EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_RICMO (Elongation factor Tu OS=Rickettsia montana GN=tuf PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28
Identity = 75/208 (36.06%), Postives = 113/208 (54.33%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +D    E+ERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK+D           + +  EV   L K G+  +++P +    +   EG    E++ N        L+DA+D+ I +P R +DKP  +P++DV+ I G  TV  GRVE+G++K G
Sbjct:   50 IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DSDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRSTVVTGRVESGIIKVG 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_PROVI (Elongation factor Tu OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=tuf PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28
Identity = 77/206 (37.38%), Postives = 112/206 (54.37%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            +DK   ERERGITI  A  +++T K +   ID PGH D+IKNMITG +Q D A+L++  T G          QTREH LLA  + V  ++   NK+D   P+      + +  E+   L + G+  + +P +    +   +GD   E++          L+DA+DN I EP R  DKP  +P++DV+ I G GTV  GR+E G +K
Sbjct:   50 IDKAPEERERGITISTAHVEYQTVKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----LELVEMELRELLTEYGFPGDDIPIIKGSALKALDGDAEGEKAI-------MELMDAVDNYIPEPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGRIK 237          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_LAWIP (Elongation factor Tu OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=tuf PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28
Identity = 79/205 (38.54%), Postives = 112/205 (54.63%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +DK   E+ERGITI  A  ++ET K +   +D PGH D+IKNMITG +Q D A++++ +T G          QTREH LLA  +GV  ++   NK D           + +  E+   L   GY  + VP +  S  +  N  + + + D      LLDA D+ I +P+R  DKP  +P++DV+ I G GTV  GRVE GV+K G
Sbjct:   50 IDKAPEEKERGITIATAHVEYETPKRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYLVVFMNKCDMVD---DPELLELVELEIRELLSTYGYPGDDVPVIRGSALKALNS-DSADSDDAKPILELLDACDSYIPDPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVG 243          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_LACDB (Elongation factor Tu OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=tuf PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28
Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +D    E+ERGITI+ A  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D           D +  EV   L + GY  + VP V    +   EGD   ++       K   L+D +D  I  P+R +DKP  +P++DV+ I G GTV  GR++ G +K G
Sbjct:   51 IDAAPEEKERGITINTAHVEYETEKRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNSIVVFLNKCDLVD---DPELIDLVEMEVRDLLSEYGYPGDDVPVVRGSALKALEGDEEAQK-------KIEELMDVVDEYIPTPERETDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVG 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_LACDA (Elongation factor Tu OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=tuf PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28
Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +D    E+ERGITI+ A  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D           D +  EV   L + GY  + VP V    +   EGD   ++       K   L+D +D  I  P+R +DKP  +P++DV+ I G GTV  GR++ G +K G
Sbjct:   51 IDAAPEEKERGITINTAHVEYETEKRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNSIVVFLNKCDLVD---DPELIDLVEMEVRDLLSEYGYPGDDVPVVRGSALKALEGDEEAQK-------KIEELMDVVDEYIPTPERETDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVG 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_ACICJ (Elongation factor Tu OS=Acidiphilium cryptum (strain JF-5) GN=tuf PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28
Identity = 83/245 (33.88%), Postives = 124/245 (50.61%), Query Frame = 2
Query:   23 NATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            N  T GH+ +    +   +     K  AE    +F+    +D    ER RGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NKMD   P       + +  EV   L K  +  + +P   I G     + + +  L       L++A+D+ I +P+RP DKP  +P++DV+ I G GTV  GRVE G++K G
Sbjct:   14 NIGTIGHVDHGKTSLTAAIT----KVLAESGGATFRAYDSIDAAPEERARGITIATAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKMDMADPDL----VELVEMEVRDLLSKYEFPGDDIPI--IKGSALCALEDSNAELGREAILKLMEAVDSYIPQPERPKDKPFLMPVEDVFSISGRGTVVTGRVERGIIKVG 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU2_BARQU (Elongation factor Tu 2 OS=Bartonella quintana GN=tuf2 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28
Identity = 86/247 (34.82%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   + + F +         FK    +D    ER RGITI  A  ++ET K +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D    +   A   E+V+ E+   L K  +  + +P V  S        ++S   D  +   L+  +DN I  P+RP D+P  LP++DV+ I G GTV  GRVE GV+K G
Sbjct:   13 VNIGTIGHVDHGKTSLTAAITKYFGE---------FKAYDQIDAAPEERARGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKVD----QVDDAELLELVELEIRELLSKYDFPGDDIPIVKGSALAALEDKDKSIGEDAVR--LLMSEVDNYIPTPERPIDQPFLLPIEDVFSISGRGTVVTGRVERGVIKVG 237          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU1_BARQU (Elongation factor Tu 1 OS=Bartonella quintana GN=tuf1 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28
Identity = 86/247 (34.82%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   + + F +         FK    +D    ER RGITI  A  ++ET K +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D    +   A   E+V+ E+   L K  +  + +P V  S        ++S   D  +   L+  +DN I  P+RP D+P  LP++DV+ I G GTV  GRVE GV+K G
Sbjct:   13 VNIGTIGHVDHGKTSLTAAITKYFGE---------FKAYDQIDAAPEERARGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKVD----QVDDAELLELVELEIRELLSKYDFPGDDIPIVKGSALAALEDKDKSIGEDAVR--LLMSEVDNYIPTPERPVDQPFLLPIEDVFSISGRGTVVTGRVERGVIKVG 237          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSN_ALTMD (Sulfate adenylyltransferase subunit 1 OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=cysN PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28
Identity = 81/254 (31.89%), Postives = 134/254 (52.76%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 781
            +T  G L++    I +  +    K++ ++     K   A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM+TG S  D A++++D+  GG +       QT+ H+ L   LG+K +I   NKMD     YS+  Y +I ++   + +++  +   + FVPIS  EGDN++ +S    W+ G  L++ L+NI   +  + +  R P+Q V +         G V +G + PG  VT  PSG
Sbjct:   38 STLIGRLLHDSKMIYEDQLAAITKDSKKVGTTGEKVDLALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMVTGASTCDLAIILVDA-RGGVKV------QTKRHSFLVSLLGIKHVIVAINKMDLM--DYSEEVYKQIQEDYLKFAEQL--DIPDIQFVPISALEGDNVVGKSEKTPWFDGTPLMEMLENIEIGEDDNLEDFRFPVQYVNRPNLDFRGFAGTVVSGQVAPGDEVTALPSG 280          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_MICLU (Elongation factor Tu OS=Micrococcus luteus GN=tuf PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.566e-28
Identity = 84/249 (33.73%), Postives = 127/249 (51.00%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   + +    +  ++N+ R F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L    ++ ++ P +    +   EGD          W K    L+DA+D  I +P R  DKP  +P++DV+ I G GTV  GR E G LK
Sbjct:   13 VNIGTIGHVDHGKTTLTAAISKVLYDKYPDLNEARDFA---TIDSAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPALLVALNKSDMVE---DEELLERVEMEVRQLLSSRSFDVDEAPVIRTSALKALEGDP--------QWVKSVEDLMDAVDEYIPDPVRDKDKPFLMPIEDVFTITGRGTVVTGRAERGTLK 240          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_RICMO5.028e-2836.06Elongation factor Tu OS=Rickettsia montana GN=tuf ... [more]
EFTU_PROVI5.028e-2837.38Elongation factor Tu OS=Prosthecochloris vibriofor... [more]
EFTU_LAWIP5.028e-2838.54Elongation factor Tu OS=Lawsonia intracellularis (... [more]
EFTU_LACDB5.028e-2837.98Elongation factor Tu OS=Lactobacillus delbrueckii ... [more]
EFTU_LACDA5.028e-2837.98Elongation factor Tu OS=Lactobacillus delbrueckii ... [more]
EFTU_ACICJ5.028e-2833.88Elongation factor Tu OS=Acidiphilium cryptum (stra... [more]
EFTU2_BARQU5.028e-2834.82Elongation factor Tu 2 OS=Bartonella quintana GN=t... [more]
EFTU1_BARQU5.028e-2834.82Elongation factor Tu 1 OS=Bartonella quintana GN=t... [more]
CYSN_ALTMD5.028e-2831.89Sulfate adenylyltransferase subunit 1 OS=Alteromon... [more]
EFTU_MICLU6.566e-2833.73Elongation factor Tu OS=Micrococcus luteus GN=tuf ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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