Homology
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS_ANASP (Ribulose bisphosphate carboxylase small chain OS=Anabaena sp. (strain PCC 7120) GN=cbbS PE=3 SV=1)
HSP 1 Score: 97.4413 bits (241), Expect = 9.951e-20
Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 575
+++ETLSYLPPL+D + K++ Y+L G+IP +EF S P YWT+WKLP++G + +VL EV + +YP ++R++GFDN +Q Q +SF+ KP
Sbjct: 8 RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFN---------EVSEPTEL---YWTLWKLPLFGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKP 106
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS_CYAPA (Ribulose bisphosphate carboxylase small chain OS=Cyanophora paradoxa GN=rbcS PE=3 SV=1)
HSP 1 Score: 94.7449 bits (234), Expect = 6.450e-19
Identity = 41/111 (36.94%), Postives = 69/111 (62.16%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 575
+KFET SYLPPL+D+ + +++ Y L +G+ P +EF S G + WT+WKLP++G +VL E+ ++++P++++R++ FD+ RQVQ + FL KP
Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEF------------SFTGKAEDLVWTLWKLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFLVYKP 105
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS2_THIFE (Ribulose bisphosphate carboxylase small chain 2 OS=Thiobacillus ferrooxidans GN=cbbS2 PE=3 SV=1)
HSP 1 Score: 92.0485 bits (227), Expect = 4.181e-18
Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = 3
Query: 246 KFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 563
KFETLSYLP L+ + + ++++Y++ GW P +E H+ P G YW MWKLPM+G TD +LKE K PH+ VRI+G+DN +Q Q S +
Sbjct: 18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVE------------HTEPENAFGNYWYMWKLPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQGTSLV 111
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS_PSEHY (Ribulose bisphosphate carboxylase small chain OS=Pseudomonas hydrogenothermophila GN=cbbS PE=3 SV=1)
HSP 1 Score: 87.4261 bits (215), Expect = 1.030e-16
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 575
K+FET SYLP +S E + K+I Y++ GW P +E H P YW MWKLPM+G TD +++ E+ ++ P+ +++IG+DN RQ Q + L +P
Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE------------HCEPENAILHYWYMWKLPMFGETDVDKIIAEIEACKRSNPNHLIKLIGYDNIRQTQGTAMLVYRP 122
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS1_CHRVI (Ribulose bisphosphate carboxylase small chain 1 OS=Chromatium vinosum GN=cbbS1 PE=1 SV=4)
HSP 1 Score: 84.7297 bits (208), Expect = 6.675e-16
Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQ 542
+KFET SYLP + + + K++ Y++ GW P +E H+ P YW MWKLPM+G TD +LKE K +P++ VR+IGFDN Q
Sbjct: 17 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAIE------------HTEPENAFDHYWYMWKLPMFGETDIDTILKEAEACHKAHPNNHVRLIGFDNYAQ 104
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS_ALVHS (Ribulose bisphosphate carboxylase small chain OS=Alvinoconcha hessleri symbiotic bacterium GN=cbbS PE=3 SV=1)
HSP 1 Score: 83.5741 bits (205), Expect = 1.487e-15
Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 578
+KFET SYLP L E + K++ Y++ GW P +E H+ P YW MWKLPM+G TD +L E K +P VR+IG+DN Q Q + + + P
Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAVE------------HTEPENAFDHYWYMWKLPMFGETDVDAILAEAEACHKAHPSHHVRLIGYDNYAQSQGTAMVIFRGP 116
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS2_CHRVI (Ribulose bisphosphate carboxylase small chain 2 OS=Chromatium vinosum GN=cbbS2 PE=1 SV=1)
HSP 1 Score: 82.4185 bits (202), Expect = 3.313e-15
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 3
Query: 246 KFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 575
++ET SYLPPL+ E +L++I Y+L +GW LE H P YW MWK+P +G D +L E+ ++ YP VR++G+D Q + SFLA +P
Sbjct: 15 RYETFSYLPPLNREEILEQILYILDNGWNASLE------------HEHPDRAFEYYWPMWKMPFFGEQDPNVILTEIESCRRSYPDHHVRLVGYDTYAQSKGHSFLAHRP 112
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS_THIDA (Ribulose bisphosphate carboxylase small chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=cbbS PE=3 SV=1)
HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 548
+KFET SYLP ++ + K++ YL+ GW P +E H+ P + YW MWKLPM+G TD ++L E K P++ VR++G+DN Q Q
Sbjct: 17 RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIE------------HTEPEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQ 106
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS2_ACECL (Ribulose bisphosphate carboxylase small chain 2 (Fragment) OS=Acetabularia cliftonii GN=RBCS-2 PE=3 SV=1)
HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 3
Query: 387 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 578
S Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP
Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 73
BLAST of EY659414 vs. ExPASy Swiss-Prot
Match:
RBS1_HYDMR (Ribulose bisphosphate carboxylase small chain 1 OS=Hydrogenovibrio marinus GN=cbbS-1 PE=1 SV=1)
HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15
Identity = 42/110 (38.18%), Postives = 59/110 (53.64%), Query Frame = 3
Query: 243 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAK 572
+K ET SYLP ++ + + ++ Y++ GW P +E HS P YW MWKLPM+G TDA VL EV K P++ VR+IG+DN Q Q + L +
Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIE------------HSEPENAFSYYWYMWKLPMFGDTDANVVLAEVDACIKANPNNHVRLIGYDNYAQSQGANMLVKR 114
The following BLAST results are available for this feature:
BLAST of EY659414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 127
100 200 300 400 500 600 700 800 Expect = 9.95e-20 / Id = 40.54 Expect = 6.45e-19 / Id = 36.94 Expect = 4.18e-18 / Id = 41.51 Expect = 1.03e-16 / Id = 36.94 Expect = 6.67e-16 / Id = 40.00 Expect = 1.49e-15 / Id = 37.50 Expect = 3.31e-15 / Id = 37.27 Expect = 4.33e-15 / Id = 38.24 Expect = 4.33e-15 / Id = 53.13 Expect = 4.33e-15 / Id = 38.18 Sequence RBS_ANASP RBS_CYAPA RBS2_THIFE RBS_PSEHY RBS1_CHRVI RBS_ALVHS RBS2_CHRVI RBS_THIDA RBS2_ACECL RBS1_HYDMR
Match Name E-value Identity Description
RBS_ANASP 9.951e-20 40.54 Ribulose bisphosphate carboxylase small chain OS=A... [more]
RBS_CYAPA 6.450e-19 36.94 Ribulose bisphosphate carboxylase small chain OS=C... [more]
RBS2_THIFE 4.181e-18 41.51 Ribulose bisphosphate carboxylase small chain 2 OS... [more]
RBS_PSEHY 1.030e-16 36.94 Ribulose bisphosphate carboxylase small chain OS=P... [more]
RBS1_CHRVI 6.675e-16 40.00 Ribulose bisphosphate carboxylase small chain 1 OS... [more]
RBS_ALVHS 1.487e-15 37.50 Ribulose bisphosphate carboxylase small chain OS=A... [more]
RBS2_CHRVI 3.313e-15 37.27 Ribulose bisphosphate carboxylase small chain 2 OS... [more]
RBS_THIDA 4.327e-15 38.24 Ribulose bisphosphate carboxylase small chain OS=T... [more]
RBS2_ACECL 4.327e-15 53.13 Ribulose bisphosphate carboxylase small chain 2 (F... [more]
RBS1_HYDMR 4.327e-15 38.18 Ribulose bisphosphate carboxylase small chain 1 OS... [more]
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