EY659430

Overview
NameEY659430
Unique NameEY659430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHEFN (Malate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=mdh PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.177e-48
Identity = 106/190 (55.79%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   V+GF GQ   + AL G D+V++ AGV RKPGM R DLFNINAGIVR L E +A  CP A V +I+NPVN+TV IAAEV K AG YD  +L G+T LDV+R+ TF+AE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTDVEVKGFAGQDPTD-ALVGADVVLMSAGVARKPGMDRSDLFNINAGIVRNLMEKVAVTCPKALVGIITNPVNTTVAIAAEVLKNAGVYDKNRLFGITTLDVIRSETFIAELKGLNVADVKVNVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_MORS5 (Malate dehydrogenase OS=Moritella sp. (strain 5710) GN=mdh PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.537e-48
Identity = 104/190 (54.74%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   + GF G    + AL G D+V+I AGV RKPGM R DLFNINAGI++ L    A+ CPNA + +I+NPVN+TVPIAAEV K+AG YD +KL G+T LDV+R+ TFV+                 H+GVT LPLLSQVK
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSDLSLYDIAPVTPGVAVDLSHIPTDVTIAGFAGMDPTD-ALVGADVVLISAGVARKPGMDRSDLFNINAGIIKNLAGKCAEVCPNACIGIITNPVNTTVPIAAEVLKQAGVYDKRKLFGITTLDVIRSETFVSALKGISLADVEVPVIGGHSGVTILPLLSQVK 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_ERWT9 (Malate dehydrogenase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=mdh PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.537e-48
Identity = 106/198 (53.54%), Postives = 131/198 (66.16%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KV +LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   + GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGIVR L E +A  CP A + +I+NPVN+TV IAAEV KKAG YD  +L G+T LD++RAN FVAE                H+GVT LPLLSQV P V+++ +
Sbjct:    2 KVTVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTSVKIAGFSGEDATP-ALKGADVVLISAGVARKPGMDRSDLFNVNAGIVRNLIEQVAATCPKALIGIITNPVNTTVAIAAEVLKKAGVYDKNRLFGITTLDIIRANAFVAELKGKQPEEVNVPVIGGHSGVTILPLLSQV-PGVSFNEQ 197          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_AERHH (Malate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=mdh PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.537e-48
Identity = 107/190 (56.32%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIV+ L E  A  CP A + +I+NPVN+TV IAAEV KKAG YD ++L GVT LDV+RA TFVAE                H+GVT LPLLSQ++
Sbjct:    2 KVAVLGAAGGIGQALALLLKNRLPAGSELSLYDIAPVTPGVAVDLSHIPTDVKVKGFCGEDP-SPALVGADVVLISAGVARKPGMDRSDLFNINAGIVKNLVEKCAASCPKALIGIITNPVNTTVAIAAEVLKKAGVYDKRRLFGVTTLDVIRAETFVAEAKGLNVDKVRVNVIGGHSGVTILPLLSQIE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_ALISL (Malate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=mdh PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.007e-48
Identity = 107/190 (56.32%), Postives = 130/190 (68.42%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA++GAAGGIGQ LA+L+K   P  S L LYD+   TPGV AD+SH+ T   ++G+ G+     AL G D+V+I AGV RKPGM R DLFNINAGIV++L E IA  CP A + +I+NPVN+TV IAAEV KKAG YD  KL GVT LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYCGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVKSLAEKIAVTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKGKNPGEICVPVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_VIBFM (Malate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=mdh PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.621e-48
Identity = 107/190 (56.32%), Postives = 130/190 (68.42%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA++GAAGGIGQ LA+L+K   P  S L LYD+   TPGV AD+SH+ T   ++G+ G+     AL G D+V+I AGV RKPGM R DLFNINAGIV++L E IA  CP A + +I+NPVN+TV IAAEV KKAG YD  KL GVT LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYCGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVKSLTEKIAVTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKDKDPGEIRVPVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_VIBF1 (Malate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=mdh PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.621e-48
Identity = 107/190 (56.32%), Postives = 130/190 (68.42%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA++GAAGGIGQ LA+L+K   P  S L LYD+   TPGV AD+SH+ T   ++G+ G+     AL G D+V+I AGV RKPGM R DLFNINAGIV++L E IA  CP A + +I+NPVN+TV IAAEV KKAG YD  KL GVT LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYCGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVKSLTEKIAVTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKDKDPGEIRVPVIGGHSGVTILPLLSQVQ 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHEWM (Malate dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=mdh PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.621e-48
Identity = 110/198 (55.56%), Postives = 131/198 (66.16%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   V+GF GQ     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E  A  CP A + +I+NPVN+TV IAAEV K AG YD  +L GVT LDV+R+ TFVAE                H+GVT LPLLSQ++  V++S E
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPADSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAGQDP-SPALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLVEKCAATCPKALIGIITNPVNTTVAIAAEVLKAAGVYDKNRLFGVTTLDVIRSETFVAEAKGLNVADVNVNVIGGHSGVTILPLLSQIE-GVSFSDE 197          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_EDWI9 (Malate dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=mdh PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 107/196 (54.59%), Postives = 131/196 (66.84%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYS 765
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   V GF G+     AL G D+V+I AGV RKPGM R DLFN+NAGI+R L   +A+  PNA + +I+NPVN+ VPIAAEV KKAG Y+P KL GVT LD++R+NTFV E                H+GVT LPLLSQ+ P V+ S
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKVCGFGGE-DASPALVGADIVLISAGVARKPGMDRSDLFNVNAGIIRNLIGQVARTSPNACIGIITNPVNTMVPIAAEVLKKAGVYNPNKLFGVTTLDIIRSNTFVGELKHLDPATLDIPVIGGHSGVTILPLLSQI-PGVSLS 195          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHESH (Malate dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=mdh PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.472e-48
Identity = 109/198 (55.05%), Postives = 131/198 (66.16%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E  A  CP A + +I+NPVN+TV IAAEV K AG YD  +L GVT LDV+R+ TF+AE                H+GVT LPLLSQV+  V++S E
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLVEKCAAACPKALIGIITNPVNTTVAIAAEVLKAAGVYDKNRLFGVTTLDVIRSETFIAEAKGLNVDDVKINVIGGHSGVTILPLLSQVQ-GVSFSDE 197          
The following BLAST results are available for this feature:
BLAST of EY659430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 303
Match NameE-valueIdentityDescription
MDH_SHEFN1.177e-4855.79Malate dehydrogenase OS=Shewanella frigidimarina (... [more]
MDH_MORS51.537e-4854.74Malate dehydrogenase OS=Moritella sp. (strain 5710... [more]
MDH_ERWT91.537e-4853.54Malate dehydrogenase OS=Erwinia tasmaniensis (stra... [more]
MDH_AERHH1.537e-4856.32Malate dehydrogenase OS=Aeromonas hydrophila subsp... [more]
MDH_ALISL2.007e-4856.32Malate dehydrogenase OS=Aliivibrio salmonicida (st... [more]
MDH_VIBFM2.621e-4856.32Malate dehydrogenase OS=Vibrio fischeri (strain MJ... [more]
MDH_VIBF12.621e-4856.32Malate dehydrogenase OS=Vibrio fischeri (strain AT... [more]
MDH_SHEWM2.621e-4855.56Malate dehydrogenase OS=Shewanella woodyi (strain ... [more]
MDH_EDWI93.424e-4854.59Malate dehydrogenase OS=Edwardsiella ictaluri (str... [more]
MDH_SHESH4.472e-4855.05Malate dehydrogenase OS=Shewanella sediminis (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659430 ID=EY659430; Name=EY659430; organism=Citrus sinensis; type=EST; length=898bp
ATGTATCATTATTGATCACATTCACACCACCATACTTCAACAAAGAAAAT
GGAGTTTAGCTCAGAGGCTAATCAGCGCATTGCTAGAATCTCTGCTCATC
TTTACCCTCCAAATCTCCAGATGGAGGAGAATTCTTGCTTGAGGCAAGCT
AAATGCCGGGCAAAAGGCGGGGCAGCTGGATTCAAAGTAGCCATCTTGGG
TGCTGCTGGAGGCATTGGTCAACCCCTTGCAATGCTAATGAAGATAAACC
CCCTGGTCTCAGTCCTTCACCTCTATGATGTTGTCAATACCCCTGGTGTC
ACTGCTGATATTAGCCATATGGACACCGGCGCTGTGGTACGGGGTTTCCT
AGGCCAGCCACAGCTTGAGAATGCTCTCACAGGGGTGGACCTTGTCATTA
TCCCTGCCGGCGTTCCGAGGAAGCCTGGAATGACCAGGGATGATCTTTTC
AATATCAATGCTGGAATTGTCAGGACACTCTGTGAAGGCATCGCAAAGTG
TTGCCCCAATGCGACTGTCAATTTGATCAGTAATCCAGTGAACTCTACAG
TTCCTATTGCCGCAGAGGTTTTCAAGAAAGCTGGTACTTATGATCCAAAG
AAACTCTTGGGAGTTACAATGCTCGATGTCGTAAGAGCCAACACATTCGT
GGCGGAAGTTTTGGGACTTGATCCTANGGATGTTGATGTTCCTGTTGTTG
GAGGTCATGCTGGAGTAACAAATTTGCCACTTTTATCACAGGTTAAGCCT
CCTGTAGCTTACTCAAGAGAAACTGATACCTGACGAACGCATACAAATGG
TGGACAAANNTNNGTGAGCAAAGCTGGGGCTGGCTCTGCACACTCTCATG
GCTATGCAGCGGTTAAATTTGCGATCTGCCTCGTGGGCTGAAAGAAAG
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