EY659430

Overview
NameEY659430
Unique NameEY659430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHEPC (Malate dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=mdh PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.044e-49
Identity = 107/190 (56.32%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E +A  CP A V +I+NPVN+TV IAAEV KKAG YD  +L GVT LDV+R+ TF+AE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAATCPKALVGIITNPVNTTVAIAAEVMKKAGVYDKNRLFGVTTLDVIRSETFIAELKGLNVADVKINVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SERP5 (Malate dehydrogenase OS=Serratia proteamaculans (strain 568) GN=mdh PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.044e-49
Identity = 107/196 (54.59%), Postives = 133/196 (67.86%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYS 765
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVR L + +A  CP A + +I+NPVN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE                H+GVT LPLLSQ+ P V+++
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALHGADVVLISAGVARKPGMDRSDLFNVNAGIVRNLIQQVATTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTSLDIIRSNTFVAELKGKQPEELNVPVIGGHSGVTILPLLSQI-PGVSFT 195          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHESR (Malate dehydrogenase OS=Shewanella sp. (strain MR-7) GN=mdh PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.282e-49
Identity = 107/190 (56.32%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E +A  CP A V +I+NPVN+TV IAAEV KKAG YD  +L GVT LDV+R+ TF+AE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSQLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGIITNPVNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSETFIAELKGLNVADVKVNVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHESM (Malate dehydrogenase OS=Shewanella sp. (strain MR-4) GN=mdh PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.282e-49
Identity = 107/190 (56.32%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E +A  CP A V +I+NPVN+TV IAAEV KKAG YD  +L GVT LDV+R+ TF+AE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSQLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGIITNPVNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSETFIAELKGLNVADVKVNVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHEON (Malate dehydrogenase OS=Shewanella oneidensis GN=mdh PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 5.282e-49
Identity = 107/190 (56.32%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E +A  CP A V +I+NPVN+TV IAAEV KKAG YD  +L GVT LDV+R+ TF+AE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGIITNPVNTTVAIAAEVMKKAGVYDKNRLFGVTTLDVIRSETFIAELKGLNVADVKINVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_HAEIN (Malate dehydrogenase OS=Haemophilus influenzae GN=mdh PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.282e-49
Identity = 109/190 (57.37%), Postives = 130/190 (68.42%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K+  P  + L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E +A  CP A V +I+NPVN+TV IAAEV KKAG YD +KL GVT LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKLQLPAGTDLSLYDIAPVTPGVAVDVSHIPTAVNVKGFSGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVRGLIEKVAVTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKRKLFGVTTLDVLRSETFVAELKGLNVSRTSVPVIGGHSGVTILPLLSQVQ 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_VIBSL (Malate dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=mdh PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.899e-49
Identity = 106/190 (55.79%), Postives = 132/190 (69.47%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA++GAAGGIGQ LA+L+K   P  S L LYD+   TPGV AD+SH+ T   ++G+ G+     AL G D+V+I AGV RKPGM R DLFN+NAGIV++L E IA  CP A V +I+NPVN+TVPIAAEV KKAG YD ++L G+T LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAGEDPTP-ALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAEKIAVTCPTACVGIITNPVNTTVPIAAEVLKKAGVYDKRRLFGITTLDVIRSETFVAELKDKDPGDIRVPVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_VIBPA (Malate dehydrogenase OS=Vibrio parahaemolyticus GN=mdh PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.899e-49
Identity = 106/190 (55.79%), Postives = 132/190 (69.47%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA++GAAGGIGQ LA+L+K   P  S L LYD+   TPGV AD+SH+ T   ++G+ G+     AL G D+V+I AGV RKPGM R DLFN+NAGIV++L E IA  CP A V +I+NPVN+TVPIAAEV KKAG YD ++L G+T LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAGEDPTP-ALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAEKIAVVCPKACVGIITNPVNTTVPIAAEVLKKAGVYDKRRLFGITTLDVIRSETFVAELKGKDPSDIRVPVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHESA (Malate dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=mdh PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.899e-49
Identity = 107/190 (56.32%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E +A  CP A V +I+NPVN+TV IAAEV KKAG YD  +L GVT LDV+R+ TF+AE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGIITNPVNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSETFIAELKGLNVADVKVNVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHEB9 (Malate dehydrogenase OS=Shewanella baltica (strain OS195) GN=mdh PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.899e-49
Identity = 106/190 (55.79%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E +A  CP A V +I+NPVN+TV IAAEV KKAG YD  +L G+T LDV+R+ TF+AE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSHLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAATCPTALVGIITNPVNTTVAIAAEVMKKAGVYDKNRLFGITTLDVIRSETFIAELKSLNVADVKVNVIGGHSGVTILPLLSQVE 190          
The following BLAST results are available for this feature:
BLAST of EY659430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 303
Match NameE-valueIdentityDescription
MDH_SHEPC4.044e-4956.32Malate dehydrogenase OS=Shewanella putrefaciens (s... [more]
MDH_SERP54.044e-4954.59Malate dehydrogenase OS=Serratia proteamaculans (s... [more]
MDH_SHESR5.282e-4956.32Malate dehydrogenase OS=Shewanella sp. (strain MR-... [more]
MDH_SHESM5.282e-4956.32Malate dehydrogenase OS=Shewanella sp. (strain MR-... [more]
MDH_SHEON5.282e-4956.32Malate dehydrogenase OS=Shewanella oneidensis GN=m... [more]
MDH_HAEIN5.282e-4957.37Malate dehydrogenase OS=Haemophilus influenzae GN=... [more]
MDH_VIBSL6.899e-4955.79Malate dehydrogenase OS=Vibrio splendidus (strain ... [more]
MDH_VIBPA6.899e-4955.79Malate dehydrogenase OS=Vibrio parahaemolyticus GN... [more]
MDH_SHESA6.899e-4956.32Malate dehydrogenase OS=Shewanella sp. (strain ANA... [more]
MDH_SHEB96.899e-4955.79Malate dehydrogenase OS=Shewanella baltica (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659430 ID=EY659430; Name=EY659430; organism=Citrus sinensis; type=EST; length=898bp
ATGTATCATTATTGATCACATTCACACCACCATACTTCAACAAAGAAAAT
GGAGTTTAGCTCAGAGGCTAATCAGCGCATTGCTAGAATCTCTGCTCATC
TTTACCCTCCAAATCTCCAGATGGAGGAGAATTCTTGCTTGAGGCAAGCT
AAATGCCGGGCAAAAGGCGGGGCAGCTGGATTCAAAGTAGCCATCTTGGG
TGCTGCTGGAGGCATTGGTCAACCCCTTGCAATGCTAATGAAGATAAACC
CCCTGGTCTCAGTCCTTCACCTCTATGATGTTGTCAATACCCCTGGTGTC
ACTGCTGATATTAGCCATATGGACACCGGCGCTGTGGTACGGGGTTTCCT
AGGCCAGCCACAGCTTGAGAATGCTCTCACAGGGGTGGACCTTGTCATTA
TCCCTGCCGGCGTTCCGAGGAAGCCTGGAATGACCAGGGATGATCTTTTC
AATATCAATGCTGGAATTGTCAGGACACTCTGTGAAGGCATCGCAAAGTG
TTGCCCCAATGCGACTGTCAATTTGATCAGTAATCCAGTGAACTCTACAG
TTCCTATTGCCGCAGAGGTTTTCAAGAAAGCTGGTACTTATGATCCAAAG
AAACTCTTGGGAGTTACAATGCTCGATGTCGTAAGAGCCAACACATTCGT
GGCGGAAGTTTTGGGACTTGATCCTANGGATGTTGATGTTCCTGTTGTTG
GAGGTCATGCTGGAGTAACAAATTTGCCACTTTTATCACAGGTTAAGCCT
CCTGTAGCTTACTCAAGAGAAACTGATACCTGACGAACGCATACAAATGG
TGGACAAANNTNNGTGAGCAAAGCTGGGGCTGGCTCTGCACACTCTCATG
GCTATGCAGCGGTTAAATTTGCGATCTGCCTCGTGGGCTGAAAGAAAG
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