EY659467

Overview
NameEY659467
Unique NameEY659467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5170 contig Csv1_Contig5170:159..1042. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAA8 (Aminomethyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAA3 (Aminomethyltransferase OS=Staphylococcus aureus (strain USA300) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAA2 (Aminomethyltransferase OS=Staphylococcus aureus (strain JH1) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAA1 (Aminomethyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_CHLT3 (Aminomethyltransferase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.966e-24
Identity = 71/217 (32.72%), Postives = 106/217 (48.85%), Query Frame = 2
Query:  194 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILK 844
            +K T LH  H   G K+V FAG+ MP+QY D I+      R+   LFDVSHM    +KGK    FL+ +   DV  L  G    ++   E+GG +DD ++ K+ D+H +L+VNA   +KD   ++ H          V  +  DE S               LT   L  + +  F   D+ G  +L++ TG TGE GFE+ + +E A     A+++
Sbjct:    1 MKYTPLHKIHQQLGAKLVDFAGFEMPVQY-DGILVEHKAVREAVGLFDVSHMGEFEVKGKGAKAFLQNMTTNDVESLCDGKAQYSLLLYEDGGVVDDLLVYKIADEHYFLIVNASNIEKDFDWLKQHQPDDEV----VLENRSDELSLIAIQGPKAEAVLSKLTDVPLDAIKYYHFVFGDVCGKRTLISRTGYTGEAGFELCMANEHAEEIWHALIE 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAAR (Aminomethyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=gcvT PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24
Identity = 72/205 (35.12%), Postives = 105/205 (51.22%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + + G   +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFGAIVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_YERPS (Aminomethyltransferase OS=Yersinia pseudotuberculosis GN=gcvT PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 75/216 (34.72%), Postives = 103/216 (47.69%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            K+T L+D HVA G +MV F GW MP+ Y   I E  L  RQ+  +FDVSHM  + L G     FL  L+  DVA L  PG    T   NE+GG IDD ++  + +D+  LVVN+  RDKDLA I  H + +      V   + D+ +               L   +  +   G      I      +  TG TGE G+EI++P +      Q +L
Sbjct:    3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHL-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPY-----QVEVTVRDDLALIAVQGPQAQQKVATLLTTEQQQAIAGMKPFFGIQTGDLFIATTGYTGEAGYEIALPKQQVVAFWQQLL 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_YERP3 (Aminomethyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gcvT PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 75/216 (34.72%), Postives = 103/216 (47.69%), Query Frame = 2
Query:  197 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAIL 841
            K+T L+D HVA G +MV F GW MP+ Y   I E  L  RQ+  +FDVSHM  + L G     FL  L+  DVA L  PG    T   NE+GG IDD ++  + +D+  LVVN+  RDKDLA I  H + +      V   + D+ +               L   +  +   G      I      +  TG TGE G+EI++P +      Q +L
Sbjct:    3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHL-VRQDAGMFDVSHMTIVDLHGNRTREFLRYLLANDVAKLTQPGKALYTGMLNESGGVIDDLIVYFLSEDYFRLVVNSATRDKDLAWISQHAEPY-----QVEVTVRDDLALIAVQGPQAQQKVATLLTTEQQQAIAGMKPFFGIQTGDLFIATTGYTGEAGYEIALPKQQVVAFWQQLL 212          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_STAAB (Aminomethyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gcvT PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.720e-24
Identity = 71/205 (34.63%), Postives = 105/205 (51.22%), Query Frame = 2
Query:  185 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRI-LDINGVSSLLTXTGSTGEDGFEI 796
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++                 L  +D++++   EF+  + +   + +L+ +G TGEDGFEI
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAARYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGVIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVKLFAANVILSQSGYTGEDGFEI 201          
BLAST of EY659467 vs. ExPASy Swiss-Prot
Match: GCST_MOOTA (Aminomethyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=gcvT PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.471e-24
Identity = 78/229 (34.06%), Postives = 112/229 (48.91%), Query Frame = 2
Query:  191 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSXXXXXXXXXXXXXQHLTKDDLSKLYFGEFRILDINGVSSLLTXTGSTGEDGFEISVPSEPAGGPXQAILKNLKEGEVAGLV 877
            +LKKT L+  HVA G KMV F GW MP+QY  SI+E     R    LFDVSHM  +++KG D +  ++KL+  D           +     +GG +DD ++    +    LVVNAG  DKD A I+ +   F  +  ++S       +             + LT+ DL+ L +  +    + GV  L++ TG TGEDGFE+   +  A    + I   L  G  AGLV
Sbjct:    3 DLKKTPLYGEHVAAGAKMVEFGGWLMPVQY-SSIIEEHQRVRNCAGLFDVSHMGEITIKGPDALALVQKLLTNDADRATGDRVIYSPMCYPDGGVVDDLLVYPRGEGEYLLVVNAGNIDKDFAWIQENASGFRVEVSNIS----AATAQLALQGPRALEILRPLTRVDLASLGYYRWTEGQVLGVHCLISRTGYTGEDGFELYFEAAAAPTMWRNI---LAAGREAGLV 223          
The following BLAST results are available for this feature:
BLAST of EY659467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_STAA81.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAA31.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAA21.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAA11.505e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_CHLT31.966e-2432.72Aminomethyltransferase OS=Chloroherpeton thalassiu... [more]
GCST_STAAR3.353e-2435.12Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_YERPS4.380e-2434.72Aminomethyltransferase OS=Yersinia pseudotuberculo... [more]
GCST_YERP34.380e-2434.72Aminomethyltransferase OS=Yersinia pseudotuberculo... [more]
GCST_STAAB5.720e-2434.63Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_MOOTA7.471e-2434.06Aminomethyltransferase OS=Moorella thermoacetica (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659467 ID=EY659467; Name=EY659467; organism=Citrus sinensis; type=EST; length=884bp
CCTGGTATTGCTCTTTCGGGCTCCCANATTTGCTTGTTTCTGAGATAAAG
AAGAAAACCCCATCTCTATATTTATATCGAATAAAATGAGAGGAGGGAGT
CTGTGGCAGCTTGGACAATCGATCACCCGTCGTTTGGCTCGGGCTGATAA
GAAGACTATAGCTCGTAGACACTTTGCCTCAGATGCTGAAAACCTGAAAA
AAACTGCCCTTCATGACTTTCATGTGGCTAATGGTGGAAAGATGGTTCCA
TTTGCTGGATGGAGCATGCCTATTCAGTACAAGGACTCAATTATGGAATC
TACTTTGAATTGTCGGCAGAATGGTAGTCTCTTTGATGTCTCCCATATGT
GTGGGCTGAGCCTCAAAGGGAAGGATTGCGTCCCTTTCCTTGAGAAGCTT
GTGATCGCTGATGTTGCTGGACTTGCCCCAGGAACTGGGACTCTTACAGT
CTTTACAAATGAAAATGGGGGTTCAATCGATGATTCAGTTATTACCAAGG
TGAAGGATGATCACATATACCTTGTTGTGAATGCTGGCTGCAGGGATAAG
GATCTTGCTCACATTGAGGCACATATGAAGAGTTTCACAGCCAAAGGGGG
GGATGTCTCGTGGCACATCCATGATGAGAGATCTCTTCTTGCCCTTCANG
GCCCCCTTGCTGCCCCAGTTCTTCAACACCTGACAAAAGATGACTTGAGC
AAGTTATACTTCGGGGAATTCCGAATTTTGGATATAAATGGTGTATCCTC
GCTTCTCACTANGACAGGGTCCACTGGTGAAGATGGATTTGAAATCTCTG
TTCCATCTGAGCCGGCCGGGGGACCTTGNCAAGCCATTCTGAAGAATCTG
AAGGAAGGTGAGGTGGCAGGTCTTGTTGCCTCAG
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