EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5170 contig Csv1_Contig5170:159..1042. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_ALKMQ (Aminomethyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=gcvT PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29
Identity = 86/230 (37.39%), Postives = 127/230 (55.22%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKL-YFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGL 874
            EN KKT L   +  + GK++ F GW+MP+Q++  I E     R N  LFDVSHM  + +KGKD + F++ L+  D + +       +    ENGG +DD ++ K ++D+ YLV+NAG  +KD    E  +K  TA   +V+ +I ++ S             Q LT+ DLS+L +F   R + I+GV+ L++ TG TGEDGFEI V    A    Q   K L+ G+  GL
Sbjct:    2 ENSKKTPLFTVYEKHKGKLIDFGGWAMPVQFEGIIPEHEA-VRSNAGLFDVSHMGEVEIKGKDALNFVQYLITNDASQMEKNQIIYSFMCYENGGVVDDLLVYKFEEDYFYLVINAGNIEKD---YEWMLKQSTAYDVEVN-NISNDVSELALQGPKAEKILQKLTETDLSQLQFFYLQRDVTIDGVNCLISRTGYTGEDGFEIYVNPSDA---VQLWEKLLEVGQEDGL 223          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_THEP3 (Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvT PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.007e-28
Identity = 79/224 (35.27%), Postives = 122/224 (54.46%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE 856
            +NLKKT L D +    GK++ FAGW++P+Q++  I E     R    LFDVSHM  +++KG++   FL+ L+  D++ L       T   N NGG +DD ++ K  D+H  LVVNA   +KD   ++ +   +  +  ++S    DE S             Q LT  DLS++ F  F+  + I G+  L++ TG TGEDGFEI +P++ A    + I++  KE
Sbjct:    2 DNLKKTPLFDLYKKYNGKIIDFAGWALPVQFESIISEHEA-VRNAAGLFDVSHMGEITVKGREAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDDLLVYKYSDEHFLLVVNAANIEKDYKWMKDNKGVYEVEINNIS----DEISELAVQGPKAEEILQKLTYTDLSEIKFFYFKDNVKIAGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIIEVGKE 220          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_THENN (Aminomethyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=gcvT PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.007e-28
Identity = 79/231 (34.20%), Postives = 124/231 (53.68%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK--NLKEGEVAGLVA 880
            +K+T L++ HVA G KMV FAGW MP+ Y  SI E  +  R++  +FDVSHM  + ++G++ V F+  LV  D + +  G    TV  NE GG +DD V+ ++  +   +VVNA   +KD   I+ H K+F  +  +VS    DE +             Q +   DL  + +  F+   ++G   L++ TG TGEDGFE+ + +E A      +++     +G+ AGL A
Sbjct:    1 MKRTPLYERHVALGAKMVDFAGWIMPLYYS-SIFEEVMAVRKSVGVFDVSHMGEIVVEGQETVDFVNFLVTNDFSAIPEGKAMYTVMCNETGGIVDDLVVYRISHEKAIMVVNAANIEKDYEWIKVHAKNFNVEVRNVS----DETALVAFQGPKSQETLQRVVDIDLEGIGYYSFQWGRLDGERVLVSRTGYTGEDGFELMMNAESAAKIWDTLVEIAGNVDGKPAGLGA 226          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_THEPX (Aminomethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=gcvT PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.244e-28
Identity = 78/224 (34.82%), Postives = 123/224 (54.91%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE 856
            +NLKKT L + +    GK++ FAGW++P+Q++  I E     R    LFDVSHM  +++KG++   FL+ L+  D++ L       T   N NGG +DD ++ K  D+H YLVVNA   +KD   ++ +   +  +  ++S    DE +             Q LT  DLS++ F  F+  + I G+  L++ TG TGEDGFEI +P++ A    + I++  KE
Sbjct:    2 DNLKKTPLFELYKKYNGKIIDFAGWALPVQFESIISEHEA-VRNAAGLFDVSHMGEITVKGREAFNFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDDLLVYKYSDEHFYLVVNAANIEKDYKWMKDNKGVYEVEIENIS----DEVAELAIQGPKAEEILQKLTDTDLSEIKFFCFKDNVKIAGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIVEVGKE 220          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_THETN (Aminomethyltransferase OS=Thermoanaerobacter tengcongensis GN=gcvT PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.828e-28
Identity = 81/224 (36.16%), Postives = 122/224 (54.46%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE 856
            +NLKKT L++ +     K++ FAGW+MP+Q++  I E     R    LFDVSHM  + +KGKD  PFL+ L+  D++ L       T   N NGG IDD ++ K  +++  LVVNA   +KD   +  +   +  +  +VS    D+ +             Q LT +DLS++ F  F+  + I GV  L++ TG TGEDGFEI +P+E A    + IL+  K+
Sbjct:    8 DNLKKTPLYEIYPKYNAKIIDFAGWAMPVQFESIISEHEA-VRNAAGLFDVSHMGEIIVKGKDAFPFLQNLLTNDLSKLNDNQVLYTFMCNHNGGVIDDLLVYKYSNNYYLLVVNAANIEKDYKWMLNNAGIYKVEIENVS----DKIAELAIQGPKAEEILQKLTDEDLSQIKFFYFKDKVKIAGVECLVSRTGYTGEDGFEIYMPNEHAVTLWEKILEAGKD 226          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_NATTJ (Aminomethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=gcvT PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.828e-28
Identity = 71/206 (34.47%), Postives = 116/206 (56.31%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            +KT L+D H   GGK++ F GW +P+Q+   I++  +  R+   LFDVSHM  + ++G   + +L+K+V  DVA L PG    T    ENGG++DD +I K+ ++   L+VNA   DKD   ++ +      +G ++  ++ DE               Q LT   L ++ F  F+  +D++GV +L++ TG TGE+GFEI + +E
Sbjct:    5 QKTPLYDIHKERGGKIIDFGGWYLPVQFT-GIIDEVMTTRKEAGLFDVSHMGEIIVEGPKALEYLQKMVPNDVARLKPGKILYTPMCYENGGTVDDFLIYKMDENKFLLIVNAANTDKDFEWLQEN----NTEGVELK-NLSDEYGQIAIQGPKAEKILQRLTDTPLKEIKFFNFKEDVDLDGVKALISRTGYTGENGFEIYIKAE 204          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_GEOSW (Aminomethyltransferase OS=Geobacillus sp. (strain WCH70) GN=gcvT PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.528e-28
Identity = 83/223 (37.22%), Postives = 116/223 (52.02%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSW-HIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE 856
            LK+T L   +   G K + F GW +P+Q+  SI E     R    LFDVSHM    +KG D + FL+K++  DV+ L  G    ++   E+GG++DD +I K  D H  LVVNA   +KD   +  H+       GDV   +I  E +             Q LT  DLS + F  F+  ++INGV +L++ TG TGEDGFEI    E A    ++IL+  KE
Sbjct:    2 LKRTPLFAVYERYGAKTIDFGGWELPVQFS-SIKEEHEAVRTRAGLFDVSHMGEFVVKGDDSLAFLQKMMTNDVSKLTDGRVQYSLMCYEDGGTVDDLLIYKKADGHYLLVVNAANIEKDFEWLHGHL------FGDVELVNISQEIAQLALQGPLAEQVLQKLTNTDLSAIKFFSFQDDININGVKALVSRTGYTGEDGFEIYCRREDAVALWESILEAGKE 217          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_GEOKA (Aminomethyltransferase OS=Geobacillus kaustophilus GN=gcvT PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.241e-27
Identity = 78/218 (35.78%), Postives = 115/218 (52.75%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWH-IHDERSXXXXXXXXXXXXXQHLTKDDLSKLY-FGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            LK+T L   +   G K + F GW MP+Q+  SI E     R    LFDVSHM  + ++G+  + FL+KL+  DVA L PG    T+   E+GG++DD +I +  ++   LVVNA   +KD A +  H++      GDV    +  E +             Q LT  DL+ L  F     ++++GV +L++ TG TGEDGFE+   +E A    +AIL
Sbjct:    2 LKRTPLFSVYARCGAKTIEFGGWEMPVQFS-SIKEEHEAVRTRAGLFDVSHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYLLVVNAANTEKDFAWLSGHVE------GDVELQDVSSETAQLALQGPAAERVLQRLTDFDLAALRPFSFADGVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAIL 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACHD (Aminomethyltransferase OS=Bacillus halodurans GN=gcvT PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.241e-27
Identity = 77/211 (36.49%), Postives = 114/211 (54.03%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILD---INGVSSLLTXTGSTGEDGFEISVPSEPA 817
            LKKT L D +   GGK++ F GW++P+Q+  SI E     R    LFDVSHM  + + G   + +L++LV  DV+ +  G    T    ENGG++DD +I +  +D   LV+NA   DKD+A +E H     A  G    ++ ++ +             Q LT++ L+ + F  FR +D   I GV+ LL+ TG TGEDGFE+   +E A
Sbjct:    4 LKKTPLFDLYEQYGGKVIDFGGWALPVQFS-SIKEEHEAVRTKAGLFDVSHMGEVEVTGAQALNYLQRLVTNDVSKIKDGQAQYTAMCYENGGTVDDLLIYRRSEDQYLLVINAANIDKDIAWMEKH-----AIDGVSITNVSNQTAQLALQGPVAENVLQTLTEEPLADIKF--FRFVDGVNIAGVNVLLSRTGYTGEDGFELYCLAEDA 206          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CLOB6 (Aminomethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=gcvT PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.528e-27
Identity = 82/224 (36.61%), Postives = 113/224 (50.45%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEF-RILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE 856
            E LK T L   +   GGK+V FAG+ +P Q+K  + E     R+   LFDVSHM   ++KGKD   F++ L+  D+  L       T   NE+GG IDD ++ K  +D  +LV+NA  +DKD+  I  H   F  +  DVS    D  +             Q +   DL ++ F +  R + +NG   L++ TG TGEDGFEI    E A G   AIL   KE
Sbjct:    2 EGLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEATVKGKDAQKFVQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWILDHKGDFDVEIVDVS----DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKE 220          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_ALKMQ7.713e-2937.39Aminomethyltransferase OS=Alkaliphilus metalliredi... [more]
GCST_THEP31.007e-2835.27Aminomethyltransferase OS=Thermoanaerobacter pseud... [more]
GCST_THENN1.007e-2834.20Aminomethyltransferase OS=Thermotoga neapolitana (... [more]
GCST_THEPX2.244e-2834.82Aminomethyltransferase OS=Thermoanaerobacter sp. (... [more]
GCST_THETN3.828e-2836.16Aminomethyltransferase OS=Thermoanaerobacter tengc... [more]
GCST_NATTJ3.828e-2834.47Aminomethyltransferase OS=Natranaerobius thermophi... [more]
GCST_GEOSW8.528e-2837.22Aminomethyltransferase OS=Geobacillus sp. (strain ... [more]
GCST_GEOKA3.241e-2735.78Aminomethyltransferase OS=Geobacillus kaustophilus... [more]
GCST_BACHD3.241e-2736.49Aminomethyltransferase OS=Bacillus halodurans GN=g... [more]
GCST_CLOB65.528e-2736.61Aminomethyltransferase OS=Clostridium botulinum (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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