EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_RALPJ (Aminomethyltransferase OS=Ralstonia pickettii (strain 12J) GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 73/234 (31.20%), Postives = 100/234 (42.74%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERS----------------XXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            L+ T L+  H + G +MV F GW MP+ Y   I E     RQ+  +FDVSHMC + L G     FL  L+  +V  L  PG    +   N  GG IDD ++   ++D   LVVNAG    DL  I A      A G DV+  I   RS                                  D L     G   + ++  +  ++  TG TGEDGFE+ VP+    G  + +L+
Sbjct:    3 LQHTPLNAIHRSLGARMVDFGGWDMPVNYGSQIEEHHA-VRQDAGVFDVSHMCVVDLTGARVRDFLRGLLANNVDKLQTPGKALYSCMLNPKGGVIDDLIVYFFREDWFRLVVNAGTAPTDLEWIVAQN---AAAGTDVT--ITPRRSDNNAGAEPLGILAVQGPNARAKTYAALPGSQAVGDALKPFNAGFVTVENVGEI--MVARTGYTGEDGFELVVPAAQIAGVWERLLQ 228          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_NATPD (Probable aminomethyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 60/204 (29.41%), Postives = 95/204 (46.57%), Query Frame = 2
Query:  191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILD--INGVSSLLTXTGSTGEDGFEI 796
            +L+   L D H   G K+  F GW MP+++ DSI       R++   FD+SHM  + + G D      +L   DVA LAPG  T    T+++G  +DD+V+ ++ D   YL V     D+ +A      +SF A   D++  + +                + L+  D+       F   +  + GV  L++ TG TGEDG E+
Sbjct:    2 SLRTPPLFDAHTDAGAKLTEFGGWEMPVEF-DSIRTEHDAVRESAGKFDISHMGEIEVSGPDAAALTNRLTTNDVASLAPGEATYAGITDDDGVLLDDTVVYRLPDGATYLFVPNAGNDELMAE---RWRSF-ADRWDLAATVDNATDDYAMVALQGPDALELLSSLDVDVFDLSRFEAAERTVAGVDCLVSRTGYTGEDGVEL 200          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_KLEP7 (Aminomethyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 65/216 (30.09%), Postives = 98/216 (45.37%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            ++T L++ H   G +MV F GW MP+ Y   I E     R +  +FDVSHM  +   G     FL  L+  DVA L  PG    T     + G IDD ++  + +D+  LVVN+  R+KDLA I    + +   G +++  + D+ S               L  D   +   G      +      +  TG TGE G+EI +P+E A    + +L
Sbjct:    3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRGDAGMFDVSHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYFRLVVNSATREKDLAWISEQAEPY---GLEIT--VRDDLSLIAVQGPQAKAKAATLFTDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIVMPNEQAADFWRGLL 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SACD2 (Aminomethyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvT PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 65/219 (29.68%), Postives = 103/219 (47.03%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSK--LYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            L +T L   H   GGKMV F GW MP+ Y   + E     R +  +FDVSHM  + + G     FL+ ++  DVA L   G    +   N  GG +DD ++  ++  +  +VVN   R+KDLA +  H     AKG +V+ +  D+ +               +  + L+     F    +  +  V+  +  TG TGEDG+EI +P+  A    +A++
Sbjct:    2 LNETVLAPLHREIGGKMVDFGGWDMPLHYGSQVEEHQ-KVRTDAGMFDVSHMTVVDVTGAGAKTFLQYVLANDVAKLTKNGKALYSGMLNHEGGVVDDLIVYLMEWGY-RVVVNCATREKDLAWMVEH-----AKGFEVALNERDDLAMIAVQGPAAREKTAQILPELLTMDLDIFQGADVAALGDVTFFVARTGYTGEDGYEIMLPTSDADAFWRALM 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_RALSO (Aminomethyltransferase OS=Ralstonia solanacearum GN=gcvT PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 69/230 (30.00%), Postives = 100/230 (43.48%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTK-----------DDLSKLYFGEFRILDINGVSSLL-TXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            L+ T L+  H + G +MV F GW MP+ Y   I E     R++  +FDVSHMC + L G     FL  L+  ++  L  PG    T   N  GG IDD ++   ++D   LVVNAG    D+  I A   +    G  ++    D  +                 K            +  K +   F  +D  GV  ++   TG TGEDGFE+ VP+    G  + +L+
Sbjct:    3 LQHTPLNAIHRSLGARMVDFGGWDMPVNYGSQIEEHHA-VRRDAGIFDVSHMCVVDLTGARVRDFLRGLLANNIDKLQTPGKALYTCMLNPKGGVIDDLIVYFFREDWFRLVVNAGTAPTDIEWITA-QNAAAGTGVAITPRRSDNNAGAEPLGIVAVQGPNARAKAYAALPGTQAVGEALKPFNAGFATID--GVGEIMVARTGYTGEDGFELVVPAAQIAGVWERLLQ 228          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PYRAB (Probable aminomethyltransferase OS=Pyrococcus abyssi GN=gcvT PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 64/240 (26.67%), Postives = 120/240 (50.00%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA---HIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISV-------PSEPAGGPXQAIL----KNLKEGEVAGL 874
            K+  L D+H  +  K+  FAGW MPI Y  SI E  L  R    LFDVSHM  +  +GKD + FL+ +   D++     +G  T+  NE G   D+++I  + ++   ++ ++   +K  A   +++  ++ FT    ++    +D  +             + L   D++++++ + R ++++G+  LL+ +G TGE+GFE+ +       P E   G  +  L    + L+EG+  G+
Sbjct:    3 KRVHLFDWHKEHAKKIEEFAGWEMPIWYS-SIKEEHLAVRNAVGLFDVSHMGEIYFRGKDALKFLQYVTTNDISKPPAISGIYTLVLNERGAIKDETLIFNMGNNEYLMICDSDAFEKLYAWFTYLKKTIEQFTKLDLEIELKTYD-IAMFAVQGPKARDLARDLFGIDINEMWWFQARWVELDGIKMLLSRSGYTGENGFEVYIEDANPYHPDESKRGEPEKALHVWERILEEGKKYGI 240          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PSEAE (Aminomethyltransferase OS=Pseudomonas aeruginosa GN=gcvT PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 67/213 (31.46%), Postives = 100/213 (46.95%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIY-LVVNAGCRDKDLAHIEAHMKSFTA---KGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGG 823
            +T L++ HVA G KMV F GW MP+ Y   + E     R++  +FDVSHM  + + G+    +L+ L+  DVA L   G    +   NE GG +DD ++     +H Y +VVNA  RDKD+A ++A    F     + GD++       +               L ++   K + G             +  TG TGEDG EI +P+  A G
Sbjct:    4 RTPLYELHVALGAKMVDFGGWDMPLHYGSQVEEHH-QVRRDCGVFDVSHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVYLT--EHGYRVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVSPARAALIRE--LKPFQGRAE------GDWFIARTGYTGEDGLEIMLPAAEAPG 205          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROM1 (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL1A) GN=gcvT PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 69/219 (31.51%), Postives = 102/219 (46.58%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKL-YFGEFRILD----INGVSSL-LTXTGSTGEDGFEISVPSEPA 817
            L +T L+      GGKMVPFA W MP+ +   I E     R+N  +FD+SHM  + LKGK+    L+ LV +DV  + P     TVF  ENGG  DD +I         ++ + LV+NA  ++ D+  + +++    +K          E +             + + ++ LS L  FG   I      IN   S+ +  TG TGE+GFE     E A
Sbjct:    3 LLQTPLYQECKELGGKMVPFANWEMPVSFSGLIEEHNA-VRKNVGMFDISHMGVVQLKGKNIKSALQNLVPSDVFRIGPSEACYTVFLKENGGIQDDLIIYDQGVLDTNEESVVLVINAARKESDVEWLSSNL----SKKEITISEFMPEGALIAIQGPESISTLEKILEEPLSNLPRFGHRTITSNPNLINSQESIFIARTGYTGEEGFEFLSSPETA 216          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STRAW (Aminomethyltransferase OS=Streptomyces avermitilis GN=gcvT PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.040e-17
Identity = 64/230 (27.83%), Postives = 105/230 (45.65%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER---SXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGLV 877
            + TAL   H + G  M  FAGW MP++Y  S  +  L  R    LFD+SHM  +++ G      L   ++ ++A +  G    T+    +GG +DD ++ ++++    +V NA       ++ +  + + T + G     + D+R   +             + LT  DL  L +       + GV +L+  TG TGEDGFE+ V    A    QA+    + G  AGLV
Sbjct:    7 RHTALDALHRSLGATMTDFAGWDMPLRY-GSERDEHLAVRSKAGLFDLSHMGEITVTGPGAAALLNYALVGNIASVGVGRARYTMICRADGGILDDLIVYRLQEQTYLVVANA-------SNAQVVLDALTERAGGFDAVVRDDRDAYALIAVQGPESPGILKSLTDADLDGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVDPADAEKLWQAL---TEAGAPAGLV 225          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PSESM (Aminomethyltransferase OS=Pseudomonas syringae pv. tomato GN=gcvT PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.040e-17
Identity = 63/208 (30.29%), Postives = 96/208 (46.15%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            ++T L D H+A G KMV F GW MP+ Y   + E     R++  +FDVSHM  + + G++   +L +L+  DV  L  PG    +   +E  G IDD ++    D +  LVVNA    KDLA +++ +  F     DV      E +               L     ++L         ++     +  TG TGEDG EI +P++ A
Sbjct:    3 QRTPLFDLHLALGAKMVDFGGWDMPLHYGSQVEEHH-QVRRDCGVFDVSHMNVIDVLGREAKAWLRRLLANDVDKLKTPGRALYSAMLDEQAGVIDDMIVYLTADGY-RLVVNAATGAKDLAWMQSQLGDF-----DVQLLARSEMAMLAIQGPQARNRIAQLVSSARAELIRQLKPFEGLDDGDWFIARTGYTGEDGLEIMLPADEA 203          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_RALPJ1.782e-1731.20Aminomethyltransferase OS=Ralstonia pickettii (str... [more]
GCST_NATPD1.782e-1729.41Probable aminomethyltransferase OS=Natronomonas ph... [more]
GCST_KLEP71.782e-1730.09Aminomethyltransferase OS=Klebsiella pneumoniae su... [more]
GCST_SACD22.328e-1729.68Aminomethyltransferase OS=Saccharophagus degradans... [more]
GCST_RALSO2.328e-1730.00Aminomethyltransferase OS=Ralstonia solanacearum G... [more]
GCST_PYRAB2.328e-1726.67Probable aminomethyltransferase OS=Pyrococcus abys... [more]
GCST_PSEAE2.328e-1731.46Aminomethyltransferase OS=Pseudomonas aeruginosa G... [more]
GCST_PROM12.328e-1731.51Aminomethyltransferase OS=Prochlorococcus marinus ... [more]
GCST_STRAW3.040e-1727.83Aminomethyltransferase OS=Streptomyces avermitilis... [more]
GCST_PSESM3.040e-1730.29Aminomethyltransferase OS=Pseudomonas syringae pv.... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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