EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5170 contig Csv1_Contig5170:159..1042. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACC1 (Aminomethyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 72/218 (33.03%), Postives = 115/218 (52.75%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            L++T L D +   GGK + F GW +P+Q+  SI E     R    LFDVSHM  + +KG D + FL+++V  DV+ L  G    T    ENGG++DD +I K  ++   LV+NA   +KD   + +H+      G     ++  E +             Q +  +DL ++ F +F+  + ++G+ +L++ TG TGEDGFEI   SE A    + +L+
Sbjct:    4 LQRTPLFDVYAKYGGKTIDFGGWELPVQFS-SIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHV-----IGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE 215          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACC0 (Aminomethyltransferase OS=Bacillus cereus (strain AH820) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 72/218 (33.03%), Postives = 115/218 (52.75%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            L++T L D +   GGK + F GW +P+Q+  SI E     R    LFDVSHM  + +KG D + FL+++V  DV+ L  G    T    ENGG++DD +I K  ++   LV+NA   +KD   + +H+      G     ++  E +             Q +  +DL ++ F +F+  + ++G+ +L++ TG TGEDGFEI   SE A    + +L+
Sbjct:    4 LQRTPLFDVYAKYGGKTIDFGGWELPVQFS-SIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHV-----IGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE 215          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACAN (Aminomethyltransferase OS=Bacillus anthracis GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 72/218 (33.03%), Postives = 115/218 (52.75%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            L++T L D +   GGK + F GW +P+Q+  SI E     R    LFDVSHM  + +KG D + FL+++V  DV+ L  G    T    ENGG++DD +I K  ++   LV+NA   +KD   + +H+      G     ++  E +             Q +  +DL ++ F +F+  + ++G+ +L++ TG TGEDGFEI   SE A    + +L+
Sbjct:    4 LQRTPLFDVYAKYGGKTIDFGGWELPVQFS-SIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHV-----IGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE 215          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACAH (Aminomethyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 72/218 (33.03%), Postives = 115/218 (52.75%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            L++T L D +   GGK + F GW +P+Q+  SI E     R    LFDVSHM  + +KG D + FL+++V  DV+ L  G    T    ENGG++DD +I K  ++   LV+NA   +KD   + +H+      G     ++  E +             Q +  +DL ++ F +F+  + ++G+ +L++ TG TGEDGFEI   SE A    + +L+
Sbjct:    4 LQRTPLFDVYAKYGGKTIDFGGWELPVQFS-SIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHV-----IGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE 215          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACAC (Aminomethyltransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 72/218 (33.03%), Postives = 115/218 (52.75%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            L++T L D +   GGK + F GW +P+Q+  SI E     R    LFDVSHM  + +KG D + FL+++V  DV+ L  G    T    ENGG++DD +I K  ++   LV+NA   +KD   + +H+      G     ++  E +             Q +  +DL ++ F +F+  + ++G+ +L++ TG TGEDGFEI   SE A    + +L+
Sbjct:    4 LQRTPLFDVYAKYGGKTIDFGGWELPVQFS-SIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHV-----IGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE 215          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACAA (Aminomethyltransferase OS=Bacillus anthracis (strain A0248) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 72/218 (33.03%), Postives = 115/218 (52.75%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            L++T L D +   GGK + F GW +P+Q+  SI E     R    LFDVSHM  + +KG D + FL+++V  DV+ L  G    T    ENGG++DD +I K  ++   LV+NA   +KD   + +H+      G     ++  E +             Q +  +DL ++ F +F+  + ++G+ +L++ TG TGEDGFEI   SE A    + +L+
Sbjct:    4 LQRTPLFDVYAKYGGKTIDFGGWELPVQFS-SIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHV-----IGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLE 215          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_DESRM (Aminomethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=gcvT PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.778e-25
Identity = 73/218 (33.49%), Postives = 109/218 (50.00%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            + LK+T L++ H+A G KMV F GW MP+QY+  I E     R    LFDVSHM  + + G     F+++LV  D++ L PG    +   N  GG++DD ++ +++D    LVVNA   DKD   I +        G ++  ++ +                Q LT  DLS +    F    + G+  L++ TG TGE GFE+  P+  A    QAI+
Sbjct:    2 QELKRTPLYNIHLAAGAKMVEFGGWLMPVQYEGIIAEHQA-VRSAAGLFDVSHMGEIQISGPTAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQYLLVVNASNTDKDFHWIVSQQ----VPGVEIQ-NVSEVTCQLALQGPQAEKILQRLTAVDLSHIKSFCFVYGAVEGIHCLISRTGYTGEAGFELYFPASHAERVWQAIM 213          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_PROA2 (Aminomethyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=gcvT PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.961e-25
Identity = 71/217 (32.72%), Postives = 110/217 (50.69%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            +KKTAL+ +H A G K++ F G+ MP+QY   I E T   R +  LFDVSHM    +KG+    FL+ +   DV  L+ G    T+     GG +DD +I ++  D  ++VVNA   +KD + ++ H+ SF  +G  +  H  +                +  T  + S +    FR +  NG   ++  TG TGE G EISVP++ A     A+++
Sbjct:    1 MKKTALYAWHEAAGAKIIDFGGYLMPVQYSGIIAEHTC-VRTSAGLFDVSHMGNFMVKGRGAKAFLQHMTSNDVDKLSDGQAQYTLLLYPEGGIVDDLIIYRIDADTWFMVVNASNMEKDYSWLQEHLGSF--EGVQLENHTEELSLIALQGPRSMEILDRVFTGGECSGIKPFHFRTVPFNGREVIVAATGYTGERGVEISVPNDAATALWVALME 214          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LISMO (Aminomethyltransferase OS=Listeria monocytogenes GN=gcvT PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.961e-25
Identity = 73/218 (33.49%), Postives = 108/218 (49.54%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSXXXXXXXXXXXXXQHLTKDDLSKL-YFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            L KT +H  +   G K + F GW +P+Q+     E     R +  LFDVSHM  + +KG D   +L+ L+  D+  +  G     +   E GG++DD V+ K  +    LVVNA   DKD   +  +++      GDVS  ++  E                 LT  DLS + +FG     D+ GV ++++ +G TGEDGFEI +PS  AG   +AIL
Sbjct:    4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDFEWMVKNIR------GDVSVTNVSSEYGQLALQGPNAEKILSKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAIL 214          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_LISMF (Aminomethyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gcvT PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.961e-25
Identity = 73/218 (33.49%), Postives = 108/218 (49.54%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS-WHIHDERSXXXXXXXXXXXXXQHLTKDDLSKL-YFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            L KT +H  +   G K + F GW +P+Q+     E     R +  LFDVSHM  + +KG D   +L+ L+  D+  +  G     +   E GG++DD V+ K  +    LVVNA   DKD   +  +++      GDVS  ++  E                 LT  DLS + +FG     D+ GV ++++ +G TGEDGFEI +PS  AG   +AIL
Sbjct:    4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDFEWMVKNIR------GDVSVTNVSSEYGQLALQGPSAEKILAKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAIL 214          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_BACC11.362e-2533.03Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACC01.362e-2533.03Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACAN1.362e-2533.03Aminomethyltransferase OS=Bacillus anthracis GN=gc... [more]
GCST_BACAH1.362e-2533.03Aminomethyltransferase OS=Bacillus thuringiensis (... [more]
GCST_BACAC1.362e-2533.03Aminomethyltransferase OS=Bacillus anthracis (stra... [more]
GCST_BACAA1.362e-2533.03Aminomethyltransferase OS=Bacillus anthracis (stra... [more]
GCST_DESRM1.778e-2533.49Aminomethyltransferase OS=Desulfotomaculum reducen... [more]
GCST_PROA23.961e-2532.72Aminomethyltransferase OS=Prosthecochloris aestuar... [more]
GCST_LISMO3.961e-2533.49Aminomethyltransferase OS=Listeria monocytogenes G... [more]
GCST_LISMF3.961e-2533.49Aminomethyltransferase OS=Listeria monocytogenes s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
back to top