EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SALG2 (Aminomethyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=gcvT PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            ++T L++ H   G +MV F GW MP+ Y   + E     R +  +FDVSHM  + L G     FL  L+  DVA L   G    +   N +GG IDD +I    +D   LVVN+  R+KDL+ I  H + +      +   + D+ S               L  D+      G      +      +  TG TGE G+EI++P+E A    +A+++
Sbjct:    3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIIYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVEGMKPFFGVQVGDLFIATTGYTGEAGYEIAMPNEKAADFWRALVE 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SALEP (Aminomethyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=gcvT PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            ++T L++ H   G +MV F GW MP+ Y   + E     R +  +FDVSHM  + L G     FL  L+  DVA L   G    +   N +GG IDD +I    +D   LVVN+  R+KDL+ I  H + +      +   + D+ S               L  D+      G      +      +  TG TGE G+EI++P+E A    +A+++
Sbjct:    3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIIYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLIAVQGPNAQEKAATLFTDEQRHAVEGMKPFFGVQVGDLFIATTGYTGEAGYEIAMPNEKAADFWRALVE 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SALA4 (Aminomethyltransferase OS=Salmonella agona (strain SL483) GN=gcvT PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 64/217 (29.49%), Postives = 98/217 (45.16%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            ++T L++ H   G +MV F GW MP+ Y   + E     R +  +FDVSHM  + L G     FL  L+  DVA L   G    +   N +GG IDD ++    +D   LVVN+  R+KDL+ I  H + +      +   + D+ S               L  D       G      +      +  TG TGE G+EI++P+E A    +A+++
Sbjct:    3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLIAVQGPNAQEKAATLFTDQQRHAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEKAADFWRALVE 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PYRKO (Probable aminomethyltransferase OS=Pyrococcus kodakaraensis GN=gcvT PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 60/205 (29.27%), Postives = 107/205 (52.20%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKD----DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEI 796
            +K+  + D+H  +  K+  FAGW MPI Y  SI E  L  R    +FDVSHM     +GKD + FL+ +   D++     +GT T+  NE G   D++++  + +D   +V ++   +K  A   A +K    K GD+   I + ++             + L K+    D++ L++ + + ++++G+  LL+ +G TGE+GFE+
Sbjct:    2 VKRVHIFDWHKEHAKKVEEFAGWEMPIWYS-SIKEEHLAVRNGVGIFDVSHMGEFIFRGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNMGNDTYMMVCDSDAFEKLDAWFNA-IKRGIEKFGDIDLEI-ENKTYDMAMFSIQGPKARDLAKELFGIDINDLWWFQAKEVELDGIKMLLSRSGYTGENGFEV 203          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_MYCUA (Aminomethyltransferase OS=Mycobacterium ulcerans (strain Agy99) GN=gcvT PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 73/236 (30.93%), Postives = 102/236 (43.22%), Query Frame = 2
Query:  179 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE--GEVAGLVA 880
            SDA  L +  L D H A G     F GW MP+ Y  ++ E     R    LFDVSH+    ++G     F+   +  D+  + PG    T+  NE+GG IDD +   V DD I+LV NA      +A ++A      A  G     +H  RS                     +++ +  +     NGVS  +  TG TGE G+E+  P E AG    A+   + E  G  AGL A
Sbjct:    2 SDAPELMQGPLEDRHRALGASFAEFGGWLMPVSYTGTVSEHNAT-RNAAGLFDVSHLGKALVRGPGAAEFVNSALTNDLRRIGPGKAQYTLCCNESGGVIDDLIAYYVADDEIFLVPNAANTAAVVAALQA-----AAPSGLTITDLH--RSYAVLAVQGPRSTEVLAALGLPTEMDYMGYADSSYNGVSVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVAEVGGSPAGLGA 229          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_THEGJ (Probable aminomethyltransferase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gcvT PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18
Identity = 68/242 (28.10%), Postives = 120/242 (49.59%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKD----DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPS--------EPAGGPXQAI---LKNLKEGEVAGL 874
            +K+  + D+H  +  K+  FAGW MPI Y  SI E  L  R    +FDVSHM     +GKD + FL+ +   D++     +GT T+  NE G   D++++  + +D   +V ++   +K  A   A +K    K G +   I + ++             + L KD    D++ L++ + + ++++G+  LL+ +G TGE+G+E+            E  G P +A+    + L+EGE  G+
Sbjct:    2 VKRVHIFDWHKEHAKKVEEFAGWEMPIWYS-SIKEEHLAVRNGVGIFDVSHMGEFIFRGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNLGNDTYMMVCDSDAFEKLEAWFNA-IKRGIEKFGSIDLEI-ENKTYDMAMFSVQGPKARDLAKDLFGIDINDLWWFQAKEVELDGIKMLLSRSGYTGENGWEVYFEDKNPYHPNPEKRGRPEKALHVWERILEEGEKYGI 240          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_TERTT (Aminomethyltransferase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvT PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18
Identity = 71/215 (33.02%), Postives = 100/215 (46.51%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS------LLTXTGSTGEDGFEISVPSEPA 817
            LK+T L D H   GGK+V F GW+MP+ Y   I E     R    +FDVSHM  + ++G     FL  L+  DV  L  PG    T   NE+GG IDD ++  + + +  LVVN   R+KDLA I +  +++     DV+     E +               L    +      E +I     +S        +  TG TGEDG+EI +P+E A
Sbjct:    2 LKQTPLFDLHRDMGGKLVDFGGWNMPVNYGSQIEEHHA-VRNGAGMFDVSHMTVVDIQGTGARDFLRYLLANDVDRLKLPGKALYTGMLNESGGVIDDLIVYLMVNGY-RLVVNCATREKDLAWINSQAEAY-----DVTVIERPELAMIAVQGPLARGKVHDL----IGAAVLEELKIFQGVPLSGEGYADWFVARTGYTGEDGYEIILPAEAA 205          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SACEN (Aminomethyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=gcvT PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18
Identity = 61/215 (28.37%), Postives = 96/215 (44.65%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKL-YFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAI 838
            ++T LH+ H A G     FAGW MP++Y     E     R    LFD++HM  + + G      L+  ++A+ + +  G    T+  N  GG +DD ++ ++ +    +V NA       A +   +  F A   DVS    D+ +               LT  DLS + Y+  +R  ++ G   +L  TG TGEDGFE+      A    QA+
Sbjct:    5 RQTPLHEIHEALGATFTEFAGWRMPLRYTGDAAEHNA-VRTAAGLFDLTHMGEIRISGPQAPEALDYALVANASAITVGRARYTMICNSEGGVLDDLIVYRLGEQEYLVVANAANAAVVSAELAERVARFEASHEDVS----DDYALIAVQGPKAVDILAPLTSTDLSTVKYYAGYR-SEVAGARVMLARTGYTGEDGFELFTSPADAPAVWQAL 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SALPB (Aminomethyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.126e-18
Identity = 63/217 (29.03%), Postives = 98/217 (45.16%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            ++T L++ H   G +MV F GW MP+ Y   + E     R +  +FDVSHM  + L G     FL  L+  DVA L   G    +   N +GG IDD ++    +D   LVVN+  R+KDL+ I  H + +      +   + D+ S               L  +       G      +      +  TG TGE G+EI++P+E A    +A+++
Sbjct:    3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLIAVQGPNAQEKAATLFTEQQRHAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEKAADFWRALVE 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PYRHO (Probable aminomethyltransferase OS=Pyrococcus horikoshii GN=gcvT PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.126e-18
Identity = 64/245 (26.12%), Postives = 123/245 (50.20%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA---HIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKD----DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISV-------PSEPAGGPXQAIL----KNLKEGEVAGL 874
            +K+  + D+H  +  K+  FAGW MPI Y  SI E  L  R    +FDVSHM  +  +GKD + FL+ +   D++     +GT T+  NE G   D++++  + ++   ++ ++   +K  A   +++  ++ FT    ++    +D                + L KD    D++++++ + R ++++G+  LL+ +G TGE+GFE+ +       P E   G  +  L    + L+EG+  G+
Sbjct:    2 VKRVHIFDWHKEHARKIEEFAGWEMPIWYS-SIKEEHLAVRNAVGIFDVSHMGEIVFRGKDALKFLQYVTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYLMICDSDAFEKLYAWFTYLKRTIEQFTKLDLEIELKTYD-----IAMFAVQGPKARDLAKDLFGIDINEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGEPEKALHVWERILEEGKKYGI 240          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_SALG22.105e-1829.95Aminomethyltransferase OS=Salmonella gallinarum (s... [more]
GCST_SALEP2.105e-1829.95Aminomethyltransferase OS=Salmonella enteritidis P... [more]
GCST_SALA42.105e-1829.49Aminomethyltransferase OS=Salmonella agona (strain... [more]
GCST_PYRKO2.105e-1829.27Probable aminomethyltransferase OS=Pyrococcus koda... [more]
GCST_MYCUA2.105e-1830.93Aminomethyltransferase OS=Mycobacterium ulcerans (... [more]
GCST_THEGJ3.591e-1828.10Probable aminomethyltransferase OS=Thermococcus ga... [more]
GCST_TERTT3.591e-1833.02Aminomethyltransferase OS=Teredinibacter turnerae ... [more]
GCST_SACEN3.591e-1828.37Aminomethyltransferase OS=Saccharopolyspora erythr... [more]
GCST_SALPB6.126e-1829.03Aminomethyltransferase OS=Salmonella paratyphi B (... [more]
GCST_PYRHO6.126e-1826.12Probable aminomethyltransferase OS=Pyrococcus hori... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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