EY659462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 403.29 bits (1035), Expect = 7.206e-129 Identity = 202/263 (76.81%), Postives = 225/263 (85.55%), Query Frame = 2 Query: 2 NGFGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAXAGRMGGTTQYTVNNQMVNATLMNIADNPTCVPLPGMYNKEEEPPCP 784 N A TSVPS++FFG SLKKV ++ + KV + + ++ A EVDE TK+DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG MCCL INDLDA AGRMGGTTQYTVNNQMVNATLMNIADNPT V LPGMYNK+E P Sbjct: 19 NNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVP 278 HSP 2 Score: 79.7221 bits (195), Expect = 7.206e-129 Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 762 KRKNPRVPIIVTGYDFSTLDAPLIRDGRMGEFYWAPNKEDRIGGCRVFFR 911 K++N RVPIIVTG DFSTL APLIRDGRM +FYWAP +EDRIG C+ FR Sbjct: 271 KQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 320
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 395.201 bits (1014), Expect = 5.096e-127 Identity = 203/266 (76.32%), Postives = 221/266 (83.08%), Query Frame = 2 Query: 11 GAATSVPS-SSFFGTSLKK--VSSRIP---PSKVPSASFKITA--EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAXAGRMGGTTQYTVNNQMVNATLMNIADNPTCVPLPGMYNKEEEPPCP 784 GA S P+ SSF G L K VS+ + S ++ FK A EVDE KQT +DRWKGLAYD SDDQQDITRGKG VD+LFQAPMG GTH AV+SSYDYISQG ++YN DN +DG YIA FMDKLVVH++KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKM CL INDLDA AGRMGGTTQYTVNNQMVNATLMNIADNPT V LPGMYNKE+ P P Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVP 275 HSP 2 Score: 81.6481 bits (200), Expect = 5.096e-127 Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 762 KRKNPRVPIIVTGYDFSTLDAPLIRDGRMGEFYWAPNKEDRIGGCRVFFR 911 K NPRVPIIVTG DFSTL APLIRDGRM +FYWAP +EDRIG C+ FR Sbjct: 268 KEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 317
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 391.349 bits (1004), Expect = 4.285e-126 Identity = 201/261 (77.01%), Postives = 217/261 (83.14%), Query Frame = 2 Query: 11 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAXAGRMGGTTQYTVNNQMVNATLMNIADNPTCVPLPGMYNKEEEPPCP 784 GA S P+ F G +K +K+ S ++ A E+D+ KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAPMG GTH A++SSY+YISQGLR Y+ DNT+DGLYIAPAFMDKL+VH+ KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAADII KGKMCCL INDLDA AGRMGGTTQYTVNNQMVNATLMNIAD PT V LPGMYNKEE P P Sbjct: 10 GAPASTPTI-FLGKKVKNYYHG--GNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVP 266 HSP 2 Score: 82.4185 bits (202), Expect = 4.285e-126 Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 762 KRKNPRVPIIVTGYDFSTLDAPLIRDGRMGEFYWAPNKEDRIGGCRVFFR 911 K +NPRVPIIVTG DFSTL APLIRDGRM +FYWAP +EDRIG C+ FR Sbjct: 259 KEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 308
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 386.341 bits (991), Expect = 3.027e-124 Identity = 197/261 (75.48%), Postives = 216/261 (82.76%), Query Frame = 2 Query: 11 GAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITAEVDENKQTKQ--DRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAXAGRMGGTTQYTVNNQMVNATLMNIADNPTCVPLPGMYNKEEEPPCP 784 GA S P++ F G LKK V+S + S + + T EN K+ D+WKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLR Y+ DNT+ G YIAPAFMDKLVVH++KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDA AGRMGGTTQYTVNNQMVNATLMNIAD PT V LPGMYNK E P P Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVP 269 HSP 2 Score: 81.2629 bits (199), Expect = 3.027e-124 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 762 KRKNPRVPIIVTGYDFSTLDAPLIRDGRMGEFYWAPNKEDRIGGCRVFFR 911 KR+NPRVPI+VTG DFSTL APLIRDGRM +FYWAP ++DRIG C+ F+ Sbjct: 262 KRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 311
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 369.007 bits (946), Expect = 1.170e-117 Identity = 185/262 (70.61%), Postives = 210/262 (80.15%), Query Frame = 2 Query: 2 NGFGAATSVPSSSFFGTSLKKVSS-RIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAXAGRMGGTTQYTVNNQMVNATLMNIADNPTCVPLPGMYNKEEEPPCP 784 NG A SVP+S F G+SLKK ++ R P S S + +T + EN++ D+W LA D SDDQ DI RGKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++LPNIK+PLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDL+ AGRMGGTTQYTVNNQMVNATLMNIADNPT V LPGMYNK++ P Sbjct: 19 NGSSAGASVPTSGFLGSSLKKHTNVRFPSS---SRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVP 277 HSP 2 Score: 76.6406 bits (187), Expect = 1.170e-117 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 762 KRKNPRVPIIVTGYDFSTLDAPLIRDGRMGEFYWAPNKEDRIGGCRVFFR 911 K+ N RVPIIVTG DFSTL APLIRDGRM +FYWAP +EDRIG C F+ Sbjct: 270 KQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFK 319
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.298e-94 Identity = 153/241 (63.49%), Postives = 179/241 (74.27%), Query Frame = 2 Query: 71 SRIPPSKVPSASFKITAEVDENKQTKQDRWKGL--AYDESDDQQDITRGKGAVDSLFQAPMGTG-THYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAXAGRMGGTTQYTVNNQMVNATLMNIADNPTCVPLPGMYNKEEEPPCP 784 +R+ V A ++ A + + RW+ + D SDDQQDITRG+ VD LFQ G G TH AV+SS +Y+SQ ++N N DG YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLIR RYREA+DII+KG+MC L INDLDA AGRMG TTQYTVNNQMVNATLMNIADNPT V LPG+Y EE P P Sbjct: 18 ARVATRSVRRAQLQVVAP----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVP 252 HSP 2 Score: 69.3218 bits (168), Expect = 3.298e-94 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 3 Query: 774 PRVPIIVTGYDFSTLDAPLIRDGRMGEFYWAPNKEDRIGGCRVFFR 911 PRVPI+ TG DFSTL APLIRDGRM ++YW P +EDRIG C F+ Sbjct: 249 PRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQ 294
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.613e-63 Identity = 97/141 (68.79%), Postives = 116/141 (82.27%), Query Frame = 2 Query: 341 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDAXAGRMGGTTQYTVNNQMVNATLMNIADNPTCVPLPGMYN 760 YIAP F+DKL VHITKNF+++P ++VPLILGI G KG+GK+FQCEL F KMGI ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDA AGR TQYTVN Q+VNATLMNIADNPT V LPG Y+ Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYD 144 HSP 2 Score: 66.6254 bits (161), Expect = 1.613e-63 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 777 RVPIIVTGYDFSTLDAPLIRDGRMGEFYWAPNKEDRIG 890 RVPIIVTG DFSTL APLIRDGRM +FYW PN++D++G Sbjct: 150 RVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVG 187
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.347e-62 Identity = 97/141 (68.79%), Postives = 116/141 (82.27%), Query Frame = 2 Query: 341 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDAXAGRMGGTTQYTVNNQMVNATLMNIADNPTCVPLPGMYN 760 YIAP F+DKL VHITKNF++LP ++VPLILGI G KG+GK+FQCEL F KMG+ ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDA AGR TQYTVN Q+VNATLMNIADNPT V LPG Y+ Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYD 144 HSP 2 Score: 63.1586 bits (152), Expect = 1.347e-62 Identity = 27/38 (71.05%), Postives = 34/38 (89.47%), Query Frame = 3 Query: 777 RVPIIVTGYDFSTLDAPLIRDGRMGEFYWAPNKEDRIG 890 RVPIIVTG DFSTL APLIRDGRM +FYW P++++++G Sbjct: 150 RVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVG 187
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.328e-37 Identity = 88/165 (53.33%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 164 GLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAXAGRM 658 GLAYD SDDQQDITRG VDSLFQAPM GTHYAVMSSY+YISQGLR VPLILGIWGGK MGINPIMMSAGELESGNAGEPA KMCCL INDLDA AGR+ Sbjct: 1 GLAYDISDDQQDITRGM--VDSLFQAPMNDGTHYAVMSSYEYISQGLR------------------------------------VPLILGIWGGK--------------MGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRV 96 HSP 2 Score: 37.7354 bits (86), Expect = 6.328e-37 Identity = 19/22 (86.36%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 777 RVPIIVTGYDFSTLDAPLIRDG 842 RVPIIVTG DFSTL APLIR G Sbjct: 95 RVPIIVTGNDFSTLYAPLIRIG 116
BLAST of EY659462 vs. ExPASy Swiss-Prot
Match: RCA_VITSX (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 38/61 (62.30%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 488 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAXAGRMGGTT 670 +MGINPIMMSAGELESGNAGEPA KMCCL INDLDA AGR+G T Sbjct: 15 RMGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRIGVCT 58 The following BLAST results are available for this feature:
BLAST of EY659462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659462 ID=EY659462; Name=EY659462; organism=Citrus sinensis; type=EST; length=928bpback to top |