EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5170 contig Csv1_Contig5170:159..1042. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CLOBJ (Aminomethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=gcvT PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.153e-24
Identity = 79/224 (35.27%), Postives = 110/224 (49.11%), Query Frame = 2
Query:  188 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEF-RILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKE 856
            E LK T L   +   GGK+V FAG+ +P Q+K  + E     R+   LFDVSHM    + GKD   F++ L+  D+  L       T   NE+GG IDD ++ K  +D  +LV+NA  +DKD+  I  H   F  +  DVS    D  +             Q +   DL ++ F +  R + ++G   L++ TG TGEDGFEI    E A     AIL   KE
Sbjct:    2 EGLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEAMVTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIVDVS----DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVDGKKCLVSRTGYTGEDGFEIYCKPEDAKELWHAILNAGKE 220          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_BACCN (Aminomethyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=gcvT PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.153e-24
Identity = 70/209 (33.49%), Postives = 111/209 (53.11%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFR-ILDINGVSSLLTXTGSTGEDGFEISVPSEPA 817
            L++T L D +   GGK + F GW +P+Q+  SI E     R    LFDVSHM  + + G D + FL+++V  DV+ L  G    T    ENGG++DD +I K  ++   LV+NA   +KD   + +H+      G     ++ +E +             Q +  +DL ++ F +F+  + ++G+ +L++ TG TGEDGFEI   SE A
Sbjct:    4 LQRTPLFDVYAKYGGKTIDFGGWELPVQFS-SIKEEHEAVRTAAGLFDVSHMGEVEVTGADSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHV-----IGDTKVVNVSNEIAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDVLVDGIPALVSRTGYTGEDGFEIYCKSEDA 206          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAAW (Aminomethyltransferase OS=Staphylococcus aureus (strain MW2) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAAT (Aminomethyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAAS (Aminomethyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAAN (Aminomethyltransferase OS=Staphylococcus aureus (strain N315) GN=gcvT PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAAM (Aminomethyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gcvT PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAAE (Aminomethyltransferase OS=Staphylococcus aureus (strain Newman) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAAC (Aminomethyltransferase OS=Staphylococcus aureus (strain COL) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAA9 (Aminomethyltransferase OS=Staphylococcus aureus (strain JH9) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_CLOBJ1.153e-2435.27Aminomethyltransferase OS=Clostridium botulinum (s... [more]
GCST_BACCN1.153e-2433.49Aminomethyltransferase OS=Bacillus cereus subsp. c... [more]
GCST_STAAW1.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAAT1.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAAS1.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAAN1.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAAM1.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAAE1.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAAC1.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAA91.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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