EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACSK (Aminomethyltransferase OS=Bacillus clausii (strain KSM-K16) GN=gcvT PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.040e-17
Identity = 68/229 (29.69%), Postives = 106/229 (46.29%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGLV 877
            L +T L++ +   G K V F GW +P+ +   I +     R    LFDVSHM  L ++G D +  L+ LV  D++ L            E+GG++DD ++ +  ++   LV+NA     D+  I AH+      G      I +E +             Q LT + LS++    F+  +    +  L + TG TGEDGFE+ V +  A    +AI   L  GE  GL+
Sbjct:    5 LLRTPLYELYDQAGAKTVDFGGWELPVSFS-GIKKEHHAVRNAAGLFDVSHMGELLVEGPDALNNLQALVTNDLSKLQDNQAQYNAMCTESGGTVDDLIVYRRNENAYLLVLNAANIQSDIEWIRAHV-----SGQVTLTDISNETALLAVQGPKALAVLQTLTDEPLSEIRPFRFKENVMFAAIPVLASRTGYTGEDGFELYVKAGDAAELWRAI---LAAGEPFGLL 224          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LEGPH (Aminomethyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gcvT PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17
Identity = 67/211 (31.75%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLT------KDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            KT LH  H+A G KMV F GW MP+ Y   + E     R +  +FDVSHM  + + G     FL KL+  DV  +   G    +   NE+GG IDD ++ +   D+  +V+N+  R  D+A I A  + F          + + R              + L+       D +S L    F  +D++        TG TGEDG EI VP+E
Sbjct:    4 KTPLHTTHLACGAKMVDFHGWDMPLHYGSQLNEHHA-VRNDAGMFDVSHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNYRVVLNSATRQNDVAWIRAKSEGFAV-------GLQERRELSMLAVQGPNAIAKTLSILAPAHVDAVSTL--TSFECVDVD--HWFFARTGYTGEDGLEIIVPNE 202          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LEGPA (Aminomethyltransferase OS=Legionella pneumophila (strain Paris) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17
Identity = 67/211 (31.75%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLT------KDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            KT LH  H+A G KMV F GW MP+ Y   + E     R +  +FDVSHM  + + G     FL KL+  DV  +   G    +   NE+GG IDD ++ +   D+  +V+N+  R  D+A I A  + F          + + R              + L+       D +S L    F  +D++        TG TGEDG EI VP+E
Sbjct:    4 KTPLHTTHLACGAKMVDFHGWDMPLHYGSQLNEHHA-VRNDAGMFDVSHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNYRVVLNSATRQNDVAWIRAKSEGFAV-------GLQERRELSMLAVQGPNAIAKTLSILAPAHVDAVSTL--TSFECVDVD--HWFFARTGYTGEDGLEIIVPNE 202          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CHLPD (Aminomethyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17
Identity = 61/210 (29.05%), Postives = 94/210 (44.76%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQH--LTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            +KKTAL+ +H   G +++ F G+ MP+QY   I E     R    LFDVSHM    + G+    FL+ +V  D++ +  G     +    NGG +DD +I ++     +L+VNA   +KD A ++ H+ +F      V    H +R                      D   L   +F          ++  TG TGE G EI +P+E A
Sbjct:    1 MKKTALYHWHEQAGARIIDFGGYLMPVQYSGIIAEHRA-VRSAAGLFDVSHMGNFYVTGERSEAFLQYMVTNDLSKVRDGEAQYNLMLYPNGGVVDDLIIYRLDSKTFFLIVNASNTEKDYAWLQQHIGAFDG----VCLEDHTDRLSLIALQGPVAIDIVKTVFPSVDFDALLQFQFCRTLYGDAPVMIARTGYTGEKGVEICLPNEAA 205          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LEGPL (Aminomethyltransferase OS=Legionella pneumophila (strain Lens) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.186e-17
Identity = 67/211 (31.75%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLT------KDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            KT LH  H+A G KMV F GW MP+ Y   + E     R +  +FDVSHM  + + G     FL KL+  DV  +   G    +   NE+GG IDD ++ +   D+  +V+N+  R  D+A I A  + F          + + R              + L+       D +S L    F  +D++        TG TGEDG EI VP+E
Sbjct:    4 KTPLHTTHLACGAKMVDFHGWDMPLHYGSQLNEHHA-VRNDAGMFDVSHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNYRVVLNSATRQNDVAWIRAKSEGFAV-------GLQERRELSMLAVQGPNAIAKTLSILAPAHVDAVSTL--TPFECVDVD--HWFFARTGYTGEDGLEIIVPNE 202          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LEGPC (Aminomethyltransferase OS=Legionella pneumophila (strain Corby) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.186e-17
Identity = 67/211 (31.75%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLT------KDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            KT LH  H+A G KMV F GW MP+ Y   + E     R +  +FDVSHM  + + G     FL KL+  DV  +   G    +   NE+GG IDD ++ +   D+  +V+N+  R  D+A I A  + F          + + R              + L+       D +S L    F  +D++        TG TGEDG EI VP+E
Sbjct:    4 KTPLHTTHLACGAKMVDFHGWDMPLHYGSQLNEHHA-VRNDAGMFDVSHMTIVDILGAGGRQFLRKLLTNDVDQITHNGKALYSCMCNEHGGIIDDLIVYQRASDNYRVVLNSATRQNDVAWIRAKSEGFAV-------GLQERRELSMLAVQGPNAIAKTLSILAPAHVDAVSTL--TPFECVDVD--HWFFARTGYTGEDGLEIIVPNE 202          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_RALME (Aminomethyltransferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.773e-17
Identity = 69/225 (30.67%), Postives = 95/225 (42.22%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLY--------------FGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGG 823
            L+ T L+  H A G +MV F GW MP+ Y   I E     R +  +FDVSHMC + L G     FL  L+  ++  L  PG    +   +E GG IDD ++    +D   LVVNA     D+  I++     TA G  V+  I   R                   +   K+Y              F    + D      ++  TG TGEDGFE+ VP+E   G
Sbjct:    3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHNA-VRADAGMFDVSHMCVVDLSGIHARAFLRGLLANNIDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRFRLVVNASTAVGDIEWIQSRN---TATGSGVT--ITPRRGDLAPACVSKLAIVAVQGPNARQKVYDAFPSTQPADTLKPFNAVVVHDAEMGELMVARTGYTGEDGFELVVPAENVAG 221          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BURP8 (Aminomethyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.773e-17
Identity = 65/212 (30.66%), Postives = 89/212 (41.98%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHI------EAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPS 808
            LK T LH  H A   +MV F GW MP+ Y   I E     R +  +FDVSHMC +   G+    F E+ +  +V  L   G    +   N  GG IDD ++    +DH  +VVNAG  +KD+A        E    + T +       +    +              H      +   F   R+ D       +  TG TGEDGFEI VP+
Sbjct:    4 LKHTPLHATHRALNARMVDFGGWDMPVNYGSQIEEHRA-VRTDAGMFDVSHMCVVDFTGERVRAFFERALANNVGKLQTAGKALYSCLLNPQGGVIDDLIVYYFGEDHFRVVVNAGTAEKDIAWFNKLNDEEGFGLTITPRRDYAIVAVQGPNA-----REKVWATVPHARAASEALKPFNAARVADTPFGELTVARTGYTGEDGFEIIVPA 209          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CUPTR (Aminomethyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=gcvT PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16
Identity = 67/221 (30.32%), Postives = 96/221 (43.44%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHL----------TKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGG 823
            L+ T L+  H A G +MV F GW MP+ Y   I E     R +  +FDVSHMC + L G +   FL  L+  +V  L  PG    +   +E+GG IDD ++    +D   LVVNAG    D+  I A  ++ T  G  ++    D                 +           T+   +   F    + D      ++  TG TGEDGFE+ VP+    G
Sbjct:    3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHHA-VRNDAGMFDVSHMCVVDLAGPNTRAFLRGLLANNVDKLQTPGKALYSCMLDEHGGVIDDLIVYFFAEDRFRLVVNAGTAVGDIDWIRARNEA-TGSGVTITPRREDVAPAGVPPLAIVAVQGPNARAKVWSTFPSTQPSDALKPFNAVVVQDPALGEVMVARTGYTGEDGFELVVPAASVAG 221          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_COXBU (Aminomethyltransferase OS=Coxiella burnetii GN=gcvT PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16
Identity = 67/210 (31.90%), Postives = 90/210 (42.86%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLY--FGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            + + L++ H       V FAGW MP+ Y   I E     RQ   +FDVSHM  + L+G++   FL  L+  DVA L+  G    T   N  GG IDD ++ +V      LVVNA  RDKD+A I+         G  VS     E               + +  + L         F  +        +  TG TGEDG EI VP+  A
Sbjct:    3 RHSPLYEEHAKAKAHFVDFAGWEMPLHYGSQIEEHH-QVRQRAGIFDVSHMGVIDLEGEEATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGYRLVVNAATRDKDIAWIKE-----KGAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLEALKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRA 206          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_BACSK3.040e-1729.69Aminomethyltransferase OS=Bacillus clausii (strain... [more]
GCST_LEGPH3.971e-1731.75Aminomethyltransferase OS=Legionella pneumophila s... [more]
GCST_LEGPA3.971e-1731.75Aminomethyltransferase OS=Legionella pneumophila (... [more]
GCST_CHLPD3.971e-1729.05Aminomethyltransferase OS=Chlorobium phaeobacteroi... [more]
GCST_LEGPL5.186e-1731.75Aminomethyltransferase OS=Legionella pneumophila (... [more]
GCST_LEGPC5.186e-1731.75Aminomethyltransferase OS=Legionella pneumophila (... [more]
GCST_RALME6.773e-1730.67Aminomethyltransferase OS=Ralstonia metallidurans ... [more]
GCST_BURP86.773e-1730.66Aminomethyltransferase OS=Burkholderia phymatum (s... [more]
GCST_CUPTR1.971e-1630.32Aminomethyltransferase OS=Cupriavidus taiwanensis ... [more]
GCST_COXBU1.971e-1631.90Aminomethyltransferase OS=Coxiella burnetii GN=gcv... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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