EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PSEPK (Aminomethyltransferase OS=Pseudomonas putida (strain KT2440) GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 66/211 (31.28%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS---LLTXTGSTGEDGFEISVPSEPA 817
            ++T L+D H+A G K V F GW MP+ Y  S +E     R +  +FDVSHM  + + G D   +L++L+  DVA L  PG    +   NE GG IDD ++ + +  +  LV NA  R K L  ++     F+     V + +  + +               L     + L   E R     GV+     +  TG TGEDG EI  P + A
Sbjct:    3 QRTLLYDLHLALGAKTVDFGGWDMPLHY-GSQVEEHHQVRSDCGVFDVSHMTVIDVDGTDATVWLQRLLANDVARLDDPGKALYSPLLNEQGGVIDDLIVYRTETGY-RLVTNAATRAKVLDWLQLQRAGFS-----VDFQVRPDLAILAIQGPRAREKVAALLSPARAAL-IRELR--PFEGVADGDWFIARTGYTGEDGLEIIFPGDQA 203          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BURPS (Aminomethyltransferase OS=Burkholderia pseudomallei GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 65/212 (30.66%), Postives = 89/212 (41.98%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS------LLTXTGSTGEDGFEISVPS 808
            LK T LH  H A   +MV F GW MP+ Y   I E     R +  +FDVSHMC +   G     F E  +  +VA L  PG    +   N  GG IDD ++    ++   +VVNAG  +KD+    A       +GG     I   R              +       ++    E +  +   V+        +  TG TGEDGFEI VP+
Sbjct:    4 LKTTPLHAAHRALNARMVDFGGWDMPVNYGSQIEEHQA-VRTDAGMFDVSHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTAEKDI----AWFNQLNEQGG-FGLTIAPRRDFAIVAAQGPNARAKVWDTVPCARAATSELKPFNAAQVAGTPFGDLTVARTGYTGEDGFEIIVPA 209          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BURP6 (Aminomethyltransferase OS=Burkholderia pseudomallei (strain 668) GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 65/212 (30.66%), Postives = 89/212 (41.98%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS------LLTXTGSTGEDGFEISVPS 808
            LK T LH  H A   +MV F GW MP+ Y   I E     R +  +FDVSHMC +   G     F E  +  +VA L  PG    +   N  GG IDD ++    ++   +VVNAG  +KD+    A       +GG     I   R              +       ++    E +  +   V+        +  TG TGEDGFEI VP+
Sbjct:    4 LKTTPLHAAHRALNARMVDFGGWDMPVNYGSQIEEHQA-VRTDAGMFDVSHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTAEKDI----AWFNQLNEQGG-FGLTIAPRRDFAIVAAQGPNARAKVWDTVPCARAATSELKPFNAAQVAGTPFGDLTVARTGYTGEDGFEIIVPA 209          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BURP0 (Aminomethyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 65/212 (30.66%), Postives = 89/212 (41.98%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS------LLTXTGSTGEDGFEISVPS 808
            LK T LH  H A   +MV F GW MP+ Y   I E     R +  +FDVSHMC +   G     F E  +  +VA L  PG    +   N  GG IDD ++    ++   +VVNAG  +KD+    A       +GG     I   R              +       ++    E +  +   V+        +  TG TGEDGFEI VP+
Sbjct:    4 LKTTPLHAAHRALNARMVDFGGWDMPVNYGSQIEEHQA-VRTDAGMFDVSHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTAEKDI----AWFNQLNEQGG-FGLTIAPRRDFAIVAAQGPNARAKVWDTVPCARAATSELKPFNAAQVAGTPFGDLTVARTGYTGEDGFEIIVPA 209          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BURMA (Aminomethyltransferase OS=Burkholderia mallei GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 65/212 (30.66%), Postives = 89/212 (41.98%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS------LLTXTGSTGEDGFEISVPS 808
            LK T LH  H A   +MV F GW MP+ Y   I E     R +  +FDVSHMC +   G     F E  +  +VA L  PG    +   N  GG IDD ++    ++   +VVNAG  +KD+    A       +GG     I   R              +       ++    E +  +   V+        +  TG TGEDGFEI VP+
Sbjct:    4 LKTTPLHAAHRALNARMVDFGGWDMPVNYGSQIEEHQA-VRTDAGMFDVSHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTAEKDI----AWFNQLNEQGG-FGLTIAPRRDFAIVAAQGPNARAKVWDTVPCARAATSELKPFNAAQVAGTPFGDLTVARTGYTGEDGFEIIVPA 209          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BURM9 (Aminomethyltransferase OS=Burkholderia mallei (strain NCTC 10229) GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 65/212 (30.66%), Postives = 89/212 (41.98%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS------LLTXTGSTGEDGFEISVPS 808
            LK T LH  H A   +MV F GW MP+ Y   I E     R +  +FDVSHMC +   G     F E  +  +VA L  PG    +   N  GG IDD ++    ++   +VVNAG  +KD+    A       +GG     I   R              +       ++    E +  +   V+        +  TG TGEDGFEI VP+
Sbjct:    4 LKTTPLHAAHRALNARMVDFGGWDMPVNYGSQIEEHQA-VRTDAGMFDVSHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTAEKDI----AWFNQLNEQGG-FGLTIAPRRDFAIVAAQGPNARAKVWDTVPCARAATSELKPFNAAQVAGTPFGDLTVARTGYTGEDGFEIIVPA 209          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BURM7 (Aminomethyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 65/212 (30.66%), Postives = 89/212 (41.98%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS------LLTXTGSTGEDGFEISVPS 808
            LK T LH  H A   +MV F GW MP+ Y   I E     R +  +FDVSHMC +   G     F E  +  +VA L  PG    +   N  GG IDD ++    ++   +VVNAG  +KD+    A       +GG     I   R              +       ++    E +  +   V+        +  TG TGEDGFEI VP+
Sbjct:    4 LKTTPLHAAHRALNARMVDFGGWDMPVNYGSQIEEHQA-VRTDAGMFDVSHMCVVDFTGPRVRAFFEHAIANNVAKLQTPGKALYSCLLNPQGGVIDDLIVYYFTEEFFRVVVNAGTAEKDI----AWFNQLNEQGG-FGLTIAPRRDFAIVAAQGPNARAKVWDTVPCARAATSELKPFNAAQVAGTPFGDLTVARTGYTGEDGFEIIVPA 209          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_RALEH (Aminomethyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 69/221 (31.22%), Postives = 95/221 (42.99%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLY--------------FGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            L+ T L+  H A G +MV F GW MP+ Y   I E     R +  +FDVSHMC + L G +   FL  L+  +V  L  PG    +   +E GG IDD ++    +D   LVVNA     D+  I A      A G DV+  I   R                   +  +K++              F    + D      ++  TG TGEDGFE+ VP+E
Sbjct:    3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHNA-VRTDAGMFDVSHMCVVDLAGANTRSFLRGLLANNVDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRFRLVVNASTALGDIEWIRARN---AATGSDVT--ITPRREDVAPAGVQPLAIVAVQGPNARTKVWSTFPSTQPSDTLKPFNAAVVQDPALGEIMVARTGYTGEDGFELVVPAE 217          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_NITEC (Aminomethyltransferase OS=Nitrosomonas eutropha (strain C91) GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 68/222 (30.63%), Postives = 95/222 (42.79%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHI----EAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKD--DLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAI 838
            LK T L+  H     KMV F GW MP+ Y   + E     R++  +FDVSHM  + L G++   FL  LV  ++  L  PG    T   N  GG IDD +I  + +    LVVNAG  DKD+  I      H    T         I  +               +  ++D      + FG +           +  TG TGEDGFEI++P++ A    Q +
Sbjct:    2 LKTTPLNAAHRGMHAKMVDFGGWDMPLHYGSQLDEHHA-VRRDAGMFDVSHMLTVDLHGENVRQFLRGLVANNIDKLTVPGKALYTCMLNPAGGIIDDLIIYFLSESWFRLVVNAGTADKDIDWITLQSSQHAPDLTITPRRDLAMIAVQGPNARAKVWAVIPDSKAASEDLKPFQSVAFGNY----------FIARTGYTGEDGFEITLPADEAAAFWQKL 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROAC (Aminomethyltransferase OS=Propionibacterium acnes GN=gcvT PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.488e-16
Identity = 57/220 (25.91%), Postives = 95/220 (43.18%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQH----LTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            L++T L   H + G     FAGW+MP++Y   + E     R+N  +FD+SHM  + + G D    L+  +   ++ +A G    ++   + GG +DD V   + D    +V NA   + DLA        F     D S                     Q     L  D++  + +      +++G   L+  TG TGEDG+E+ VP++ A    Q ++
Sbjct:    4 LRRTPLAAVHESLGASFTDFAGWNMPVRYSSDLAEHHA-VRKNAGIFDLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDYLVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAVKIVLAALQKANTTLDSDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAKAAAHLWQLLM 222          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_PSEPK4.390e-1631.28Aminomethyltransferase OS=Pseudomonas putida (stra... [more]
GCST_BURPS4.390e-1630.66Aminomethyltransferase OS=Burkholderia pseudomalle... [more]
GCST_BURP64.390e-1630.66Aminomethyltransferase OS=Burkholderia pseudomalle... [more]
GCST_BURP04.390e-1630.66Aminomethyltransferase OS=Burkholderia pseudomalle... [more]
GCST_BURMA4.390e-1630.66Aminomethyltransferase OS=Burkholderia mallei GN=g... [more]
GCST_BURM94.390e-1630.66Aminomethyltransferase OS=Burkholderia mallei (str... [more]
GCST_BURM74.390e-1630.66Aminomethyltransferase OS=Burkholderia mallei (str... [more]
GCST_RALEH5.733e-1631.22Aminomethyltransferase OS=Ralstonia eutropha (stra... [more]
GCST_NITEC5.733e-1630.63Aminomethyltransferase OS=Nitrosomonas eutropha (s... [more]
GCST_PROAC7.488e-1625.91Aminomethyltransferase OS=Propionibacterium acnes ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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