EY659457 | Citrus Genome Database

Overview


Name	EY659457
Unique Name	EY659457
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	952

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_ACECL (Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.047e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 140.584 bits (353), Expect = 1.280e-32
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.887 bits (346), Expect = 8.298e-32
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDT++NVK+KI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 73.9442 bits (180), Expect = 1.471e-12
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + ++NVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.368e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 140.198 bits (352), Expect = 1.672e-32
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.502 bits (345), Expect = 1.084e-31
Identity = 70/76 (92.11%), Postives = 72/76 (94.74%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTI LEVESSDTI+NVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 72.4034 bits (176), Expect = 4.281e-12
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTI L+ ES + I+NVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.368e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 140.198 bits (352), Expect = 1.672e-32
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.502 bits (345), Expect = 1.084e-31
Identity = 70/76 (92.11%), Postives = 72/76 (94.74%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTI+NVK KI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 73.559 bits (179), Expect = 1.922e-12
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + I+NVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.786e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 139.813 bits (351), Expect = 2.184e-32
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.117 bits (344), Expect = 1.415e-31
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKE IPPDQQRLIFAG QL+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 73.1738 bits (178), Expect = 2.510e-12
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ E+ + I+NVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_CAEEL (Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.786e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 139.813 bits (351), Expect = 2.184e-32
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 137.117 bits (344), Expect = 1.415e-31
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKE IPPDQQRLIFAG QL+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 73.1738 bits (178), Expect = 2.510e-12
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ E+ + I+NVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_EUPEU (Ubiquitin OS=Euplotes eurystomus PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.333e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 139.428 bits (350), Expect = 2.852e-32
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 136.732 bits (343), Expect = 1.848e-31
Identity = 69/76 (90.79%), Postives = 71/76 (93.42%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITL+VE SDTIDNVK KI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 72.7886 bits (177), Expect = 3.278e-12
Identity = 38/56 (67.86%), Postives = 41/56 (73.21%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL  E  + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.333e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 139.428 bits (350), Expect = 2.852e-32
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 136.732 bits (343), Expect = 1.848e-31
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTI+NVK KI DKE IPPDQQRLIFAG QL+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 73.559 bits (179), Expect = 1.922e-12
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + I+NVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_XENLA (Ubiquitin OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.047e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 139.043 bits (349), Expect = 3.725e-32
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 136.346 bits (342), Expect = 2.414e-31
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVE SDTI+NVKAKI DKE IPPDQQRLIFAG QL+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 72.4034 bits (176), Expect = 4.281e-12
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ E  + I+NVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_SPOFR (Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.047e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 139.043 bits (349), Expect = 3.725e-32
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 136.346 bits (342), Expect = 2.414e-31
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVE SDTI+NVKAKI DKE IPPDQQRLIFAG QL+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 72.4034 bits (176), Expect = 4.281e-12
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ E  + I+NVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_RAT (Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.047e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 139.043 bits (349), Expect = 3.725e-32
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 136.346 bits (342), Expect = 2.414e-31
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVE SDTI+NVKAKI DKE IPPDQQRLIFAG QL+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 72.4034 bits (176), Expect = 4.281e-12
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ E  + I+NVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

The following BLAST results are available for this feature:

BLAST of EY659457 vs. ExPASy Swiss-Prot

BLAST of EY659457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ACECL	1.047e-34	96.05	Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1	[more]
UBIQ_TRYCR	1.368e-34	97.37	Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1	[more]
UBIQ_ACACA	1.368e-34	97.37	Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1	[more]
UBIQ_GEOCY	1.786e-34	96.05	Ubiquitin OS=Geodia cydonium PE=3 SV=1	[more]
UBIQ_CAEEL	1.786e-34	96.05	Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 ...	[more]
UBIQ_EUPEU	2.333e-34	96.05	Ubiquitin OS=Euplotes eurystomus PE=3 SV=1	[more]
UBIQ_AGLNE	2.333e-34	96.05	Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1	[more]
UBIQ_XENLA	3.047e-34	96.05	Ubiquitin OS=Xenopus laevis PE=1 SV=1	[more]
UBIQ_SPOFR	3.047e-34	96.05	Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1	[more]
UBIQ_RAT	3.047e-34	96.05	Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-009-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659457 ID=EY659457; Name=EY659457; organism=Citrus sinensis; type=EST; length=952bp
ATTCAAAGCCCGACCCACGCGTCCGGCAAATCTCTGNGAAAACTCTCACC
GGCAAGACAATCACCCTTGAGGTTGAAAGCTCCGACACCATTGATAATGT
AAAAGCCAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGGC
TTATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTCGCTGACTAT
AATATCCAGAAGGAATCAACCCTCCACTTGGTCCTTCGACTTAGGGGTGG
TATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGG
TGGAAAGCTCCGACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAG
GAAGGGATCCCACCAGACCAACAGAGGCTTATCTTTGCTGGTAAACAGCT
TGAGGATGGTCGCACACTTGCTGATTATAACATCCAGAAGGAGTCAACCC
TCCACTTGGTCCTCCGTCTCCGTGGTGGTATGCAGATCTTTGTAAAGACC
CTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCCGACACCATTGA
CAATGTCAAAGCCAAAATTCATGATAAGGAAAGGATCCCACCAGACCAGC
AAAGGCTCATCTTTGCCGGGTAACAACTAGATGATGGACGCACACTTGCA
GACTACAACATCCAGAAAGAATCAACCCTCCATTTGGTCCTTCGTCTCAG
GGGTGGCATGCAGATTTTTGTGAAACCCCTGACTGGTAAGACTATAACTT
TGAAGGGTGAAAGCTTTGAACCGATCGACAATGTCAAGGGCAAGATCCAG
GACAAGGAAGGCATCCCACCTGACAAAAGAAGGTAATCTTTTCCGGCAAA
CAACTTGGAAGATGGCGGACTTTTGGTGCTTCAACATCCAAAGGGAGCAA
ACCCTCCTTTGGGGCCTTCGCCCCGGGGGGGCTGCAAATTCTTGGAAAAC
CC