EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ALISL (Trigger factor OS=Aliivibrio salmonicida (strain LFI1238) GN=tig PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 62/227 (27.31%), Postives = 115/227 (50.66%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE---YDEGSRR 740
            K  +F  E G  +++PGF D I G + G+  +  + FPE +  E+L+G  A+F +   ++  R+LP+++D    K       +E +K  + +   RE+ QT K++  + AI + L +   ID+P +L +++       Q+L+ QA  +       A S+P+  +E  E Q +    V    L +G++ K E L+ + ++ VK + N +A   +   E   Y EG+ +
Sbjct:  181 KADNFPLEMGQGRMIPGFEDGIKGKKAGDELTINVNFPEDYHAENLKGKAAEFAITVVKVEARELPEMNDEFVTK-FGAQGGVEGLKTEVRKNMERELAQTVKNKIKEQAI-NGLVEQNNIDVPSALIDQE------VQVLRQQAVQRFGGN---ADSAPELPRELFEEQAKRRVVV---GLLLGEVIKTEELK-ADDEKVKALINEMASAYEDPTEVVAYYEGNEQ 392          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PHOPR (Trigger factor OS=Photobacterium profundum GN=tig PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 54/206 (26.21%), Postives = 104/206 (50.49%), Query Frame = 3
Query:  105 DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE 719
            ++++PGF DSI G + GE  +  + FPE +  E+L+G  A F +   ++  ++LP+L +    K      +IE +K  + +   RE++Q  K +  +  +LD L +  +I++P +L +++        +L+ QA  +       A ++P+  +E  E Q +    V    L +G++ K E L+ + ED VK +   +A   +   E
Sbjct:  192 NRMIPGFEDSIVGKKAGEEFTLEVTFPEEYHAENLKGKAASFAITLHKVEAQELPELTEEFIAKFGVLDGSIEGLKTEVRKNMERELKQAVKGRIKEQ-VLDGLVEQNDINVPAALIDQE------INVLRQQAAQRFGGD---AKNTPELPRELFEEQAKRRVVV---GLLIGEVIKTEELK-ADEDRVKAIITEMASAYEDPTE 383          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PELPD (Trigger factor OS=Pelobacter propionicus (strain DSM 2379) GN=tig PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 50/214 (23.36%), Postives = 103/214 (48.13%), Query Frame = 3
Query:   45 NVQNIPDAETKGFHFDTEDG-DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 683
            +V   P+  T   +   E G  ++LP F D + G++ GE+K   +  PE++R   + G +  F V   E+  ++LP+L+D  A +      T+EQ++E + +  ++ EQ   +Q     ++  L +   +D+PQS+ + Q  Q+    L  ++  +K     +  +        F E   ++ T+ ++  L +  + ++E+   S E++ K  E
Sbjct:  173 SVDGFPEESTSAENAVVEVGAHRLLPEFEDQLVGMKCGESKHVTVTLPEAYRNPEVAGKEGAFMVTLNEIKRKELPELNDEFA-QQFGEFETVEQLREKMTEYHQQHEQDRIEQEQRETVIQALIEKNPLDVPQSMVKRQVEQM----LQNLKNRLKSRNMSMEMMGMDD--DSFRERVRDSATDKVRGGLLLMALIEKEDFSVSDEEIEKRYE 379          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_METPP (Trigger factor OS=Methylibium petroleiphilum (strain PM1) GN=tig PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 67/285 (23.51%), Postives = 133/285 (46.67%), Query Frame = 3
Query:    6 VDISATTIDADESNVQNIP--DAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-EQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE------YDEGSRREQVIDILEGS*SLEWVRDMQKISXXPDENIP 833
            VD    TID  E  +  +P    + +GF F   +G ++L  F  ++ G++ GE+K+F L FP+ ++ + + G +A F V   ++  + LP++D++ A  L     T+E ++  + +      +        +A+++ L K+ ++D+P++L + E  R + GA+    Q G+K       A  +P   + F E         ++  L V ++ +   LQ   E +   +E     L  +KPE      + +  R  +V  ++  +   E+V    K+S   D+ +P
Sbjct:  161 VDGDRVTIDF-EGKIDGVPFDGGKAEGFQFILGEG-RMLEAFEKAVRGMKTGESKTFPLQFPDDYQGKEVAGKEADFLVTLTKIEAQHLPEVDEAFAQSLGIQDPTLEGLRADIRKNLEREVKNRLIARNKSAVMEALIKVADLDLPKALVQNETDRMIEGARADLKQRGIK------DADKAPIPAEIFHEQAERR----VRLGLVVAELVRTNQLQAKGEQIGAHIEE--MALSYEKPEEVRRWYFGDRQRLAEVEALVVENNVTEFVLSKAKVS---DKQLP 428          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CLOD6 (Trigger factor OS=Clostridium difficile (strain 630) GN=tig PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 57/233 (24.46%), Postives = 114/233 (48.93%), Query Frame = 3
Query:   75 KGFHFDTEDGDKV-LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQ-AGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEG 767
            KG +++   G    +PGF + + G + GE     + FPE +  + L G    F V+  ++  ++L  LDD  A K      +++++K  +  K  E  +   D  T N++++++ +  EI+IP+ + + Q   +      Q+Q  G  L  QQL  ++  + ++E  E + E+   ++K +L +  I K E ++ + E+   E+E  +A     + E  E S R+   + ++G
Sbjct:  183 KGENYNLVIGSNTFIPGFEEQLVGKKAGEEVEVNVTFPEEYHSQDLAGKPVVFNVKINDVKVKELSALDDEFA-KDTSEFDSLDELKADVRAKLEEEAKNRADAETRNSVVEKVAENTEIEIPEVMIQHQIDNMLNELNYQLQYQGFGL--QQLLEMTG-RTMEELREERKEDAKKLVKSSLVLEAITKAEGIEATEEEFKAELE-KMASAYNMEVEKIEASLRDADKEDIKG 410          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_VIBFM (Trigger factor OS=Vibrio fischeri (strain MJ11) GN=tig PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 62/227 (27.31%), Postives = 115/227 (50.66%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPE---YDEGSRR 740
            K  +F  E G  +++PGF D I G + G+  +  + FPE +  E+L+G  AQF ++  ++  R+LP+L+D    K       +E +K  + +   RE+ Q  K++  + AI + L +   ID+P +L +++       Q+L+ QA  +       A ++P+  +E  E Q +    V    L +G++ K E L+ + ++ VK + N +A   +   E   Y EG+ +
Sbjct:  181 KAENFPLEMGQGRMIPGFEDGIKGKKAGDELTIDVNFPEEYHAENLKGKAAQFAIKVVKVEARELPELNDEFVAK-FGAEGGVEGLKAEVRKNMERELAQAVKNKIKEQAI-NGLVEQNNIDVPSALIDQE------VQVLRQQAVQRFGGN---ADTAPELPRELFEEQAKRRVVV---GLLLGEVIKSEELK-ADDEKVKALINEMASAYEDPTEVVAYYEGNEQ 392          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRR6 (Trigger factor OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=tig PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 56/215 (26.05%), Postives = 98/215 (45.58%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQ 710
            KG +F    G  + +PGF D + G   GET    + FPE ++ E L G +A+F     E+  +++P LDD LA  +     T+  +KE   ++    ++     A + A +D   +  EI ++P+ +  E+  +     L  +Q    +N      ++     +E L NQ +    +  K NL +  + K E    S E++ KEVE   A+   +
Sbjct:  183 KGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGKEAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEETYKDAVEGAAIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQR-QGINPDMYFQITG--TTQEDLHNQYQAEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNME 394          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRPZ (Trigger factor OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=tig PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 53/211 (25.12%), Postives = 100/211 (47.39%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLEN-QTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE 698
            KG +F  E G  + +PGF D + G + G+     + FPES++ E L G  A+F     E+  +++P+LDD LA  +     T+E +K    ++    ++T+ D A + A ++      EI D+P+ +  E+  +     +  MQ    ++ +    L+     +E L N  +      +K NL +  I K E  + +  ++ +E+ +   E
Sbjct:  183 KGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGKAAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETSYDDAVEGAAIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQR-QGISPEMYFQLTG--TTQEDLHNPYSAEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATE 390          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_STRP2 (Trigger factor OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=tig PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 56/215 (26.05%), Postives = 98/215 (45.58%), Query Frame = 3
Query:   75 KGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEI-DIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTE-NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQ 710
            KG +F    G  + +PGF D + G   GET    + FPE ++ E L G +A+F     E+  +++P LDD LA  +     T+  +KE   ++    ++     A + A +D   +  EI ++P+ +  E+  +     L  +Q    +N      ++     +E L NQ +    +  K NL +  + K E    S E++ KEVE   A+   +
Sbjct:  183 KGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGKEAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEETYKDAVEGAAIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQR-QGINPDMYFQITG--TTQEDLHNQYQAEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNME 394          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_AYWBP (Trigger factor OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=tig PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 51/213 (23.94%), Postives = 102/213 (47.89%), Query Frame = 3
Query:  114 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKL-LPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQL---YGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPE 719
            LPGF D + G+++G+ K   + FP  + Q+ L   +  F V   ++  + +P+L D+L   L L   +T+E++K    +   + ++  + +     +++QL K  E+ IPQ +  ++   L   +  QL Q    ++  +Q L  +   K  KEF +   +N    ++  L +  +  +E L  S E + ++ +N        + ++KQ  PE
Sbjct:  199 LPGFEDQMLGMKQGQNKDINITFPSDYHQKKLANKKVIFKVTLHQIKTKKIPQLTDNLVKLLKLANVSTVEELKNNTKKTLLDQKKHKEKENIKKQVIEQLVKNSELQIPQEIISQEKTHLQKEFEKQLKQQNLTLEQYKQYL-GIGDEKMEKEFNQQAQKN----LQYRLIIEQVAFQEKLTISKEKIEQQYKNLSNHYKVPVNQIKQNLPE 406          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_ALISL6.273e-1327.31Trigger factor OS=Aliivibrio salmonicida (strain L... [more]
TIG_PHOPR8.193e-1326.21Trigger factor OS=Photobacterium profundum GN=tig ... [more]
TIG_PELPD8.193e-1323.36Trigger factor OS=Pelobacter propionicus (strain D... [more]
TIG_METPP8.193e-1323.51Trigger factor OS=Methylibium petroleiphilum (stra... [more]
TIG_CLOD68.193e-1324.46Trigger factor OS=Clostridium difficile (strain 63... [more]
TIG_VIBFM1.070e-1227.31Trigger factor OS=Vibrio fischeri (strain MJ11) GN... [more]
TIG_STRR61.070e-1226.05Trigger factor OS=Streptococcus pneumoniae (strain... [more]
TIG_STRPZ1.070e-1225.12Trigger factor OS=Streptococcus pyogenes serotype ... [more]
TIG_STRP21.070e-1226.05Trigger factor OS=Streptococcus pneumoniae serotyp... [more]
TIG_AYWBP1.070e-1223.94Trigger factor OS=Aster yellows witches'-broom phy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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