EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LEPIC (Aminomethyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvT PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.722e-20
Identity = 67/209 (32.06%), Postives = 92/209 (44.02%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKG--KDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAK--GGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEI--SVP 805
            KKT L++ H   G KM+PF GW MP+QY   I E     R+   LFDVSHM  + + G  K  + FLE +    VA L+          N+NGG +DD  I K   +   +  NA   +    H+  H+     K     + WH                       K DL  + +  F +L   G   +++ TG TGEDGFEI  S+P
Sbjct:    5 KKTPLYETHRTLGAKMIPFGGWDMPVQYSGIIAEHNAT-REAAGLFDVSHMGEIFITGNPKSILLFLESITCNSVASLSDFQVQYNAILNQNGGLVDDVTIYKFSSEKYMICSNASNYEAVTEHLLEHLPISGVKVDNQSLQWH------QIALQGPKANEIFSKFLKRDLDSIQYYRFMLLPYQGEEIIVSRTGYTGEDGFEIYSSIP 206          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SHEWM (Aminomethyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=gcvT PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20
Identity = 71/216 (32.87%), Postives = 95/216 (43.98%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            KT L + H+ +  KMV F GW MP+ Y   I E     RQ+  +FDVSHM  + + G D   FL KL+  DVA L  PG        + N G IDD +   + D H  +VVN+  R+KDLA I   +K F     DV      E +               +     +    G      +   S  +  TG TGE G+EI VP   A     A+L+
Sbjct:    4 KTVLFNKHLESDAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVNGTDACAFLRKLLANDVAKLKVPGKALYGGMLDHNAGVIDDLITYYLNDTHYRIVVNSATREKDLAWIAQEVKGF-----DVVITERPELAMIAVQGPNAKAKAASVFNTAQNAAVEGMKPFFGVQADSLFIATTGYTGETGYEIIVPDSEAEALWLALLE 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SHEHH (Aminomethyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=gcvT PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20
Identity = 69/216 (31.94%), Postives = 97/216 (44.91%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            KT L + H+ + GKMV F GW MP+ Y   I E     RQ+  +FDVSHM  + + G D   FL KL+  DVA L  PG        + NGG IDD +   + D    +VVN+  R+KDLA I   +  F+ +  +       E +               +   + +    G      +   S  +  TG TGE G+E+ VP   A    QA L+
Sbjct:    4 KTVLFNKHLESNGKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTEYRIVVNSATREKDLAWINEQVNGFSVEVTE-----RPELAMIAVQGPNAKAKAATVFNAEQNAAIEGMKPFFGVQTGSLFIATTGYTGETGYEVIVPEADAEALWQAFLE 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROMM (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvT PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20
Identity = 69/218 (31.65%), Postives = 100/218 (45.87%), Query Frame = 2
Query:  191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGV------SSLLTXTGSTGEDGFEISVPSE 811
            NL+ T LHD     GG+MVPFAGW MP+Q+   + E     RQ   +FD+SHM  L L+G +    L+ LV  D+  + PG    TV  NE GG +DD VI      K     + +V+NA C   D   ++ H++       D      +                + L+ + L+ L     R +   G+      S  +  TG TGEDGFE+ + +E
Sbjct:    2 NLQHTPLHDLCRDAGGRMVPFAGWDMPVQFSGLLQEHQA-VRQQVGMFDISHMGVLRLEGTNPKDHLQALVPTDLNRIGPGEACYTVLLNETGGILDDLVIYDLGTNKQDSQSLLIVINAACSKTDTIWLKQHLQPAGIALSDAK----NNGVLLALQGPQATKVLERLSGESLASLPRFGHRQVQFYGLGAKDPSSVFVARTGYTGEDGFELLLKAE 214          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STRCO (Aminomethyltransferase OS=Streptomyces coelicolor GN=gcvT PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.938e-20
Identity = 68/231 (29.44%), Postives = 108/231 (46.75%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER---SXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGLV 877
            L++TAL   H A G  M  FAGW MP++Y  S  E  +  R    LFD+SHM  +++ G      L   ++ ++  + PG    T+   E+GG +DD ++ ++++    +V NA       ++ +  + + T +       + D+R   +               LT  DL  L +       + GV +L+  TG TGEDGFE+ V  E A G  QA+      GE AGL+
Sbjct:    6 LRRTALDATHRALGATMTDFAGWDMPLRY-GSEREEHVAVRTRAGLFDLSHMGEITVTGPQAAELLNFALVGNIGTVKPGRARYTMICREDGGILDDLIVYRLEEAEYMVVANA-------SNAQVVLDALTERAAGFDAEVRDDRDAYALLAVQGPESPGILASLTDADLDGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEHAVGLWQAL---TGAGEAAGLI 225          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_XANOR (Aminomethyltransferase OS=Xanthomonas oryzae pv. oryzae GN=gcvT PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20
Identity = 76/224 (33.93%), Postives = 99/224 (44.20%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHL-----TKDDLSKLYFGEFRILDI---NGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            +KT L+D H A G KMV F GW MPI Y  S ++     R++  +FDVSHM  + L G     FL  L+   V  L   G    T   N  GG IDD ++  + +D   LVVNA  R+KDL  I      F  +         +ERS              ++       D  +    G F  L     +G+   L  TG TGEDGFEI +P E A     A+L
Sbjct:    3 QKTILNDTHRALGAKMVDFGGWDMPIHY-GSQLDEHHQVRRDAGMFDVSHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMSEDFFRLVVNAATREKDLQWIGEQAVRFDVR--------VEERSDFAMIAVQGPNARANVIDLLDPADTAAASKLGRFAALQTRSRDGIELFLARTGYTGEDGFEIVLPQEAAVAFWNALL 217          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_XANOP (Aminomethyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=gcvT PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20
Identity = 76/224 (33.93%), Postives = 99/224 (44.20%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHL-----TKDDLSKLYFGEFRILDI---NGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            +KT L+D H A G KMV F GW MPI Y  S ++     R++  +FDVSHM  + L G     FL  L+   V  L   G    T   N  GG IDD ++  + +D   LVVNA  R+KDL  I      F  +         +ERS              ++       D  +    G F  L     +G+   L  TG TGEDGFEI +P E A     A+L
Sbjct:    3 QKTILNDTHRALGAKMVDFGGWDMPIHY-GSQLDEHHQVRRDAGMFDVSHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMSEDFFRLVVNAATREKDLQWIGEQAVRFDVR--------VEERSDFAMIAVQGPNARANVIDLLDPADTAAASKLGRFAALQTRSRDGIELFLARTGYTGEDGFEIVLPQEAAVAFWNALL 217          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_XANOM (Aminomethyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=gcvT PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20
Identity = 76/224 (33.93%), Postives = 99/224 (44.20%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHL-----TKDDLSKLYFGEFRILDI---NGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            +KT L+D H A G KMV F GW MPI Y  S ++     R++  +FDVSHM  + L G     FL  L+   V  L   G    T   N  GG IDD ++  + +D   LVVNA  R+KDL  I      F  +         +ERS              ++       D  +    G F  L     +G+   L  TG TGEDGFEI +P E A     A+L
Sbjct:    3 QKTILNDTHRALGAKMVDFGGWDMPIHY-GSQLDEHHQVRRDAGMFDVSHMTVVDLHGARVRAFLRDLLANSVDKLKVCGKALYTCMLNPQGGVIDDLIVYYMSEDFFRLVVNAATREKDLQWIGEQAVRFDVR--------VEERSDFAMIAVQGPNARANVIDLLDPADTAAASKLGRFAALQTRSRDGIELFLARTGYTGEDGFEIVLPQEAAVAFWNALL 217          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SYNS3 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9311) GN=gcvT PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20
Identity = 69/226 (30.53%), Postives = 111/226 (49.12%), Query Frame = 2
Query:  203 TALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDH--IYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERS---XXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS--LLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            T LHD  +A GG+MV FAGW MP+Q+   +M      R +  +FD+SHM  L ++G +    L++LV +D+  + PG    +V  NE GG IDD +I     + + + H  + +V+NA C + D A I  H++            + DE+                 + L+  DLS+L       L+I+G+ +      TG TGEDG E+ + ++      Q +L+
Sbjct:    6 TPLHDLCIAAGGRMVSFAGWEMPVQFS-GLMAEHKAVRSDSGMFDISHMGVLRIEGANPKDALQQLVPSDLHRIGPGQACYSVLLNEQGGIIDDLIIYDLGPSLLDESHETLLVVINAACAETDTAWIRQHLER-------ADLQVLDEKKDGVLLALQGPKAIGLLERLSGSDLSELPRFGHCSLNIHGLQAPVFTARTGYTGEDGVELLLKADDGRQLWQLLLE 223          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SHEB9 (Aminomethyltransferase OS=Shewanella baltica (strain OS195) GN=gcvT PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20
Identity = 71/215 (33.02%), Postives = 97/215 (45.12%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            KT L + H+ +  KMV F GW MP+ Y   I E     RQ+  +FDVSHM  + + G D   FL KL+  DVA L  PG        +EN G IDD +   + D +  +VVN+  R+KDLA I    + F     DV+     E +               +   + +    G          S  +  TG TGE G+EI VP + A    QA+L
Sbjct:    4 KTILFNKHLESNAKMVDFHGWDMPLNYGSQIEEHNA-VRQDAGMFDVSHMTVVDVIGNDACAFLRKLLANDVAKLKVPGKALYGGMLDENAGVIDDLITYYLTDTNYRVVVNSATREKDLAWIAKQSQGF-----DVTVTERPELAMIAVQGPNAKAKAAAVLSAEQNAAIEGMKPFFGKQAGSLFIATTGYTGEAGYEIIVPEDEAQAMWQALL 212          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_LEPIC1.722e-2032.06Aminomethyltransferase OS=Leptospira interrogans s... [more]
GCST_SHEWM2.249e-2032.87Aminomethyltransferase OS=Shewanella woodyi (strai... [more]
GCST_SHEHH2.249e-2031.94Aminomethyltransferase OS=Shewanella halifaxensis ... [more]
GCST_PROMM2.249e-2031.65Aminomethyltransferase OS=Prochlorococcus marinus ... [more]
GCST_STRCO2.938e-2029.44Aminomethyltransferase OS=Streptomyces coelicolor ... [more]
GCST_XANOR3.837e-2033.93Aminomethyltransferase OS=Xanthomonas oryzae pv. o... [more]
GCST_XANOP3.837e-2033.93Aminomethyltransferase OS=Xanthomonas oryzae pv. o... [more]
GCST_XANOM3.837e-2033.93Aminomethyltransferase OS=Xanthomonas oryzae pv. o... [more]
GCST_SYNS33.837e-2030.53Aminomethyltransferase OS=Synechococcus sp. (strai... [more]
GCST_SHEB93.837e-2033.02Aminomethyltransferase OS=Shewanella baltica (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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