EY659430

Overview
NameEY659430
Unique NameEY659430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHEPA (Malate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=mdh PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.472e-48
Identity = 107/190 (56.32%), Postives = 126/190 (66.32%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E  A  CP A + +I+NPVN+TV IAAEV K AG YD  +L GVT LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAGEDPTA-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLVEKCAATCPKALIGIITNPVNTTVAIAAEVLKNAGVYDKNRLFGVTTLDVIRSETFVAEAKGLNVADVKVPVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHEHH (Malate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=mdh PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.472e-48
Identity = 107/190 (56.32%), Postives = 126/190 (66.32%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+    PGV  D+SH+ T   V+GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E  A  CP A + +I+NPVN+TV IAAEV KKAG YD  +L GVT LDV+R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVIPGVAVDLSHIPTAVEVKGFAGEDPTA-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLVEKCAATCPKALIGIITNPVNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSETFVAEAKDLNVADVKVPVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHELP (Malate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=mdh PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.840e-48
Identity = 109/198 (55.05%), Postives = 131/198 (66.16%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E  A  CP A + +I+NPVN+TV IAAEV K AG YD  +L GVT LDV+R+ TFVAE                H+GVT LPLLSQ++  V++S E
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLVEKCAATCPKALIGIITNPVNTTVAIAAEVLKAAGVYDKNRLFGVTTLDVIRSETFVAEAKGLNVADVKVNVIGGHSGVTILPLLSQIE-GVSFSDE 197          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_ACTSZ (Malate dehydrogenase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=mdh PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.627e-48
Identity = 106/205 (51.71%), Postives = 135/205 (65.85%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRETDT*RTH 792
            KV +LGA+GGIGQPL++L+K++ P  S L LYDV   TPGV  DISH+ T   V GF G    E AL G D+V+I AGV RKPGMTR DLFN+NAGI++ L E +A+ CP A V +I+NPVNS +PIAAEV KKAG YD +KL G+T LD +R+  F+ +                H+GVT LPLLSQ+ P V ++ +     TH
Sbjct:    2 KVTLLGASGGIGQPLSLLLKLHLPAESDLSLYDVAPVTPGVAKDISHIPTSVEVEGFGGDDPSE-ALKGADIVLICAGVARKPGMTRADLFNVNAGIIQNLVEKVAQVCPQACVCIITNPVNSIIPIAAEVLKKAGVYDKRKLFGITTLDTIRSEKFIVQAKNIEINRNDISVIGGHSGVTILPLLSQI-PHVEFTEQELKDLTH 204          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_HAEPS (Malate dehydrogenase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=mdh PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.962e-48
Identity = 107/188 (56.91%), Postives = 127/188 (67.55%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQ 741
            KVA+LGAAGGIGQ LA+L+K+  P  + L LYD+   TPGV  D+SH+ T   V G+ G+     AL G +LV+I AGV RKPGM R DLFNINAGIVR L E +A  CP A V +I+NPVN+TV IAAEV KKAG YD +KL GVT LDV+R+ TFVAE                H+GVT LPLLSQ
Sbjct:    2 KVAVLGAAGGIGQALALLLKLQLPAGTNLALYDIAPVTPGVAVDVSHIPTAVKVVGYAGEDPTP-ALEGANLVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVATVCPTACVGIITNPVNTTVAIAAEVLKKAGVYDKRKLFGVTSLDVLRSETFVAELKGKDVNDVKVPVIGGHSGVTILPLLSQ 188          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_AERS4 (Malate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=mdh PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.301e-47
Identity = 105/190 (55.26%), Postives = 127/190 (66.84%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I AGV RKPGM R DLFNIN GIV+ L E  A  CP A + +I+NPVN+TV IAAEV KKAG YD ++L GVT LDV+RA TFVA+                H+GVT LPLLSQ++
Sbjct:    2 KVAVLGAAGGIGQALALLLKNRLPAGSELSLYDIAPVTPGVAVDLSHIPTDVKVKGFCGEDP-SPALVGADVVLISAGVARKPGMDRSDLFNINPGIVKNLVEKCAASCPKALIGIITNPVNTTVAIAAEVLKKAGVYDKRRLFGVTTLDVIRAETFVADAKGLNVDKVRVNVIGGHSGVTILPLLSQIE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_MORS2 (Malate dehydrogenase OS=Moritella sp. (strain 2D2) GN=mdh PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.457e-47
Identity = 102/190 (53.68%), Postives = 125/190 (65.79%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   + GF G      AL G D+V+I AGV RKPGM R DLFNINAGI++ L    A+ CP A + +I+NPVN+TVPIAAEV K+AG YD +KL G+T LDV+R+ TFV+                 H+G T LPLLSQVK
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTDVTITGFSGIDPTA-ALVGADVVLISAGVARKPGMDRSDLFNINAGIIKNLASKCAEVCPTACIGIITNPVNTTVPIAAEVLKQAGVYDKRKLFGITTLDVIRSETFVSALKGISLADVAVPVIGGHSGATILPLLSQVK 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_PHOPR (Malate dehydrogenase OS=Photobacterium profundum GN=mdh PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 8.433e-47
Identity = 102/190 (53.68%), Postives = 130/190 (68.42%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA++GAAGGIGQ LA+L+K   P  S L LYD+   TPGV AD+SH+ T   ++G+ G      AL G D+V+I AGV RKPGM R DLFN+NAGI+++L E IA  CP A V +I+NPVN+TV IAA+V KKAG YD ++L G+T LD++R+ TFVAE                H+GVT LPLLSQV+
Sbjct:    2 KVAVIGAAGGIGQALALLLKNGLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYGGVDPTP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIIKSLAEKIAVVCPKACVGIITNPVNTTVAIAADVLKKAGVYDKRRLFGITTLDIIRSETFVAELKGKTPSDIQVPVIGGHSGVTILPLLSQVE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_SHEPW (Malate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=mdh PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.438e-46
Identity = 105/190 (55.26%), Postives = 125/190 (65.79%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I AGV RKPGM R DLFNINAGIVR L E  A   P A + +I+NPVN+TV IAAEV KKAG YD  +L GVT LDV+R+ TFVA                 H+GVT LPLLSQ++
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTDVEVKGFAGEDPTA-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLVEKCAATSPKALIGIITNPVNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSETFVAAAKGLNVADVKVNVIGGHSGVTILPLLSQIE 190          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDH_PSEA6 (Malate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=mdh PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.438e-46
Identity = 104/190 (54.74%), Postives = 124/190 (65.26%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVK 747
            KVA+LGAAGGIGQ L++L+K   P  + L LYDV    PGV  D+SH+ T   V GF G+  L  ALTG D+V+IPAGVPRKPGM R DLFNINAGIVR L + +A  CP A + +I+NPVN+TV IAAE  K  G Y+  KL GVT LDV+RA TFV                  H+G T LPLLSQV+
Sbjct:    2 KVAVLGAAGGIGQALSLLLKTQLPAGTELALYDVAPVVPGVAVDLSHIPTDVKVEGF-GKDDLAKALTGSDIVLIPAGVPRKPGMDRSDLFNINAGIVRNLVDSVADNCPEACLCIITNPVNTTVAIAAEALKAKGVYNKNKLFGVTTLDVIRAETFVGNLRDLNPANVHVPVIGGHSGTTILPLLSQVE 190          
The following BLAST results are available for this feature:
BLAST of EY659430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 303
Match NameE-valueIdentityDescription
MDH_SHEPA4.472e-4856.32Malate dehydrogenase OS=Shewanella pealeana (strai... [more]
MDH_SHEHH4.472e-4856.32Malate dehydrogenase OS=Shewanella halifaxensis (s... [more]
MDH_SHELP5.840e-4855.05Malate dehydrogenase OS=Shewanella loihica (strain... [more]
MDH_ACTSZ7.627e-4851.71Malate dehydrogenase OS=Actinobacillus succinogene... [more]
MDH_HAEPS9.962e-4856.91Malate dehydrogenase OS=Haemophilus parasuis serov... [more]
MDH_AERS41.301e-4755.26Malate dehydrogenase OS=Aeromonas salmonicida (str... [more]
MDH_MORS26.457e-4753.68Malate dehydrogenase OS=Moritella sp. (strain 2D2)... [more]
MDH_PHOPR8.433e-4753.68Malate dehydrogenase OS=Photobacterium profundum G... [more]
MDH_SHEPW1.438e-4655.26Malate dehydrogenase OS=Shewanella piezotolerans (... [more]
MDH_PSEA61.438e-4654.74Malate dehydrogenase OS=Pseudoalteromonas atlantic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659430 ID=EY659430; Name=EY659430; organism=Citrus sinensis; type=EST; length=898bp
ATGTATCATTATTGATCACATTCACACCACCATACTTCAACAAAGAAAAT
GGAGTTTAGCTCAGAGGCTAATCAGCGCATTGCTAGAATCTCTGCTCATC
TTTACCCTCCAAATCTCCAGATGGAGGAGAATTCTTGCTTGAGGCAAGCT
AAATGCCGGGCAAAAGGCGGGGCAGCTGGATTCAAAGTAGCCATCTTGGG
TGCTGCTGGAGGCATTGGTCAACCCCTTGCAATGCTAATGAAGATAAACC
CCCTGGTCTCAGTCCTTCACCTCTATGATGTTGTCAATACCCCTGGTGTC
ACTGCTGATATTAGCCATATGGACACCGGCGCTGTGGTACGGGGTTTCCT
AGGCCAGCCACAGCTTGAGAATGCTCTCACAGGGGTGGACCTTGTCATTA
TCCCTGCCGGCGTTCCGAGGAAGCCTGGAATGACCAGGGATGATCTTTTC
AATATCAATGCTGGAATTGTCAGGACACTCTGTGAAGGCATCGCAAAGTG
TTGCCCCAATGCGACTGTCAATTTGATCAGTAATCCAGTGAACTCTACAG
TTCCTATTGCCGCAGAGGTTTTCAAGAAAGCTGGTACTTATGATCCAAAG
AAACTCTTGGGAGTTACAATGCTCGATGTCGTAAGAGCCAACACATTCGT
GGCGGAAGTTTTGGGACTTGATCCTANGGATGTTGATGTTCCTGTTGTTG
GAGGTCATGCTGGAGTAACAAATTTGCCACTTTTATCACAGGTTAAGCCT
CCTGTAGCTTACTCAAGAGAAACTGATACCTGACGAACGCATACAAATGG
TGGACAAANNTNNGTGAGCAAAGCTGGGGCTGGCTCTGCACACTCTCATG
GCTATGCAGCGGTTAAATTTGCGATCTGCCTCGTGGGCTGAAAGAAAG
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