EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_RICAE (Elongation factor Tu OS=Rickettsia africae (strain ESF-5) GN=tuf PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.323e-28
Identity = 76/208 (36.54%), Postives = 114/208 (54.81%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +D    E+ERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK+D           + +  EV   L K G+  +++P +    +   EG    E++ N        L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G
Sbjct:   50 IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKIDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVG 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_NOVAD (Elongation factor Tu OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=tuf PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.323e-28
Identity = 82/226 (36.28%), Postives = 120/226 (53.10%), Query Frame = 2
Query:   95 KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEG--DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            K  AE     F     +DK   ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++++  G          QTREH LLA  +GV  ++   NK+D       +   + +  EV   L    +  + +P V    ++  EG  DN+ + S N        L+ A+D  I +P RP+DKP  +P++DV+ I G GTV  GR+ETG++K G
Sbjct:   34 KVLAEQGGAEFTDYANIDKAPEERERGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMP-------QTREHILLARQVGVPALVVYMNKVDQVD---DEEILELVELEVRELLSSYDFPGDDIPIVKGSALAALEGRDDNIGKDSIN-------ALMAAVDAYIPQPPRPTDKPFLMPVEDVFSISGRGTVVTGRIETGIIKVG 242          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSN_PSYIN (Sulfate adenylyltransferase subunit 1 OS=Psychromonas ingrahamii (strain 37) GN=cysN PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.323e-28
Identity = 82/245 (33.47%), Postives = 127/245 (51.84%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNK--RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETG 739
            +T  G L++    I +  +   EK++ + N     F  + ++D L++ERE+GITID+A   F T +    + D PGH  + +NM+TG S  D A+++ID+  G          QTR H+ +   LG+K ++   NKMDA    Y +A Y +I  +   + K++  N   + FVPIS  +GDN++  S N+ WY G  LL  L+ I      +DK  RL +Q V +      G  GTV  G +  G
Sbjct:   38 STLIGRLLFDSKMIFEDHMAAIEKDSKKFNTTDNDFDLSLLVDGLQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRNMVTGASTCDLAIILIDARYG-------VQVQTRRHSYICSLLGIKHLVVAVNKMDAV--DYDQAVYKKIKADYREFAKQL--NIADIRFVPISALKGDNVVNESENMTWYPGSPLLRLLNTIQIDTDINDK-FRLAVQYVNRPNLDFRGFCGTVASGEIRVG 270          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_RICHE (Elongation factor Tu OS=Rickettsia helvetica GN=tuf PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.728e-28
Identity = 76/208 (36.54%), Postives = 114/208 (54.81%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +D    E+ERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK+D           + +  EV   L K G+  +++P +    +   EG    E++ N        L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G
Sbjct:   50 IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPVIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVG 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CALS8 (Elongation factor Tu OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.728e-28
Identity = 90/257 (35.02%), Postives = 126/257 (49.03%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGP 775
            VN  T GH+ +    +   +     K  A   K  F     +DK   ERERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  + V  ++   NK+D           + +  EV   L K GY  ++VP V  S  +      +  N   Y+    L+D +D  I  P+R  DKP  +P++DV+ I G GTV  GRVE G LK G    +V F P
Sbjct:   13 VNIGTIGHVDHGKTTLTAAIT----KVLALKGKAQFMAYDQIDKAPEERERGITINTAHVEYETDARHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVNVPYIVVFLNKVDMVD---DPELIELVEMEVRELLSKYGYPGDEVPIVKGSALKALESPSQDPNAPEYQCILELMDVVDKYIPTPQRDVDKPFLMPIEDVFSITGRGTVVTGRVERGTLKTGEEVEIVGFAP 255          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_ARTAT (Elongation factor Tu OS=Arthrobacter aurescens (strain TC1) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.728e-28
Identity = 86/248 (34.68%), Postives = 130/248 (52.42%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +   + +    +  ++N+ R F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   D +  EV   L   G++ ++ P V +SG    EGD +        W K    L+ A+D ++ +P R  DKP  +P++DV+ I G GTV  GR E G L
Sbjct:   13 VNIGTIGHVDHGKTTLTAAISKVLYDQYPDLNEQRDFAS---IDSAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKSDMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGDPV--------WVKSVQDLMAAVDESVPDPVRDRDKPFLMPIEDVFTITGRGTVVTGRAERGTL 239          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU2_MYXXD (Elongation factor Tu 2 OS=Myxococcus xanthus (strain DK 1622) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.728e-28
Identity = 82/249 (32.93%), Postives = 132/249 (53.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   +     K  A+    +F    ++DK   ERERGITI  +  +++T+  +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D       +   + +  EV   LKK  +  + +P +P   +   EGD     ++++       L++A+D+ I  P+R +DKP  +P++DV+ I G GTV  GRVE G++K G
Sbjct:   13 VNIGTIGHVDHGKTSLTAAIT----KVLAKTGGATFLAYDLIDKAPEERERGITISTSHVEYQTSNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDDIPIIPGSALKALEGD-----TSDIGEPAILKLMEAVDSYIPTPQRATDKPFLMPVEDVFSISGRGTVATGRVERGIIKVG 242          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU1_MYXXD (Elongation factor Tu 1 OS=Myxococcus xanthus (strain DK 1622) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.728e-28
Identity = 82/249 (32.93%), Postives = 132/249 (53.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   +     K  A+    +F    ++DK   ERERGITI  +  +++T+  +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D       +   + +  EV   LKK  +  + +P +P   +   EGD     ++++       L++A+D+ I  P+R +DKP  +P++DV+ I G GTV  GRVE G++K G
Sbjct:   13 VNIGTIGHVDHGKTSLTAAIT----KVLAKTGGATFLAYDLIDKAPEERERGITISTSHVEYQTSNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDDIPIIPGSALKALEGD-----TSDIGEPAILKLMEAVDSYIPTPQRATDKPFLMPVEDVFSISGRGTVATGRVERGIIKVG 242          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSN_SODGM (Sulfate adenylyltransferase subunit 1 OS=Sodalis glossinidius (strain morsitans) GN=cysN PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.728e-28
Identity = 79/254 (31.10%), Postives = 127/254 (50.00%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 781
            +T  G L++    I +  +     ++  +  +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID   G  +       QTR H+ ++  LG++ ++   NKMD     + +  +  I ++   + +++  + + + FVP+S  EGDN+      + WY GPTLLD L+ +        +P R P+Q V +         G V  GVL+ G  V   PSG
Sbjct:   41 STLIGRLLHDTRQIYEDQLSTLHTDSKRLGTQGDKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDVAILLIDVRKGVLD-------QTRLHSFISTLLGIRHLVVAVNKMDLVA--FDEQIFQGIRQDYLRFAEQLPVDLD-ITFVPLSALEGDNVAALGKAMPWYNGPTLLDVLETVEVINLNEQQPARFPVQYVNRPNLDFRGYAGTVAAGVLRVGQAVKVLPSG 284          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_UREPA (Elongation factor Tu OS=Ureaplasma parvum GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 82/206 (39.81%), Postives = 115/206 (55.83%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            +DK   ERERGITI+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L+I ++ G          QT+EH LLA  +GV +++   NK D  T        D +  EV   L K G++ +  P +  SG    EGD + E        K   L+DA+D+ I  P+R +DKP  L ++DV+ I G GTV  GRVE GVLK
Sbjct:   50 VDKTPEERERGITINASHVEYETKTRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAASDGVM-------AQTKEHILLARQVGVPKIVVFLNKCDFMT---DPDMQDLVEMEVRELLSKYGFDGDNTPVIRGSGLKALEGDPVWEA-------KIDELMDAVDSWIPLPERSTDKPFLLAIEDVFTISGRGTVVTGRVERGVLK 238          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_RICAE1.323e-2836.54Elongation factor Tu OS=Rickettsia africae (strain... [more]
EFTU_NOVAD1.323e-2836.28Elongation factor Tu OS=Novosphingobium aromaticiv... [more]
CYSN_PSYIN1.323e-2833.47Sulfate adenylyltransferase subunit 1 OS=Psychromo... [more]
EFTU_RICHE1.728e-2836.54Elongation factor Tu OS=Rickettsia helvetica GN=tu... [more]
EFTU_CALS81.728e-2835.02Elongation factor Tu OS=Caldicellulosiruptor sacch... [more]
EFTU_ARTAT1.728e-2834.68Elongation factor Tu OS=Arthrobacter aurescens (st... [more]
EFTU2_MYXXD1.728e-2832.93Elongation factor Tu 2 OS=Myxococcus xanthus (stra... [more]
EFTU1_MYXXD1.728e-2832.93Elongation factor Tu 1 OS=Myxococcus xanthus (stra... [more]
CYSN_SODGM1.728e-2831.10Sulfate adenylyltransferase subunit 1 OS=Sodalis g... [more]
EFTU_UREPA2.257e-2839.81Elongation factor Tu OS=Ureaplasma parvum GN=tuf P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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