EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:136..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSN_SALNS (Sulfate adenylyltransferase subunit 1 OS=Salmonella newport (strain SL254) GN=cysN PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.041e-29
Identity = 73/216 (33.80%), Postives = 121/216 (56.02%), Query Frame = 2
Query:  134 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 781
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP+S  EGDN+  +S N+ W+ GPTLL+ L+ ++  +    +P+R P+Q V +         G + +G +K G  +   PSG
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANMRWHSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSG 284          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: NODQ_RHIS3 (Bifunctional enzyme nodQ OS=Rhizobium sp. (strain N33) GN=nodQ PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29
Identity = 77/240 (32.08%), Postives = 128/240 (53.33%), Query Frame = 2
Query:   89 FEKEAAEMNKRSFK---------YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 781
            FE + A + + S K         +A ++D L+AERE+GITID+A   F T K    V D PGH  + +NM TG S AD A+++ID+  G          QTR H+++A  LG++ ++   NK+D     + +A ++ I +    + + +G+  + +  +P+S   GDN+  RS +++WY GPTL++ L+ ++  +   + P R P+Q V +         G V +G + PG  V    SG
Sbjct:   55 FEDQLAALERDSRKHGTTGDDIDFALLVDGLEAEREQGITIDVAYRFFATPKRKFIVADTPGHEQYTRNMATGASTADLAIVLIDARQGVLR-------QTRRHSIIASLLGIRHIVLAVNKIDLV--GFDQAVFERITESYRQFSRDLGF--QTIVPIPMSARYGDNVTSRSESMEWYSGPTLIEHLETVSVEEAVVELPFRFPVQYVNRPNLDFRGFAGTVASGSVAPGDEVVVAKSG 283          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_METI4 (Elongation factor Tu OS=Methylacidiphilum infernorum (isolate V4) GN=tuf PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29
Identity = 78/206 (37.86%), Postives = 115/206 (55.83%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            +DK   E+ERGITI+ A  ++E+ K +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D       K   + +  EV   L + G+  +K+P +    +   EGD   E++          L++A+DN I  P+RP D+P  +P++DV+ I G GTV  GRVE G LK
Sbjct:   50 IDKAPEEKERGITINTAHVEYESDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLELVELEVRELLNQYGFPGDKIPIIKGSALKALEGDPEYEKNI-------LELVEAMDNYIPIPERPKDQPFLMPIEDVFNIEGRGTVVTGRVERGTLK 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_ANATD (Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29
Identity = 91/257 (35.41%), Postives = 127/257 (49.42%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGP 775
            VN  T GH+ +    +   +     K  A   K  F     +DK   ERERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  + V  ++   NK+D           + +  EV   L K GY  ++VP V  S  +      +  N   Y+    L+DA+D  I  P+R  DKP  +P++DV+ I G GTV  GRVE G LK G    +V F P
Sbjct:   13 VNIGTIGHVDHGKTTLTAAIT----KVLALKGKAQFMAYDQIDKAPEERERGITINTAHVEYETDARHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVNVPYIVVFLNKVDMVD---DPELIELVEMEVRELLSKYGYPGDEVPIVKGSALKALESTSQDPNAPEYQCILELMDAVDKYIPTPQRDIDKPFLMPIEDVFSITGRGTVVTGRVERGTLKTGEEVEIVGFAP 255          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSN_SACD2 (Sulfate adenylyltransferase subunit 1 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cysN PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29
Identity = 74/207 (35.75%), Postives = 113/207 (54.59%), Query Frame = 2
Query:  134 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETG 739
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG+K ++   NKMD     YS+  ++ I +      K +G   E + FVP+S  +GDN++ +S N+ WY G +L++ L+++      + K  R P+Q V +      G  GTV  G V+ G
Sbjct:   76 ALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDMAIILIDARHGVMT-------QTRRHSFIASLLGIKHLVIAINKMDLV--DYSQETFESIKQAYGEVAKTLG--QENLYFVPMSALDGDNVVNKSENMPWYTGESLMEILESVQITGAKNLKDFRYPVQYVNRPHLNFRGFCGTVASGEVKVG 271          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSN_PSEA6 (Sulfate adenylyltransferase subunit 1 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=cysN PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29
Identity = 87/263 (33.08%), Postives = 138/263 (52.47%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFK---------YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG*Q 787
            +T  G L++     D ++I  +E + A + K S K          A ++D L +ERE+GITID+A   F T K    + D PGH  + +NM+TG S  D A++++D+      AG+    QTR H+ L   LG+K +I   NKMD    ++S+  Y+ I K+   + +++  +   + FVPIS  +GDN++ +S N  W++G TL+  L+NI      +    R P+Q V +         G V +G +K G  +T  PSG Q
Sbjct:   38 STLIGRLLH-----DSKMI--YEDQLAAITKDSKKSGTTGDKVDLALLVDGLASEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMVTGASTCDLAIILVDA-----RAGVKT--QTRRHSFLVSLLGIKHVIVAINKMDLM--EFSEEVYENIKKDYLVFSEQL--DIPDIQFVPISALDGDNVVNKSENTPWFEGSTLMKTLENIEIGNDANIDDFRFPVQYVNRPNLNFRGFAGTVVSGQIKKGDKITALPSGKQ 282          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSN_TERTT (Sulfate adenylyltransferase subunit 1 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=cysN PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29
Identity = 77/216 (35.65%), Postives = 116/216 (53.70%), Query Frame = 2
Query:  134 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 781
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G          QTR H+ +A  LG+K ++   NKMD    ++S++R++EI +      K +  NP ++ FVP+S  +GDN++  S    WY G +L+  L+ +      +    R P+Q V +         G V +GV+K G  V   PSG
Sbjct:   76 ALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARYG-------VQTQTRRHSYIASLLGIKHVVVAINKMDLV--EFSESRFEEIKQSYLDLSKSL--NPAELHFVPMSALDGDNVVNISERTPWYSGKSLMQILETVEIASDKNADDFRFPVQFVNRPNLNFRGFCGTVASGVVKVGDKVKALPSG 280          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_TROWT (Elongation factor Tu OS=Tropheryma whipplei (strain Twist) GN=tuf PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29
Identity = 90/251 (35.86%), Postives = 127/251 (50.60%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFE--------GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +    I R   E    N    +    +D    ER+RGITI+I+  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D      S     E+V+ EV   L   G++ E VP V +SG +        GD ++E    +D           ++I +P R  DKP  +P++DV+ I G GTV  GR E GVL
Sbjct:   13 VNIGTIGHVDHGKTTLTA-AISRVLSERLPSNTNVKQDFDAIDSAPEERQRGITINISHIEYETEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGAM-------AQTREHVLLAKQVGVPYLLVALNKADMV----SDEEILELVELEVRELLSNHGFDGENVPVVRVSGLKALEGDQKWGDAVMELMKAVD-----------ESIPDPVRDRDKPFLMPIEDVFTITGRGTVVTGRAERGVL 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_EHRCR (Elongation factor Tu OS=Ehrlichia chaffeensis (strain Arkansas) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29
Identity = 83/246 (33.74%), Postives = 125/246 (50.81%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +N  T GH+ +    +   +     K  +    +S KY  + DK   E+ RGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GVK ++   NK D       +     +  E+   L K GY  + +  V  S  +   + E + +  W  K   L++AL+ I+ P R  DKP  + ++DV+ I G GTV  GR+E GV++ G
Sbjct:    9 INVGTIGHVDHGKTTLTAALTTVLAKRLSGEGNKSVKYDEI-DKAPEEKARGITISTAHVEYETENRHYAHVDCPGHADYIKNMITGAAQMDAAILVVSATDGAMP-------QTREHILLAKQVGVKDIVVWMNKCDVVD---DEEMLSLVEMEIRELLSKYGYPGDDIDVVRGSAVKA--LEEETGSGVWSEKIMELMNALEKISLPTREKDKPFLMSIEDVFSIPGRGTVVTGRIERGVIRVG 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CAMHC (Elongation factor Tu OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=tuf PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29
Identity = 77/209 (36.84%), Postives = 116/209 (55.50%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 763
            +D    E+ERGITI  +  ++ET K +   +D PGH D++KNMITG +Q D A+L+I ST G          QTREH LLA  +GV  ++   NK D           + + +EV   LK+ G+  +++P +  S  +     +   + +W  K   L+DA+D+ I  PKR +DK   +P++D++ I G GTV  GRVE G++K G  V
Sbjct:   50 IDNAPEEKERGITIATSHIEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVIASTDGPM-------AQTREHILLARQVGVPYIVVFLNKTDMVD---DPELIELVEEEVKDLLKEYGFPGDEIPIIKGSALKALEEAKAGGDGEWSAKIMELMDAVDSYIPTPKRDTDKDFLMPIEDIFSISGRGTVVTGRVEKGIVKVGDTV 248          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_SALNS2.041e-2933.80Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
NODQ_RHIS33.482e-2932.08Bifunctional enzyme nodQ OS=Rhizobium sp. (strain ... [more]
EFTU_METI43.482e-2937.86Elongation factor Tu OS=Methylacidiphilum infernor... [more]
EFTU_ANATD3.482e-2935.41Elongation factor Tu OS=Anaerocellum thermophilum ... [more]
CYSN_SACD23.482e-2935.75Sulfate adenylyltransferase subunit 1 OS=Saccharop... [more]
CYSN_PSEA63.482e-2933.08Sulfate adenylyltransferase subunit 1 OS=Pseudoalt... [more]
CYSN_TERTT4.547e-2935.65Sulfate adenylyltransferase subunit 1 OS=Teredinib... [more]
EFTU_TROWT5.939e-2935.86Elongation factor Tu OS=Tropheryma whipplei (strai... [more]
EFTU_EHRCR5.939e-2933.74Elongation factor Tu OS=Ehrlichia chaffeensis (str... [more]
EFTU_CAMHC5.939e-2936.84Elongation factor Tu OS=Campylobacter hominis (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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