EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5170 contig Csv1_Contig5170:159..1042. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_DESHY (Aminomethyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=gcvT PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.219e-27
Identity = 74/217 (34.10%), Postives = 113/217 (52.07%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            LK+T L++ H   G K++ F GW MP+QY   ++E     R    LFDVSHM  + LKGKD + FL+ L+  DV+ +       +      GG +DD ++ +   +H  LVVNA   DKD A ++A  + F     + S     + +             Q LT  DL+++ +  F+  +++GV  L++ TG TGEDGFEI +P E A    + IL+
Sbjct:    4 LKRTPLYEQHRRAGAKLIDFGGWEMPVQYA-GVIEEHKAVRSKAGLFDVSHMGEVELKGKDSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFLLVVNAANTDKDFAWMQAQAEGFEISLENRS----GDFAQLALQGPWAEKILQKLTSMDLAQINYYWFKHGEVDGVLCLISRTGYTGEDGFEIYLPPEHAPRMWERILE 215          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_DESHD (Aminomethyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=gcvT PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.219e-27
Identity = 74/217 (34.10%), Postives = 113/217 (52.07%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            LK+T L++ H   G K++ F GW MP+QY   ++E     R    LFDVSHM  + LKGKD + FL+ L+  DV+ +       +      GG +DD ++ +   +H  LVVNA   DKD A ++A  + F     + S     + +             Q LT  DL+++ +  F+  +++GV  L++ TG TGEDGFEI +P E A    + IL+
Sbjct:    4 LKRTPLYEQHRRAGAKLIDFGGWEMPVQYA-GVIEEHKAVRSKAGLFDVSHMGEVELKGKDSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFLLVVNASNTDKDFAWMQAQAEGFEISLENRS----GDFAQLALQGPWAEKILQKLTSMDLAQINYYWFKHGEVDGVLCLISRTGYTGEDGFEIYLPPEHAPRMWERILE 215          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_ALKOO (Aminomethyltransferase OS=Alkaliphilus oremlandii (strain OhILAs) GN=gcvT PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.608e-26
Identity = 76/207 (36.71%), Postives = 109/207 (52.66%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSE 811
            LK+T L D H   GGK+V FAGW M +Q++    E     R    +FDVSHM  + ++GKD   F++ LV  DVA L       T     +GG +DD ++ K   ++ YLVVNA   DKD A +  +  ++  +  ++S    D  S             Q LT  DLS++ F  F+  + ING + L++ TG TGEDGFEI V ++
Sbjct:    4 LKRTPLFDAHNRYGGKLVDFAGWEMSVQFEGLTAEHEA-VRNAAGIFDVSHMGEIEVRGKDAEAFVQYLVTNDVAALEDNQIVYTFMCYPDGGIVDDLLVYKFNKEYYYLVVNASNSDKDFAWMNENKGAYDVEIINIS----DSVSQVAVQGPKAEEIVQELTDTDLSEIPFFYFKNDVVINGANCLISRTGYTGEDGFEIYVDND 205          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_THEM4 (Aminomethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=gcvT PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26
Identity = 72/201 (35.82%), Postives = 109/201 (54.23%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEI 796
            +K T L++ HV  G KMV FAG++MPIQY  SI +  L  R+N  +FDVSHM  + ++GKD   F++ L+  D   L PG    T   NENGG +DD +  K+ ++   LV+NA   +KD + ++   +SF     + S    DE               Q +T  DL ++ +  F   ++  + ++++ TG TGEDGFEI
Sbjct:    1 MKYTPLYEEHVKLGAKMVDFAGFNMPIQYT-SIKDEVLAVRKNVGMFDVSHMGEVIVEGKDSTKFVDFLITNDFKNLKPGEIVYTAMCNENGGFVDDLLAYKISEEKAMLVINASNIEKDFSWMKKISESFDVTLENKS----DEYVLIAVQGPNAQKTLQKITNVDLEQIGYYTFTEGNVLDIKAIISRTGYTGEDGFEI 196          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACLD (Aminomethyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gcvT PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.583e-26
Identity = 82/230 (35.65%), Postives = 120/230 (52.17%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGLV 877
            LK+T L D +   GGK + F GW +P+Q+  SI E     R    LFDVSHM  + + G D +PFL+KL+  DV+ L  G    T    E+GG+IDD ++ K   +   LV+NA   DKD+  +  H+K      GDVS  ++ DE +             + +   DL++L    FR    +  V +L++ TG TGEDGFEI   +E A    + +L+    G+ +GLV
Sbjct:    2 LKRTPLFDLYKEYGGKTIDFGGWELPVQFS-SIKEEHEAVRTKAGLFDVSHMGEVEITGTDSLPFLQKLLTNDVSTLKEGGAQYTAMCYEDGGTIDDLLVYKKAANVYMLVINAANIDKDVDWMNKHIK------GDVSVRNVSDEIALLALQGPKAEAILKQVADHDLAELKPFMFRDDAAVGSVQALVSRTGYTGEDGFEIYCRNEDAACIWKLLLET---GKDSGLV 221          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_ACIBL (Aminomethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=gcvT PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 72/212 (33.96%), Postives = 111/212 (52.36%), Query Frame = 2
Query:  191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKD--SIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSS-LLTXTGSTGEDGFEISVPSEPA 817
            N++KTAL+  H  +G KMV ++GW MP++Y     +M+  L  R    LFDVSHM  + + G + +  ++ L + D + L  G    +     NG  +DD ++ K  DD   LV+NAG R+KD+  ++ + + F     D+S    D+ +             Q LT  DLSK+ F  F    + G+ + L+  TG T EDGFEI +PS+ A
Sbjct:    8 NIRKTALNATHRQSGAKMVDYSGWDMPVEYPSVGGLMKEHLAVRAGVGLFDVSHMGDIRVHGPEALKAVQYLTMNDASKLNTGQAQYSAMLYPNGTFVDDVIVHKFADDDYLLVINAGTREKDVNWVKDNTRQFKVTVEDLS----DQFTQIAIQGPKGVDTLQKLTDVDLSKVKFYWFTRGTVAGLKNVLIARTGYTAEDGFEIYIPSDAA 215          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CLOBM (Aminomethyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=gcvT PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.111e-26
Identity = 80/224 (35.71%), Postives = 111/224 (49.55%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEF-RILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE 856
            E LK T L   +   GGK+V FAG+ +P Q+K  + E     R+   LFDVSHM    + GKD   F++ L+  D+  L       T   NE+GG IDD ++ K  +D  +LV+NA  +DKD+  I  H   F  +  DVS    D  +             Q +   DL ++ F +  R + ++G   L++ TG TGEDGFEI    E A G   AIL   KE
Sbjct:    2 EGLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEAMVTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIADVS----DSIAQLALQGPLAEEILQKIVDVDLQEIKFFKLRRDVLVDGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKE 220          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACA2 (Aminomethyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=gcvT PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.111e-26
Identity = 84/230 (36.52%), Postives = 116/230 (50.43%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLY-FGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGLV 877
            LK+T L+D +   GGK + F GW +P+Q+  SI E     R    LFDVSHM  + + GKD + FL+K++  DVA L PG    T     +GG++DD +I +  +    LV+NA   +KD+A +  H +      GDV+  +  D  S               LT+ DLS L  F      D+ G   LL+ TG TGEDGFE+   +E A    + I   L  GE  GLV
Sbjct:    2 LKRTPLYDVYKEYGGKTIDFGGWELPVQFS-SIKEEHEAVRTKAGLFDVSHMGEVEVSGKDALSFLQKMMTNDVADLKPGNALYTAMCYPDGGTVDDLLIYQKSESCYLLVINASNIEKDIAWLTEHTE------GDVTLTNQSDGISLLAVQGPNAQSVLAKLTECDLSSLKPFTFIDKADVAGRQVLLSRTGYTGEDGFELYCRNEDAVHLFKEI---LAAGEHEGLV 221          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CLOB1 (Aminomethyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.982e-26
Identity = 80/224 (35.71%), Postives = 112/224 (50.00%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEF-RILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE 856
            ++LK T L   +   GGK+V FAG+ +P Q+K  + E     R+   LFDVSHM    + GKD   F++ L+  D+  L       T   NE+GG IDD ++ K  +D  +LV+NA  +DKD+  I  H   F  +  DVS    D  +             Q +   DL ++ F +  R + +NG   L++ TG TGEDGFEI    E A G   AIL   KE
Sbjct:    2 KDLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEAMVTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIVDVS----DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKE 220          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACWK (Aminomethyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.982e-26
Identity = 76/218 (34.86%), Postives = 117/218 (53.67%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            L++T L D +   GGK V F GW +P+Q+  SI E     R    LFDVSHM  + +KG D + FL+++V  DV+ L  G    T    ENGG++DD +I K  ++   LV+NA   +KD   + +H+    AK  +VS     E +             Q +  +DL ++ F +F+  + ++G+ +L++ TG TGEDGFEI   SE A    + +L+
Sbjct:    4 LQRTPLFDVYAKYGGKTVDFGGWELPVQFS-SIKEEHEAVRTGAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHVIG-DAKVVNVS----SEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNNILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE 215          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_DESHY7.219e-2734.10Aminomethyltransferase OS=Desulfitobacterium hafni... [more]
GCST_DESHD7.219e-2734.10Aminomethyltransferase OS=Desulfitobacterium hafni... [more]
GCST_ALKOO1.608e-2636.71Aminomethyltransferase OS=Alkaliphilus oremlandii ... [more]
GCST_THEM42.743e-2635.82Aminomethyltransferase OS=Thermosipho melanesiensi... [more]
GCST_BACLD3.583e-2635.65Aminomethyltransferase OS=Bacillus licheniformis (... [more]
GCST_ACIBL4.679e-2633.96Aminomethyltransferase OS=Acidobacteria bacterium ... [more]
GCST_CLOBM6.111e-2635.71Aminomethyltransferase OS=Clostridium botulinum (s... [more]
GCST_BACA26.111e-2636.52Aminomethyltransferase OS=Bacillus amyloliquefacie... [more]
GCST_CLOB17.982e-2635.71Aminomethyltransferase OS=Clostridium botulinum (s... [more]
GCST_BACWK7.982e-2634.86Aminomethyltransferase OS=Bacillus weihenstephanen... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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