EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_UREP2 (Elongation factor Tu OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 82/206 (39.81%), Postives = 115/206 (55.83%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            +DK   ERERGITI+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L+I ++ G          QT+EH LLA  +GV +++   NK D  T        D +  EV   L K G++ +  P +  SG    EGD + E        K   L+DA+D+ I  P+R +DKP  L ++DV+ I G GTV  GRVE GVLK
Sbjct:   50 VDKTPEERERGITINASHVEYETKTRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAASDGVM-------AQTKEHILLARQVGVPKIVVFLNKCDFMT---DPDMQDLVEMEVRELLSKYGFDGDNTPVIRGSGLKALEGDPVWEA-------KIDELMDAVDSWIPLPERSTDKPFLLAIEDVFTISGRGTVVTGRVERGVLK 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_THEFY (Elongation factor Tu OS=Thermobifida fusca (strain YX) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 84/247 (34.01%), Postives = 130/247 (52.63%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +   + +    +  ++N   F     +DK   ERERGITI I+  +++T   +   +D PGH D++KNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D       +  +D +  EV   L +  +  ++VP + +S     EGD         +W K    L++A+D NI EP+R  DKP  +P++DV+ I G GTV  GR+E GV+
Sbjct:   13 VNIGTIGHIDHGKTTLTAAITKVLHDKYPDLNP--FTPFEDIDKAPEERERGITISISHVEYQTESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKSDMVD---DEEIFDLVELEVRELLNEYEFPGDEVPVIRVSALKALEGDP--------EWGKKILELMEAVDQNIPEPQRDIDKPFLMPIEDVFSITGRGTVVTGRIERGVI 239          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_THEAB (Elongation factor Tu OS=Thermosipho africanus (strain TCF52B) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 78/205 (38.05%), Postives = 112/205 (54.63%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +DK   E+ERGITI+I+  ++ET   +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  MI   NK D       +   D +  EV   L K  +  + +P V  S  +     +   +  +     LLD +D+   EP+R +DKP  +P++DV+ I G GTV  GR+E GV++PG
Sbjct:   50 IDKAPEEKERGITINISHIEYETETRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVNVPAMIVFINKTDMVD---DEELIDLVEMEVRELLNKYEFPGDDLPVVRGSALKAVEGPDDPNDPVYAPIKELLDTMDSYFPEPQRETDKPFLMPVEDVFSITGRGTVVTGRIERGVIRPG 244          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_SPHWW (Elongation factor Tu OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 88/250 (35.20%), Postives = 131/250 (52.40%), Query Frame = 2
Query:   23 NATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDN-MIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            N  T GH+ +    +   +     K  AE    +F     +DK   ERERGITI  A  ++ET + +   +D PGH D++KNMITG +Q D  +L++ +T G          QTREH LLA  +GV  ++   NK+D        A   E+V+ EV   L    +  + +P +    +   +G N  I R+  L+      L+ A+D+ I +P+RP DKP  +P++DV+ I G GTV  GRVETG++K G
Sbjct:   14 NIGTIGHVDHGKTSLTAAIT----KVLAETGGATFVDYANIDKAPEERERGITISTAHVEYETEQRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMP-------QTREHILLARQVGVPALVVFMNKVDLV----DDAEILELVELEVRELLSSYEFPGDDIPVIKGSAVKALDGTNDEIGRNAVLE------LMAAVDSYIPQPERPLDKPFLMPIEDVFSISGRGTVVTGRVETGMVKVG 242          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_RICM5 (Elongation factor Tu OS=Rickettsia massiliae (strain Mtu5) GN=tuf PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 76/208 (36.54%), Postives = 113/208 (54.33%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +D    E+ERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK+D           + +  EV   L K G+  +++P +    +   EG    E + N        L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G
Sbjct:   50 IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQALEGKPEGEEAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVG 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_KOCRD (Elongation factor Tu OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 82/247 (33.20%), Postives = 129/247 (52.23%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            +N  T GH+ +    +   + +    +  ++N++  +    +D    E++RGITI+IA  +++T K +   +DAPGH D++KNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   D +  EV   L   G++ +  P V +S     EGD          W K    L++A+D N+ +P R +DKP  +P++DV+ I G GTV  GR E G L
Sbjct:   13 LNIGTIGHVDHGKTTLTAAISKVLADKYPDVNEQ--RDFGAIDSAPEEKQRGITINIAHIEYQTDKRHYAHVDAPGHADYVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKSDMVD---DEELLDLVEMEVRELLSDQGFDGDNAPVVRVSALKALEGD--------AQWVKSVEDLMEAVDENVPDPVRDTDKPFLMPIEDVFTITGRGTVVTGRAERGTL 239          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_DESHY (Elongation factor Tu OS=Desulfitobacterium hafniense (strain Y51) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 76/206 (36.89%), Postives = 113/206 (54.85%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +DK   ERERGITI  +  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D           + +  E+   L +  +  + +P +P SG +       S + +W  K   L+DA+D+ I  P+R +DKP  +P++DV+ I G GTV  GRVE GV+K G
Sbjct:   50 IDKAPEERERGITISTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVWLNKADMVD---DPELMELVEMEIRELLSEYEFPGDDIPIIPGSGLKALQCGCGSRDCEWCGKIWNLMDAVDSYIPTPERATDKPFLMPVEDVFTITGRGTVATGRVERGVIKVG 245          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_DESHD (Elongation factor Tu OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 76/206 (36.89%), Postives = 113/206 (54.85%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +DK   ERERGITI  +  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D           + +  E+   L +  +  + +P +P SG +       S + +W  K   L+DA+D+ I  P+R +DKP  +P++DV+ I G GTV  GRVE GV+K G
Sbjct:   50 IDKAPEERERGITISTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVWLNKADMVD---DPELMELVEMEIRELLSEYEFPGDDIPIIPGSGLKALQCGCGSRDCEWCGKIWNLMDAVDSYIPTPERATDKPFLMPVEDVFTITGRGTVATGRVERGVIKVG 245          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CHLP8 (Elongation factor Tu OS=Chlorobaculum parvum (strain NCIB 8327) GN=tuf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 77/208 (37.02%), Postives = 114/208 (54.81%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +DK   ERERGITI  A  +++T K +   ID PGH D+IKNMITG +Q D A+L++  T G          QTREH LLA  + V  ++   NK+D   P+      + +  E+   L + G+  + +P +    ++   GD   E++          L+DA+D+ I EP R  DKP  +P++DV+ I G GTV  GR+E G++K G
Sbjct:   50 IDKAPEERERGITISTAHVEYQTDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----LELVEMELRELLTEYGFPGDDIPIIKGSALNALNGDPEGEKAI-------MELMDAVDDYIPEPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGIIKVG 239          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_ANAMM (Elongation factor Tu OS=Anaplasma marginale (strain St. Maries) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 87/246 (35.37%), Postives = 124/246 (50.41%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +N  T GH+ +    +   +     +  +  NK   KY  + DK   ER RGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GVK ++   NK D       +     +  EV   L   GY+ + V  V  S  +    +E S++  W  K   L+ AL+ I  P R  DKP  + ++DV+ I G GTV  GR+E GV+K G
Sbjct:    9 INVGTIGHVDHGKTTLTAALTTVLTRRLSGANK-VVKYDEI-DKAPEERARGITISTAHVEYETEGRHYAHVDCPGHADYIKNMITGAAQMDVAILVVSATDGAMP-------QTREHILLAKQVGVKDIVTWINKCDVVE---DEEMLSIVEMEVRELLSNYGYDGDGVDVVRGSAVKA---LEESSDGPWSEKIMELVGALEKIELPVREKDKPFLMSVEDVFSIPGRGTVVTGRIERGVIKVG 239          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_UREP22.257e-2839.81Elongation factor Tu OS=Ureaplasma parvum serovar ... [more]
EFTU_THEFY2.257e-2834.01Elongation factor Tu OS=Thermobifida fusca (strain... [more]
EFTU_THEAB2.257e-2838.05Elongation factor Tu OS=Thermosipho africanus (str... [more]
EFTU_SPHWW2.257e-2835.20Elongation factor Tu OS=Sphingomonas wittichii (st... [more]
EFTU_RICM52.257e-2836.54Elongation factor Tu OS=Rickettsia massiliae (stra... [more]
EFTU_KOCRD2.257e-2833.20Elongation factor Tu OS=Kocuria rhizophila (strain... [more]
EFTU_DESHY2.257e-2836.89Elongation factor Tu OS=Desulfitobacterium hafnien... [more]
EFTU_DESHD2.257e-2836.89Elongation factor Tu OS=Desulfitobacterium hafnien... [more]
EFTU_CHLP82.257e-2837.02Elongation factor Tu OS=Chlorobaculum parvum (stra... [more]
EFTU_ANAMM2.257e-2835.37Elongation factor Tu OS=Anaplasma marginale (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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