EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PYRFU (Probable aminomethyltransferase OS=Pyrococcus furiosus GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.126e-18
Identity = 65/240 (27.08%), Postives = 120/240 (50.00%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA---HIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISV--------PSEPAGGPXQAI---LKNLKEGEVAGL 874
            K+  L D+H  +  K+  FAGW MPI Y  SI E  L  R    +FDVSHM  +  KGKD + FL+     D++     +GT T+  NE G   D++++  + ++   ++ +A   +K  A   +++  ++ FT    ++    +D  +               L   D++++++ + R ++++G+  LL+ +G TGE+GFE+ +          E  G P +A+    + L+EG+  G+
Sbjct:    3 KRVHLFDWHKEHAKKIEEFAGWEMPIWYS-SIKEEHLAVRNAVGVFDVSHMGEILFKGKDALKFLQYTTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYLMICDADAFEKLYAWFTYLKKTIEQFTKLDLEIELKTYD-IAMFAVQGPKARDLAMDLFGIDINEMWWFQGRWVELDGIKMLLSRSGYTGENGFEVYIEDLNPYHPDEEKRGKPEKALHVWERILEEGQKYGI 240          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PELPB (Aminomethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.126e-18
Identity = 62/226 (27.43%), Postives = 99/226 (43.81%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDI--NGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEV 865
            +KKTAL+ +H   G K++ F G+ MP+QY+  I E     R    LFDVSHM    ++G     FL+ +   D+     G     +    +GG +DD +I ++  +  +L+VNA    KD   ++ H+ +F      V    H ++                     L     G FR   +   G   ++  TG TGE G EI +P+  A    +A+ +  KE  +
Sbjct:    1 MKKTALYSWHEEAGAKIIDFGGYLMPVQYRGIIAEHHA-VRSAAGLFDVSHMGNFYVRGARAKEFLQYMTTNDLDNAEDGQAQYNLMLYPHGGIVDDLIIYRIDSETFFLIVNASNAQKDFEWLQQHIAAFEG----VVLEDHTDQLSLIALQGPLALNILATVFPALDVPALGAFRFCKVLFQGTEVMIAGTGYTGEKGVEICLPNAMALPLWEALFEAGKESGI 221          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PARD8 (Aminomethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.126e-18
Identity = 62/202 (30.69%), Postives = 97/202 (48.02%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS-LLTXTGSTGEDGFEI 796
            +K T   D H+A G KM  FAG++MPI+Y   I++  +       +FDVSHM    +KG + + F++ +   D + L  G    T F N+ GG +DD ++   + +   LVVNAG  DKD     +H       G ++  +  D  +             Q LT  DLS + +  F   +  G  + +++ TG TG  GFE+
Sbjct:    1 MKTTPFTDVHIALGAKMHEFAGFNMPIEYS-GIIDEHMTVVNGVGVFDVSHMGEFWVKGPNALAFIQSVTSNDASVLPLGKAQYTCFPNDKGGIVDDLLVYHYEPEKYLLVVNAGNIDKDWEWCVSH----NTVGAELE-NSSDRTAQLAIQGPKAQEVLQRLTPVDLSSIPYYSFVTGEFAGCKNVIISNTGYTGAGGFEL 196          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACV8 (Aminomethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.126e-18
Identity = 67/218 (30.73%), Postives = 103/218 (47.25%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS-LLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            +K T   + H+A G KM  FAG++MPI+Y   I E    C   G +FDVSHM    +KG + + FL+++   +VA L  G    T F NE GG +DD ++   + +   LVVNA   +KD     +H       G ++  +  D  +             Q LT  +LS++ +  F   +  G    +++ TG TG  GFE+    E      +AI +
Sbjct:    1 MKTTPFTETHIALGAKMHEFAGYNMPIEYSGIIDEHLTVCNAVG-VFDVSHMGEFWVKGPNALEFLQQVTSNNVATLPVGKAQYTCFPNEEGGIVDDLLVYHYESEKYLLVVNAANIEKDWNWCVSH----NTVGAELE-NASDRMAQLAIQGPKAMEVLQKLTPVNLSEIPYYAFTTGEFAGQKDVIISNTGYTGAGGFELYFYPEAGQAIWKAIFE 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SYNP6 (Aminomethyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.000e-18
Identity = 60/213 (28.17%), Postives = 98/213 (46.01%), Query Frame = 2
Query:  191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI--TKVKD--DHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            +L  + LH    + G +   FAGW +P+Q++  +M+  L  R+   LFD+SHM    L+G      L++L+ +D+  L PG    +V  NE GG +DD ++    + D  +  +L+VNA   D D   +  H+    A        +  + +             Q L   DL++L      +  I G  + +  TG TGEDG E+ +P   A
Sbjct:    8 SLLSSPLHSVCTSAGARFTGFAGWELPLQFQ-GLMQEHLAVRERAGLFDISHMGKFQLRGSGLRAALQRLLPSDLTTLLPGQAQYSVLLNEAGGCLDDLIVYWQGIVDGVEQAFLIVNAATTDSDRLWLTEHLPPAIA-----LLDLSQDLALVAIQGPQAIAFLQPLVSCDLAELPRFSHTVTSIAGQPAFVARTGYTGEDGCEVMLPPAAA 214          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SYNE7 (Aminomethyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.000e-18
Identity = 60/213 (28.17%), Postives = 98/213 (46.01%), Query Frame = 2
Query:  191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI--TKVKD--DHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            +L  + LH    + G +   FAGW +P+Q++  +M+  L  R+   LFD+SHM    L+G      L++L+ +D+  L PG    +V  NE GG +DD ++    + D  +  +L+VNA   D D   +  H+    A        +  + +             Q L   DL++L      +  I G  + +  TG TGEDG E+ +P   A
Sbjct:    8 SLLSSPLHSVCTSAGARFTGFAGWELPLQFQ-GLMQEHLAVRERAGLFDISHMGKFQLRGSGLRAALQRLLPSDLTTLLPGQAQYSVLLNEAGGCLDDLIVYWQGIVDGVEQAFLIVNAATTDSDRLWLTEHLPPAIA-----LLDLSQDLALVAIQGPQAIAFLQPLVSCDLAELPRFSHTVTSIAGQPAFVARTGYTGEDGCEVMLPPAAA 214          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CHRVO (Aminomethyltransferase OS=Chromobacterium violaceum GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.000e-18
Identity = 66/208 (31.73%), Postives = 97/208 (46.63%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            K+T L D H+A G KMV FAGW MPI Y   + E  +  R +  +FDVSHM  + + G D   +L+KL+  DVA L   G    +      G  +DD ++      +  +VVNAG  +KDLA +E+    F     DV+  +  + +               + K +L++          +         TG TGEDG EI VP++ A
Sbjct:    5 KRTPLFDAHIAAGAKMVDFAGWEMPIHYGSQLKEHEI-VRSDAGMFDVSHMTVIDITGADAKAWLQKLIANDVAKLGFEGKALYSGMLTPEGTVVDDLIVYLTAYGY-RMVVNAGTTEKDLAWMESQKAGF-----DVALKVRRDLAMLAVQGPKAIQKVCSI-KPELAEAIRALKVFQGLPQGEWFYARTGYTGEDGLEIMVPADQA 204          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROMT (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.365e-17
Identity = 71/221 (32.13%), Postives = 102/221 (46.15%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHM--KSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKL-YFGEFRILD----INGVSSL-LTXTGSTGEDGFEISVPSEPA 817
            L +T L+      GGKMVPFA W MP+ +   I E     R+N  +FD+SHM  + LKGK+    L+ LV +DV  + P     TVF  ENGG  DD +I         ++ I LV+NA  ++ D+  + +++  K  T            E +             + + ++ LS L  FG   I      IN   S+ +  TG TGE+GFE     E A
Sbjct:    3 LLQTPLYQECKELGGKMVPFANWEMPVSFSGLIEEHNA-VRKNVGMFDISHMGVVQLKGKNIKSALQNLVPSDVFRIGPSEACYTVFLKENGGIQDDLIIYDQGVLDTNEESIVLVINAARKESDIEWLSSNLFKKEITIS------EFMPEGALIAIQGPESISTLEKILEEPLSNLPRFGHRTITSNPNLINSQESIFIARTGYTGEEGFEFLSSPETA 216          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PORGI (Aminomethyltransferase OS=Porphyromonas gingivalis GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.365e-17
Identity = 61/202 (30.20%), Postives = 98/202 (48.51%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS-LLTXTGSTGEDGFEI 796
            +K T   D H+A G KM  FAG++MPI+Y   I++  +N   N  +FDVSHM    +KG + + FL+K+   D + LA G      F N +GG +DD ++ + +++   +V NA    KD A             G +  +  D  +             Q LT  DL+++ +  F++    G    +++ TG TG  GFE+
Sbjct:    1 MKTTPFTDVHIALGAKMHEFAGYNMPIEY-GGIIDEHMNVVNNVGVFDVSHMGEFWVKGPNALRFLQKVSSNDASKLAVGQVQYCCFPNNDGGIVDDFLLYRYEEEKYMMVPNAANIAKDWAWCRQQNTM-----GAILENASDNIAQLAVQGPKATEVMQRLTDIDLNEITYYTFKVGSFAGCPDVIISATGYTGAGGFEL 196          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PORG3 (Aminomethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.365e-17
Identity = 61/202 (30.20%), Postives = 98/202 (48.51%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS-LLTXTGSTGEDGFEI 796
            +K T   D H+A G KM  FAG++MPI+Y   I++  +N   N  +FDVSHM    +KG + + FL+K+   D + LA G      F N +GG +DD ++ + +++   +V NA    KD A             G +  +  D  +             Q LT  DL+++ +  F++    G    +++ TG TG  GFE+
Sbjct:    1 MKTTPFTDVHIALGAKMHEFAGYNMPIEY-GGIIDEHMNVVNNVGVFDVSHMGEFWVKGPNALRFLQKVSSNDASKLAVGQVQYCCFPNNDGGIVDDFLLYRYEEEKYMMVPNAANIAKDWAWCRQQNTM-----GAILENASDNIAQLAVQGPKATEVMQRLTDIDLNEITYYTFKVGSFAGCPDVIISATGYTGAGGFEL 196          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_PYRFU6.126e-1827.08Probable aminomethyltransferase OS=Pyrococcus furi... [more]
GCST_PELPB6.126e-1827.43Aminomethyltransferase OS=Pelodictyon phaeoclathra... [more]
GCST_PARD86.126e-1830.69Aminomethyltransferase OS=Parabacteroides distason... [more]
GCST_BACV86.126e-1830.73Aminomethyltransferase OS=Bacteroides vulgatus (st... [more]
GCST_SYNP68.000e-1828.17Aminomethyltransferase OS=Synechococcus sp. (strai... [more]
GCST_SYNE78.000e-1828.17Aminomethyltransferase OS=Synechococcus elongatus ... [more]
GCST_CHRVO8.000e-1831.73Aminomethyltransferase OS=Chromobacterium violaceu... [more]
GCST_PROMT1.365e-1732.13Aminomethyltransferase OS=Prochlorococcus marinus ... [more]
GCST_PORGI1.365e-1730.20Aminomethyltransferase OS=Porphyromonas gingivalis... [more]
GCST_PORG31.365e-1730.20Aminomethyltransferase OS=Porphyromonas gingivalis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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