EY659467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_MYCPA (Aminomethyltransferase OS=Mycobacterium paratuberculosis GN=gcvT PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14 Identity = 67/237 (28.27%), Postives = 99/237 (41.77%), Query Frame = 2 Query: 179 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHL-TKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE--GEVAGLVA 880 S+ +L L D H G F GW MP+ Y ++ E R LFDVSH+ ++G F+ + D+ + PG T+ NE+GG IDD + V DD I+LV NA A +EA + A G ++H + L D+ + + + V + TG TGE G+E+ P E AG A+ + + G+ AGL A Sbjct: 2 SNEADLLHGPLEDRHRDLGASFAEFGGWLMPVSYAGTVSEHNAT-RNAVGLFDVSHLGKALVRGTGAARFVNSALTNDLNRIGPGKAQYTLCCNESGGVIDDLIAYYVDDDEIFLVPNAA---NTAAVVEALQGA--APAGVTVRNLHRSYAVLAVQGPRSANVLAELGLPSDMDYMAYAD---TSFRQVPVRVCRTGYTGEHGYELLPPWESAGVVFDALAAAVSQAGGQPAGLGA 229
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROM5 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9515) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14 Identity = 62/222 (27.93%), Postives = 101/222 (45.50%), Query Frame = 2 Query: 191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV-----KDDHIYLVVNAGCRDKDLAHIEAHMKS-----FTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFG-EFRILDINGVSS--LLTXTGSTGEDGFEISVPSEPA 817 +L K+ L+ ++ + K++ FAGW MPI + I E + R + FD+SHM +SL+G + +++K ++ + G G T+ NE GG IDD +I + I+L+VNA D I+ ++ + AK V I R+ H+ YFG E++ D + TG TGE+G EI +P++ A Sbjct: 2 DLLKSPLYSKYIESNAKLINFAGWEMPISFSGLINEHE-SVRTSAGFFDISHMGVISLRGINPKEYIQKFFPTNLYSFSEGQGLYTLILNEKGGIIDDLIIYDLGRQEGDISEIFLIVNASRYQDDFLWIKNNLNTNQVSVSNAKTDKVLLSIQG-RNSFTLFEEWIGSSISHIP-------YFGCEYKNFDHISTEGKFFFSKTGYTGENGLEILLPAQSA 214
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROMS (Aminomethyltransferase OS=Prochlorococcus marinus (strain AS9601) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13 Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 2 Query: 191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV---KDD--HIYLVVNAGCRDKDLAHIEAHM 577 +L K+ L+ +V + K+V FAGW MPI + I E + R + LFD+SHM +S+KG + +++KL ++ G G TV N+ GG IDD +I + K+D + L+VNA ++D I+ ++ Sbjct: 2 DLLKSPLYSKYVESNAKLVDFAGWEMPISFSGLIKEHE-SVRYSAGLFDISHMGVISIKGINPKDYIQKLFPTNLYSFCEGQGLYTVMLNDKGGIIDDLIIYDLGIQKNDISELLLIVNASRYEEDFQWIKNNL 134
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROM2 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9215) GN=gcvT PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13 Identity = 45/134 (33.58%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV---KDD--HIYLVVNAGCRDKDLAHIEAHM 577 +L K+ L+ +V + K+V FAGW MPI + I E + R + LFD+SHM +S+KG + +++KL ++ + G G TV N+ GG IDD +I + ++D + L+VNA ++D I+ ++ Sbjct: 2 DLLKSPLYSKYVESNAKLVNFAGWEMPISFSGLIKEHE-SVRSSAGLFDISHMGVISIKGINPKDYIQKLFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQENDLSELLLIVNASRYEEDFQWIKNNL 134
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROM0 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9301) GN=gcvT PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.478e-13 Identity = 43/134 (32.09%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKV---KDD--HIYLVVNAGCRDKDLAHIEAHM 577 +L+K+ L+ ++ + K+V FAGW MPI + I E + R + LFD+SHM +S+KG + +++K ++ + G G TV N+ GG IDD +I + ++D + L+VNA ++D I+ ++ Sbjct: 2 DLRKSPLYSKYIESNAKLVDFAGWEMPISFSGLIKEHE-SVRSSAGLFDISHMGVISVKGINPKDYIQKFFPTNLYSFSEGQGLYTVMLNDKGGIIDDLIIYDLGIQENDITELLLIVNASRYEEDFQWIKNNL 134
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_AQUAE (Aminomethyltransferase OS=Aquifex aeolicus GN=gcvT PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.478e-13 Identity = 59/204 (28.92%), Postives = 90/204 (44.12%), Query Frame = 2 Query: 200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811 +T L+ H K FAGW+MP+QY SI+E R +FD+SHM L ++ D L+ ++ L+ G + NE GG DD + + + +L VNA R K + + H+K G V + +S +S L + F++ D ++++ TG TGEDGFEI V E Sbjct: 8 QTPLYYVHKHLKAKFTNFAGWTMPLQYT-SIIEEVRAVRXRAGVFDISHMGRLLIE--DPEKKLQYFTTNNLDKLSVGKVQYNLLPNEKGGIKDDVTVYMLSEIEFFLCVNAANRQKVINWLSPHLKLRDLSGELVQIALQGPKSEEIISKFY-----------PVSDLKYYRFKVFD----KTIISRTGYTGEDGFEIYVSPE 193
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_SYNY3 (Aminomethyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=gcvT PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13 Identity = 58/211 (27.49%), Postives = 91/211 (43.13%), Query Frame = 2 Query: 200 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWH-IHDERSXXXXXXXXXXXXXQHLTKDDLSKL-YFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSE 811 +T L++ K+ F GW MP+Q+ + + R+ +FD+SHM L G+ + L+ LV +D+ L PG TV N GG IDD ++ + + L+VNA KD + H+ ++ + + E+ Q L +L +L FG + + + TG TGEDGFEI V E Sbjct: 9 RTPLYNLITEQTTKLTTFGGWEMPVQFA-GLKQEHQAVREKVGMFDISHMGKFVLTGQKVLAALQSLVPSDLDRLTPGKAQYTVLLNAQGGIIDDIIVYDQGKNPEGQERVTLIVNAATTVKDKQWLLEHLPE------EIDFQDLSREKVLIALQGPEALTILQPLVDQNLGELPAFGHLE-AEFLREKAFIARTGYTGEDGFEIMVSPE 211
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_NOCFA (Aminomethyltransferase OS=Nocardia farcinica GN=gcvT PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13 Identity = 63/233 (27.04%), Postives = 102/233 (43.78%), Query Frame = 2 Query: 191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDL-SKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLK--EGEVAGLVA 880 +L + +HD H G F GW MP+ Y ++ E R LFDVSH+ ++ G F+ + D+ + PG T+ + +GG IDD + V DD I+LV NA + A + A + + G V+ D+ Q L L +++ + F +G + TG TGE G+E+ A +A+L+ ++ +G+ AGL A Sbjct: 5 DLLRGPVHDLHGELGATFAEFGGWQMPVAYAGTVGEHQA-VRTTVGLFDVSHLGKATVAGPGAAQFVNATLTNDLGRIHPGKAQYTLCCSADGGVIDDLIAYYVADDEIFLVPNAA----NTAAVVAELAAAAPAGVTVT----DQHRDYAVFAVQGPRSAQVLAALGLPTEMEYMAFADAAWDGRPIRVCRTGYTGEHGYEVLPRWADAEPVFRALLEQVRAADGQPAGLGA 228
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FRASN (Aminomethyltransferase OS=Frankia sp. (strain EAN1pec) GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 52/203 (25.62%), Postives = 87/203 (42.86%), Query Frame = 2 Query: 194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKD-SIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHL-TKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEI 796 L+++ LH+ HV G K F GW MPI+Y ++ R +FDVSH+ + G F+ + D+ + PG T+ +E GG +DD + D+++LV NA + + + A A G +H E + + L D + + F + + G ++ +G TGE GFE+ Sbjct: 4 LRRSPLHERHVELGAKTAAFGGWEMPIEYAGRGVLAEHAAVRGAVGIFDVSHLGKARVAGPGAAEFVNTCLTNDLRRVGPGQAQYTLCCDETGGVVDDLIAYYYAVDNVFLVPNAANTAEVVRRLAAQ-----APAGVAVTDLHTEFAVLAVQGPAAPEVLRKLGLPADGAYMSFAD---AEWKGRPVIVCRSGYTGEAGFEL 198
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_FRAAA (Aminomethyltransferase OS=Frankia alni (strain ACN14a) GN=gcvT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11 Identity = 38/128 (29.69%), Postives = 62/128 (48.44%), Query Frame = 2 Query: 191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKD-SIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEA 571 +L+++ L+ HV G KM F GW MPI+Y ++ R +FDVSH+ + G F+ + D+ +APG T+ N+ GG +DD + + + LV NA + +A + A Sbjct: 3 DLRRSPLYGRHVDLGAKMAGFGGWEMPIEYAGRGVLAEHQAVRGAVGIFDVSHLGKAEVTGAGAAEFVNACLSNDLGRIAPGQAQYTLCCNDEGGVVDDLIAYLFSGERVLLVPNAANNAEVVARLAA 130 The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bpback to top |