIKLPFEGAEIMVARTGYTGEAGVEICLPNERAVALWSALME 214          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CHLP8 (Aminomethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=gcvT PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.657e-21
Identity = 65/216 (30.09%), Postives = 102/216 (47.22%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            +KKTAL  +H   G KM+ F G+ MP+QY   I E     R+   LFDVSHM    ++G+  + FL+ +   D+  +  G    T+    +GG +DD +I +V  D  +L+VNA   +KD A +  H+  F  +G  +     +                +   +  L KL    F  +   G  +++  TG TGE G EI +P+E A     A++
Sbjct:    1 MKKTALSAWHEGAGAKMIDFGGFLMPVQYSGIIAEHKA-VREAAGLFDVSHMGNFYVRGERALEFLQYVTTNDLGKIVDGQAQYTLMLYPDGGIVDDLIIYRVSADTFFLIVNASNCEKDFAWLSDHVGGF--EGVTLENRTSELSLIALQGPKAFEVLGRVFPEAGLDKLASFHFATVPFGGAEAMVARTGYTGEAGVEICLPNEEAEALWTALM 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CHLL2 (Aminomethyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gcvT PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 64/208 (30.77%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            +KKTAL+ +H   G K++ F G+ MP+QY   I E     R+   LFDVSHM    ++G     FL+ L   D++ ++ G     +    +GG +DD +I ++  +  +L+VNA    KD A I+ H+ +F  +G  +     +                +    +D + L    FR +  NG   L+  TG TGE G EI +P+E A
Sbjct:    1 MKKTALYSWHEQAGAKIIDFGGYLMPVQYSGIIAEHKA-VREAAGLFDVSHMGNFYVRGVRAGEFLQYLTTNDLSKVSDGEAQYNLMLYTDGGVVDDLIIYRIDAETYFLIVNASNAQKDYAWIQKHIGAF--EGVSLEDRTDELSLVALQGPMSGAILRKVFPDEDCNTLASFRFRKVYYNGTELLIARTGYTGEQGVEICLPNEAA 205          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_OCEIH (Aminomethyltransferase OS=Oceanobacillus iheyensis GN=gcvT PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 67/229 (29.26%), Postives = 116/229 (50.66%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGV--SSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGL 874
            K+T +   + ++G K + F GW +P+Q+  SI       R    LFDVSHM  +S+KG     FL+ ++  D++ L PG    T+   E+GG++DD ++ K+ D+   LVVNA   +KD   I+   K+  +    V   + ++               Q  T +++ ++ F  F+  + + G+   +L++ TG TGEDGFEI + +       + +   L++GE  GL
Sbjct:    5 KRTPIFTEYASHGAKTIDFGGWDLPVQFS-SIKHEHEVTRTKAGLFDVSHMGEISVKGPKSESFLQYVLTNDISKLEPGKAQYTIMCYEDGGTVDDLIVYKLDDEDYLLVVNAANTEKDANWIK--QKNTYSNDEIVIEDVSNQYVQLAIQGPKAVEILQKCTDENVQEIKFFRFKNNVALKGIEAKALISRTGYTGEDGFEIYIDASSGVALWKLL---LEKGEANGL 227          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LEPBP (Aminomethyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=gcvT PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 66/204 (32.35%), Postives = 97/204 (47.55%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKG--KDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGD-VSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEI 796
            LK+T LH  H   G KMVPF GW MP+QY   I++  L  R N  +FDVSHM  + + G   D + FLE +    ++ +  G        NE GG +DD  + K  D    +  NA   +    H+  ++K   +   D  +WH                   ++L K DLS + +  F  ++  G + +++ TG TGEDGFEI
Sbjct:    3 LKQTPLHSIHKEMGAKMVPFGGWDMPVQY-TGIIQEHLATRANAGIFDVSHMGEIFVTGDANDVLDFLESVTCNTISTMKEGQVQYNAVVNEVGGLVDDITVYKFNDTKYMICSNASNFEAVTQHLLKYVKGNVSIANDSKNWH-----QIALQGPKADAIFTKYLGK-DLSSILYYHFEEMNWRGETIIVSRTGYTGEDGFEI 199          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LEPBA (Aminomethyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=gcvT PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 66/204 (32.35%), Postives = 97/204 (47.55%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKG--KDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGD-VSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEI 796
            LK+T LH  H   G KMVPF GW MP+QY   I++  L  R N  +FDVSHM  + + G   D + FLE +    ++ +  G        NE GG +DD  + K  D    +  NA   +    H+  ++K   +   D  +WH                   ++L K DLS + +  F  ++  G + +++ TG TGEDGFEI
Sbjct:    3 LKQTPLHSIHKEMGAKMVPFGGWDMPVQY-TGIIQEHLATRANAGIFDVSHMGEIFVTGDANDVLDFLESVTCNTISTMKEGQVQYNAVVNEVGGLVDDITVYKFNDTKYMICSNASNFEAVTQHLLKYVKGNVSIANDSKNWH-----QIALQGPKADAIFTKYLGK-DLSSILYYHFEEMNWRGETIIVSRTGYTGEDGFEI 199          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_DECAR (Aminomethyltransferase OS=Dechloromonas aromatica (strain RCB) GN=gcvT PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 76/233 (32.62%), Postives = 101/233 (43.35%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF-------TAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVA 868
            LKKT L+  H A   +MV F GW MP+ Y   I E     R N  +FDVSHMC + + G DC  FL +LV  DVA L   G        NE GG IDD +I  + D    +VVNAG  +KDLA ++A +  +         + G  +  I   +                     L   +  E            +  TG TGEDG+EI +P+    G  +A+   L    VA
Sbjct:    2 LKKTVLNAAHRAMNARMVDFGGWDMPVNYGSQIEEHNA-VRNNCGMFDVSHMCPVDVVGADCRTFLSRLVANDVAKLKVSGKALYAAMLNEAGGVIDDLIIYFLTDTRFRIVVNAGTAEKDLAWMQAKVAEWKLDVTITQRRDGANNLGIIAVQGPNARAKVWEVLPQTKAATAGLKAFFAAEVD-------QYFIASTGYTGEDGYEIMMPA----GEAEALWNKLNAAGVA 222          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SYNPW (Aminomethyltransferase OS=Synechococcus sp. (strain WH7803) GN=gcvT PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 73/219 (33.33%), Postives = 106/219 (48.40%), Query Frame = 2
Query:  191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDH-------IYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERS---XXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS--LLTXTGSTGEDGFEISVPSE 811
            +L +T LHD  V  GG+MVPFAGW MP+Q+   + E T   RQ   LFD+SHM  L ++G +    L+ LV  D+  + PG    +V  NE+GG  DD ++  +   +       + +V+NA C   D A I    +  T +G  V+    DE+                 + L+  DL  L     R+LD+ G+S       TG TGEDG E+ +  E
Sbjct:    2 DLHRTPLHDLCVTTGGRMVPFAGWEMPVQFSGLVAEHTA-VRQRVGLFDISHMGVLRIEGSNPKDALQTLVPTDLHRIGPGQACYSVLLNESGGIRDDLIVYDLGQTNSDQGEASLIVVINAACAAADTAWIS---EQLTPQGLKVT----DEKGDGILLALQGPEALARMEQLSGVDLHALPRFAHRMLDLTGLSRPVFCARTGYTGEDGVELLLARE 212          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_DEIDV1.558e-2132.21Aminomethyltransferase OS=Deinococcus deserti (str... [more]
GCST_AERS41.558e-2134.25Aminomethyltransferase OS=Aeromonas salmonicida (s... [more]
GCST_CHLTE2.657e-2130.88Aminomethyltransferase OS=Chlorobium tepidum GN=gc... [more]
GCST_CHLP82.657e-2130.09Aminomethyltransferase OS=Chlorobaculum parvum (st... [more]
GCST_CHLL23.470e-2130.77Aminomethyltransferase OS=Chlorobium limicola (str... [more]
GCST_OCEIH4.532e-2129.26Aminomethyltransferase OS=Oceanobacillus iheyensis... [more]
GCST_LEPBP4.532e-2132.35Aminomethyltransferase OS=Leptospira biflexa serov... [more]
GCST_LEPBA4.532e-2132.35Aminomethyltransferase OS=Leptospira biflexa serov... [more]
GCST_DECAR4.532e-2132.62Aminomethyltransferase OS=Dechloromonas aromatica ... [more]
GCST_SYNPW5.919e-2133.33Aminomethyltransferase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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