Homology
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS7_ACECL (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Acetabularia cliftonii GN=RBCS-7 PE=3 SV=1)
HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29
Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 3
Query: 216 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 578
M VW P K FET SYLPPL+DE + K++ Y+L + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +QVL ++ K +P +++R++ FD RQVQ FL +PP
Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQVQICGFLVHRPP 170
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS4_ACEAT (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia acetabulum GN=RBCS-4 PE=2 SV=1)
HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29
Identity = 63/152 (41.45%), Postives = 87/152 (57.24%), Query Frame = 3
Query: 141 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 578
+A P + S +N R M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +QVL E+ +P +++R++ FD RQVQ FL +PP
Sbjct: 20 AATPKVVTSKRSFASTVANKNRE--MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS2_ACEAT (Ribulose bisphosphate carboxylase small chain 2, chloroplastic (Fragment) OS=Acetabularia acetabulum GN=RBCS-2 PE=2 SV=1)
HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29
Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 3
Query: 216 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 578
M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP
Sbjct: 34 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 160
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS1_ACEAT (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Acetabularia acetabulum GN=RBCS-1 PE=2 SV=1)
HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29
Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 3
Query: 216 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 578
M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP
Sbjct: 43 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS5_ACEAT (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia acetabulum GN=RBCS-5 PE=2 SV=1)
HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28
Identity = 58/127 (45.67%), Postives = 79/127 (62.20%), Query Frame = 3
Query: 216 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 578
M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +QVL E+ +P +++R++ FD RQVQ FL +PP
Sbjct: 44 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPP 170
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS1_ACECL (Ribulose bisphosphate carboxylase small chain 1 (Fragment) OS=Acetabularia cliftonii GN=RBCS-1 PE=2 SV=1)
HSP 1 Score: 112.849 bits (281), Expect = 2.289e-24
Identity = 51/112 (45.54%), Postives = 72/112 (64.29%), Query Frame = 3
Query: 261 SYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 578
SYLPPL+DE + K++ Y+L + W PCLEF ++ + ++ G Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP
Sbjct: 2 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 113
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS_PROHO (Ribulose bisphosphate carboxylase small chain OS=Prochlorothrix hollandica GN=cbbS PE=3 SV=1)
HSP 1 Score: 104.76 bits (260), Expect = 6.233e-22
Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 575
+++ETLSYLPPLSD+ + ++I Y++R G+IP +EF + YWTMWKLP++ T +VL EV E + EYP+ ++R++GFDN +Q Q +SF+ KP
Sbjct: 8 RRYETLSYLPPLSDQQIARQIEYMVREGYIPAVEFNEDSDATTC------------YWTMWKLPLFHATSTQEVLGEVRECRTEYPNCYIRVVGFDNIKQCQSVSFIVHKP 106
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS_SYNP2 (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=cbbS PE=3 SV=1)
HSP 1 Score: 102.064 bits (253), Expect = 4.040e-21
Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 575
K++ETLSYLPPLSD+ + +++ Y++ G+IP +EFE K HH WT+WKLP++ + A +VL EV E + EY ++R++GFDN +Q Q +SF+ KP
Sbjct: 8 KRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFE--KDPTPELHH----------WTLWKLPLFNASSAQEVLNEVRECRSEYSDCYIRVVGFDNIKQCQTVSFIVYKP 106
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS_SYNY3 (Ribulose bisphosphate carboxylase small chain OS=Synechocystis sp. (strain PCC 6803) GN=cbbS PE=3 SV=1)
HSP 1 Score: 101.293 bits (251), Expect = 6.891e-21
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 575
+++ETLSYLPPL+D+ + K++ +LL G+IP +EFE + E H +WTMWKLP +G A +VL EV E + E P+ ++R+IGFDN +Q Q +SF+ KP
Sbjct: 8 RRYETLSYLPPLTDQQIAKQVEFLLDQGFIPGVEFEEDP---QPETH---------FWTMWKLPFFGGATANEVLAEVRECRSENPNCYIRVIGFDNIKQCQTVSFIVHKP 106
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS_SYNP6 (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=cbbS PE=1 SV=3)
HSP 1 Score: 100.908 bits (250), Expect = 9.001e-21
Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 575
++FET SYLPPLSD + +I Y++ G+ P +EF HS+P + YWTMWKLP++ C QVL EV E + EY ++R+ GFDN +Q Q +SF+ +P
Sbjct: 10 RRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFN---------EHSNPEEF---YWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRP 108
The following BLAST results are available for this feature:
BLAST of EY659414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 127
100 200 300 400 500 600 700 800 Expect = 6.88e-29 / Id = 46.46 Expect = 6.88e-29 / Id = 41.45 Expect = 6.88e-29 / Id = 46.46 Expect = 6.88e-29 / Id = 46.46 Expect = 2.61e-28 / Id = 45.67 Expect = 2.29e-24 / Id = 45.54 Expect = 6.23e-22 / Id = 42.34 Expect = 4.04e-21 / Id = 42.34 Expect = 6.89e-21 / Id = 44.14 Expect = 9.00e-21 / Id = 42.34 Sequence RBS7_ACECL RBS4_ACEAT RBS2_ACEAT RBS1_ACEAT RBS5_ACEAT RBS1_ACECL RBS_PROHO RBS_SYNP2 RBS_SYNY3 RBS_SYNP6
Match Name E-value Identity Description
RBS7_ACECL 6.876e-29 46.46 Ribulose bisphosphate carboxylase small chain 7, c... [more]
RBS4_ACEAT 6.876e-29 41.45 Ribulose bisphosphate carboxylase small chain 4, c... [more]
RBS2_ACEAT 6.876e-29 46.46 Ribulose bisphosphate carboxylase small chain 2, c... [more]
RBS1_ACEAT 6.876e-29 46.46 Ribulose bisphosphate carboxylase small chain 1, c... [more]
RBS5_ACEAT 2.613e-28 45.67 Ribulose bisphosphate carboxylase small chain 5, c... [more]
RBS1_ACECL 2.289e-24 45.54 Ribulose bisphosphate carboxylase small chain 1 (F... [more]
RBS_PROHO 6.233e-22 42.34 Ribulose bisphosphate carboxylase small chain OS=P... [more]
RBS_SYNP2 4.040e-21 42.34 Ribulose bisphosphate carboxylase small chain OS=S... [more]
RBS_SYNY3 6.891e-21 44.14 Ribulose bisphosphate carboxylase small chain OS=S... [more]
RBS_SYNP6 9.001e-21 42.34 Ribulose bisphosphate carboxylase small chain OS=S... [more]
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