EY659449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: SGCE_ECOLI (Protein sgcE OS=Escherichia coli (strain K12) GN=sgcE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.621e-18 Identity = 65/215 (30.23%), Postives = 101/215 (46.98%), Query Frame = 2 Query: 59 IIVSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKDYAEAIKGIKT 703 +I+ PS+ SAN ++ A++ +H+D+ D F+ NIT G V A+ T PL H M+ P++ + + VH E + TLT+I+ GA+AG+V NPAT + A + +D V++M+ P GQ FI S +KI +R + W DGG+ A AG + G A+F + DY + T Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFHFMLARPQRWFNALAEIRPAWIFVHAETLD--YPSETLTEIRHTGARAGLVFNPATPIDAWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQ--TECW--ADGGITLAAAQQLAAAGAQHMVIGRALFSSSDYRATLAQFAT 209
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: LSRE_SALPA (Putative epimerase lsrE OS=Salmonella paratyphi A GN=lsrE PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.835e-16 Identity = 62/215 (28.84%), Postives = 106/215 (49.30%), Query Frame = 2 Query: 65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLT-----QIKSLGAKA----GVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKDYAE 682 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V+ L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + +G + G+ L PAT L I +L V+++ +++VNPG+G + ++++ L + + I +DG + I G + +GSA+F AE Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVEQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSALFRDDRLAE 232
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: LSRE_SALTY (Putative epimerase lsrE OS=Salmonella typhimurium GN=lsrE PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15 Identity = 60/208 (28.85%), Postives = 103/208 (49.52%), Query Frame = 2 Query: 65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLT-----QIKSLGAKA----GVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVF 661 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + +G + G+ L PAT L I +L V+++ +++VNPG+G + ++++ L + + I +DG + I G + +GSA+F Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSALF 225
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: LSRE_SALTI (Putative epimerase lsrE OS=Salmonella typhi GN=lsrE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15 Identity = 59/208 (28.37%), Postives = 101/208 (48.56%), Query Frame = 2 Query: 65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKS---------LGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVF 661 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + + G+ L PAT L I +L V+++ +++VNPG+G + ++++ L + + I +DG + I G + +GSA+F Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWAAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSALF 225
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: LSRE_SALPB (Putative epimerase lsrE OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lsrE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15 Identity = 60/208 (28.85%), Postives = 103/208 (49.52%), Query Frame = 2 Query: 65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLT-----QIKSLGAKA----GVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVF 661 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + +G + G+ L PAT L I +L V+++ +++VNPG+G + ++++ L + + I +DG + I G + +GSA+F Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSALF 225
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: LSRE_SALCH (Putative epimerase lsrE OS=Salmonella choleraesuis GN=lsrE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15 Identity = 60/208 (28.85%), Postives = 103/208 (49.52%), Query Frame = 2 Query: 65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLT-----QIKSLGAKA----GVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVF 661 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + +G + G+ L PAT L I +L V+++ +++VNPG+G + ++++ L + + I +DG + I G + +GSA+F Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSALF 225 The following BLAST results are available for this feature:
BLAST of EY659449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659449 ID=EY659449; Name=EY659449; organism=Citrus sinensis; type=EST; length=888bpback to top |